Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr1P16280_001 | Banana | nucleus | 50.0 | 65.91 |
| EER99231 | Sorghum | nucleus | 40.69 | 48.56 |
| Zm00001d021268_P001 | Maize | nucleus | 38.28 | 46.44 |
| HORVU5Hr1G081090.1 | Barley | nucleus | 40.0 | 46.4 |
| Os09t0528200-01 | Rice | nucleus | 39.66 | 46.18 |
| TraesCS5D01G323100.2 | Wheat | nucleus | 39.66 | 46.18 |
| TraesCS5A01G316800.1 | Wheat | nucleus | 39.31 | 45.78 |
| TraesCS5B01G317400.1 | Wheat | nucleus | 39.31 | 45.78 |
| Zm00001d006195_P001 | Maize | nucleus | 36.9 | 43.85 |
| Solyc03g082550.2.1 | Tomato | nucleus | 27.93 | 38.76 |
| Solyc08g083130.2.1 | Tomato | extracellular, nucleus | 25.86 | 38.27 |
| CDX76591 | Canola | nucleus | 30.0 | 37.99 |
| Solyc01g096320.2.1 | Tomato | nucleus | 31.03 | 37.66 |
| CDY71532 | Canola | nucleus | 29.31 | 37.28 |
| CDX89136 | Canola | nucleus | 29.31 | 37.12 |
| VIT_02s0025g02590.t01 | Wine grape | nucleus | 24.48 | 36.98 |
| Bra014417.1-P | Field mustard | nucleus | 28.97 | 36.84 |
| Bra007637.1-P | Field mustard | nucleus | 28.97 | 36.52 |
| CDY57869 | Canola | nucleus | 28.97 | 36.52 |
| PGSC0003DMT400047622 | Potato | nucleus | 26.9 | 36.45 |
| Bra004516.1-P | Field mustard | nucleus | 31.72 | 36.22 |
| CDX80037 | Canola | nucleus | 31.72 | 36.22 |
| AT3G61890.1 | Thale cress | nucleus | 29.31 | 36.17 |
| Solyc06g053220.2.1 | Tomato | nucleus | 27.93 | 36.0 |
| KRH47840 | Soybean | nucleus | 29.31 | 35.71 |
| PGSC0003DMT400000694 | Potato | nucleus | 31.03 | 35.71 |
| PGSC0003DMT400013968 | Potato | nucleus | 27.59 | 35.56 |
| CDY41547 | Canola | nucleus | 31.03 | 35.43 |
| Bra039265.1-P | Field mustard | nucleus | 27.93 | 35.37 |
| KRH06407 | Soybean | nucleus | 29.66 | 35.1 |
| CDY27308 | Canola | nucleus | 27.59 | 34.93 |
| KRH64347 | Soybean | nucleus | 29.31 | 34.69 |
| VIT_16s0098g01170.t01 | Wine grape | nucleus | 26.9 | 34.67 |
| VIT_15s0048g02870.t01 | Wine grape | nucleus | 28.97 | 34.57 |
| KRH53589 | Soybean | nucleus | 29.31 | 33.86 |
| AT2G46680.1 | Thale cress | nucleus | 30.0 | 33.72 |
| TraesCS6A01G240400.1 | Wheat | nucleus | 24.83 | 32.58 |
| TraesCS2D01G387300.1 | Wheat | nucleus | 26.9 | 32.1 |
| TraesCS6D01G222600.1 | Wheat | nucleus | 24.48 | 31.56 |
| TraesCS6B01G284300.1 | Wheat | nucleus | 24.48 | 31.42 |
| TraesCS2B01G407600.1 | Wheat | nucleus | 27.59 | 30.77 |
| TraesCS2A01G389400.1 | Wheat | nucleus | 27.93 | 30.57 |
| HORVU2Hr1G092710.2 | Barley | nucleus | 27.59 | 30.08 |
| Zm00001d002799_P001 | Maize | nucleus | 26.9 | 29.89 |
| Zm00001d017422_P001 | Maize | nucleus | 23.79 | 29.36 |
| Os04t0541700-02 | Rice | nucleus | 27.93 | 29.35 |
| EES05814 | Sorghum | nucleus | 25.17 | 29.2 |
| GSMUA_Achr10P... | Banana | nucleus | 18.97 | 28.95 |
| EES11198 | Sorghum | nucleus | 26.9 | 28.89 |
| Zm00001d025964_P001 | Maize | nucleus | 26.21 | 28.36 |
| Os02t0649300-01 | Rice | nucleus | 25.17 | 27.97 |
| GSMUA_Achr6P10310_001 | Banana | nucleus | 18.97 | 26.57 |
| GSMUA_Achr7P12740_001 | Banana | nucleus | 20.69 | 26.32 |
| GSMUA_Achr5P05300_001 | Banana | nucleus | 17.93 | 25.24 |
| HORVU6Hr1G061390.1 | Barley | nucleus | 27.59 | 25.16 |
| GSMUA_Achr10P... | Banana | nucleus | 22.07 | 24.33 |
| GSMUA_Achr3P06620_001 | Banana | nucleus | 22.41 | 23.72 |
