Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr9P14570_001 | Banana | nucleus | 68.93 | 53.99 |
| GSMUA_Achr3P06190_001 | Banana | nucleus | 61.16 | 44.52 |
| GSMUA_Achr9P18360_001 | Banana | nucleus | 56.8 | 41.34 |
| GSMUA_Achr8P25940_001 | Banana | nucleus | 56.8 | 40.77 |
| VIT_14s0066g01440.t01 | Wine grape | nucleus | 48.54 | 36.63 |
| AT3G01470.1 | Thale cress | nucleus | 47.57 | 36.03 |
| Bra039116.1-P | Field mustard | nucleus | 45.15 | 35.77 |
| CDY37519 | Canola | nucleus | 45.15 | 35.77 |
| Solyc02g086930.2.1 | Tomato | nucleus | 49.03 | 35.44 |
| PGSC0003DMT400001322 | Potato | nucleus | 48.54 | 35.09 |
| CDY49056 | Canola | nucleus | 44.66 | 34.98 |
| CDY28673 | Canola | nucleus | 45.63 | 34.56 |
| KRH20316 | Soybean | nucleus | 47.57 | 34.39 |
| Bra040519.1-P | Field mustard | nucleus | 45.15 | 33.94 |
| KRG93337 | Soybean | nucleus | 43.69 | 33.71 |
| GSMUA_Achr10P... | Banana | nucleus | 26.7 | 28.95 |
| GSMUA_Achr7P20950_001 | Banana | nucleus | 32.52 | 28.39 |
| GSMUA_Achr6P36450_001 | Banana | nucleus | 31.55 | 28.02 |
| GSMUA_Achr7P12740_001 | Banana | nucleus | 30.58 | 27.63 |
| GSMUA_Achr7P11600_001 | Banana | nucleus | 34.47 | 25.72 |
| GSMUA_Achr7P09730_001 | Banana | nucleus | 37.38 | 25.67 |
| GSMUA_Achr3P21430_001 | Banana | nucleus | 33.01 | 25.56 |
| GSMUA_Achr10P... | Banana | nucleus | 34.95 | 25.17 |
| GSMUA_Achr10P... | Banana | nucleus | 31.55 | 24.71 |
| GSMUA_Achr6P10310_001 | Banana | nucleus | 24.76 | 24.64 |
| GSMUA_Achr7P11760_001 | Banana | nucleus | 30.1 | 24.6 |
| GSMUA_Achr1P21620_001 | Banana | nucleus | 33.01 | 24.2 |
| GSMUA_Achr1P12270_001 | Banana | nucleus | 33.98 | 23.89 |
| GSMUA_Achr3P06620_001 | Banana | nucleus | 31.55 | 23.72 |
| GSMUA_Achr4P00550_001 | Banana | nucleus | 32.04 | 23.57 |
| GSMUA_Achr10P... | Banana | nucleus | 28.16 | 23.48 |
| GSMUA_Achr2P07420_001 | Banana | nucleus | 33.01 | 23.29 |
| GSMUA_Achr1P16280_001 | Banana | nucleus | 24.76 | 23.18 |
| GSMUA_Achr6P10660_001 | Banana | nucleus | 31.07 | 22.61 |
| GSMUA_Achr10P... | Banana | nucleus | 35.92 | 21.39 |
| GSMUA_Achr2P14750_001 | Banana | extracellular, nucleus | 29.61 | 21.33 |
| GSMUA_Achr9P14960_001 | Banana | nucleus | 28.64 | 21.0 |
| GSMUA_Achr1P18670_001 | Banana | nucleus | 25.24 | 17.93 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | EnsemblPlantsGene:GSMUA_Achr5G05300_001 | EnsemblPlants:GSMUA_Achr5P05300_001 | EnsemblPlants:GSMUA_Achr5T05300_001 | InterPro:HTH_motif | InterPro:Homeobox-like_sf |
| InterPro:Homeobox_CS | InterPro:Homeobox_dom | InterPro:IPR001356 | InterPro:Leu_zip_homeo | UniProt:M0SVV9 | PFAM:PF00046 |
| PFAM:PF02183 | PRINTS:PR00031 | ScanProsite:PS00027 | PFscan:PS50071 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF136 |
| SMART:SM00389 | SUPFAM:SSF46689 | UniParc:UPI0002958018 | SEG:seg | : | : |
Description
Homeobox-leucine zipper protein HAT5 [Source:GMGC_GENE;Acc:GSMUA_Achr5G05300_001]
Coordinates
chr5:-:3922887..3925223
Molecular Weight (calculated)
23590.0 Da
IEP (calculated)
7.273
GRAVY (calculated)
-0.650
Length
206 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSGRLIFHS SLSHGHHGQQ MILLGGGGPV FGGGFLPVSA VEGASKRRPF FTSPDELLEE EYYYYDEQLP EKKRRLTPEQ VHLLERSFEA ENKLEPERKG
101: ELARKLGMQP RQVAVWFQNR RARWKNKQLE HDFDRLKSSY NTLLADHDSL LRENDRLRSQ AYTLSLSPLD SKITPPSSSI VFDEMVGVGA IGEWPPSCCY
201: VRLHYG
101: ELARKLGMQP RQVAVWFQNR RARWKNKQLE HDFDRLKSSY NTLLADHDSL LRENDRLRSQ AYTLSLSPLD SKITPPSSSI VFDEMVGVGA IGEWPPSCCY
201: VRLHYG
001: MESNSFFFDP SASHGNSMFF LGNLNPVVQG GGARSMMNME ETSKRRPFFS SPEDLYDDDF YDDQLPEKKR RLTTEQVHLL EKSFETENKL EPERKTQLAK
101: KLGLQPRQVA VWFQNRRARW KTKQLERDYD LLKSTYDQLL SNYDSIVMDN DKLRSEVTSL TEKLQGKQET ANEPPGQVPE PNQLDPVYIN AAAIKTEDRL
201: SSGSVGSAVL DDDAPQLLDS CDSYFPSIVP IQDNSNASDH DNDRSCFADV FVPTTSPSHD HHGESLAFWG WP
101: KLGLQPRQVA VWFQNRRARW KTKQLERDYD LLKSTYDQLL SNYDSIVMDN DKLRSEVTSL TEKLQGKQET ANEPPGQVPE PNQLDPVYIN AAAIKTEDRL
201: SSGSVGSAVL DDDAPQLLDS CDSYFPSIVP IQDNSNASDH DNDRSCFADV FVPTTSPSHD HHGESLAFWG WP
Arabidopsis Description
HAT5HD-ZIP-1 [Source:UniProtKB/TrEMBL;Acc:A0A178VBZ2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.