| GSMUA_Achr10P... | Banana | nucleus | 20.0 | 23.48 |
| GSMUA_Achr6P36450_001 | Banana | nucleus | 18.62 | 23.28 |
| GSMUA_Achr7P11760_001 | Banana | nucleus | 20.0 | 23.02 |
| GSMUA_Achr9P14570_001 | Banana | nucleus | 20.34 | 22.43 |
| GSMUA_Achr9P14960_001 | Banana | nucleus | 21.38 | 22.06 |
| GSMUA_Achr2P14750_001 | Banana | extracellular, nucleus | 21.38 | 21.68 |
| GSMUA_Achr7P20950_001 | Banana | nucleus | 17.59 | 21.61 |
| GSMUA_Achr9P18360_001 | Banana | nucleus | 21.03 | 21.55 |
| GSMUA_Achr3P06190_001 | Banana | nucleus | 21.03 | 21.55 |
| GSMUA_Achr8P25940_001 | Banana | nucleus | 21.03 | 21.25 |
| GSMUA_Achr2P07420_001 | Banana | nucleus | 20.0 | 19.86 |
| GSMUA_Achr7P09730_001 | Banana | nucleus | 20.34 | 19.67 |
| GSMUA_Achr4P00550_001 | Banana | nucleus | 18.97 | 19.64 |
| GSMUA_Achr1P21620_001 | Banana | nucleus | 18.97 | 19.57 |
| GSMUA_Achr1P12270_001 | Banana | nucleus | 19.66 | 19.45 |
| GSMUA_Achr7P11600_001 | Banana | nucleus | 17.93 | 18.84 |
| GSMUA_Achr3P21430_001 | Banana | nucleus | 17.24 | 18.8 |
| GSMUA_Achr10P... | Banana | nucleus | 18.28 | 18.53 |
| GSMUA_Achr6P10660_001 | Banana | nucleus | 17.93 | 18.37 |
| GSMUA_Achr10P... | Banana | nucleus | 20.69 | 17.34 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | EnsemblPlantsGene:GSMUA_Achr1G18670_001 | EnsemblPlants:GSMUA_Achr1P18670_001 | EnsemblPlants:GSMUA_Achr1T18670_001 | InterPro:HTH_motif | InterPro:Homeobox-like_sf |
| InterPro:Homeobox_CS | InterPro:Homeobox_dom | InterPro:IPR001356 | InterPro:Leu_zip_homeo | UniProt:M0S125 | PFAM:PF00046 |
| PFAM:PF02183 | PRINTS:PR00031 | ScanProsite:PS00027 | PFscan:PS50071 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF346 |
| SMART:SM00389 | SUPFAM:SSF46689 | UniParc:UPI0002953259 | SEG:seg | : | : |
Description
Putative Homeobox-leucine zipper protein HOX6 [Source:GMGC_GENE;Acc:GSMUA_Achr1G18670_001]
Coordinates
chr1:+:13959378..13967005
Molecular Weight (calculated)
33820.0 Da
IEP (calculated)
4.544
GRAVY (calculated)
-0.984
Length
290 amino acids
Sequence
(BLAST)
(BLAST)
001: MNLETRVWER NSSSPSFLQE HLSAADIEQH IHPPTSSPCC CCWWWWWLTE GSACEMMESE EEQSAAEEGD CCSWMNPTAE SSKGKGDRRR TRRRFSEEQI
101: KSMESMFETQ TKLEPRQKLQ LARELGLQPR QVAIWFQNKR ARWKSKQLER EYRGLKADYD ALLSSFDSLK KEKQLLLQQL QDLAELIDKA EERSNRDDEG
201: SNDRDSEIKK DQSSRLSLKE EADLEFAVCA AEEDKKPRYF SEDELNLCAG QPAISSLTSS AEQQFCLTTS WPSDQSCNNS QWWEFWPLSE
101: KSMESMFETQ TKLEPRQKLQ LARELGLQPR QVAIWFQNKR ARWKSKQLER EYRGLKADYD ALLSSFDSLK KEKQLLLQQL QDLAELIDKA EERSNRDDEG
201: SNDRDSEIKK DQSSRLSLKE EADLEFAVCA AEEDKKPRYF SEDELNLCAG QPAISSLTSS AEQQFCLTTS WPSDQSCNNS QWWEFWPLSE
001: MTEGGEYSPA MMSAEPFLTM KKMKKSNHNK NNQRRFSDEQ IKSLEMMFES ETRLEPRKKV QLARELGLQP RQVAIWFQNK RARWKSKQLE TEYNILRQNY
101: DNLASQFESL KKEKQALVSE LQRLKEATQK KTQEEERQCS GDQAVVALSS THHESENEEN RRRKPEEVRP EMEMKDDKGH HGVMCDHHDY EDDDNGYSNN
201: IKREYFGGFE EEPDHLMNIV EPADSCLTSS DDWRGFKSDT TTLLDQSSNN YPWRDFWS
101: DNLASQFESL KKEKQALVSE LQRLKEATQK KTQEEERQCS GDQAVVALSS THHESENEEN RRRKPEEVRP EMEMKDDKGH HGVMCDHHDY EDDDNGYSNN
201: IKREYFGGFE EEPDHLMNIV EPADSCLTSS DDWRGFKSDT TTLLDQSSNN YPWRDFWS
Arabidopsis Description
ATHB-7Homeobox-leucine zipper protein ATHB-7 [Source:UniProtKB/Swiss-Prot;Acc:P46897]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.