Subcellular Localization
min:
: max
Winner_takes_all: extracellular, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
extracellular:
29876421
|
msms PMID:
29876421
doi
Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_02s0025g02590.t01 | Wine grape | nucleus | 36.73 | 37.5 |
| Solyc01g096320.2.1 | Tomato | nucleus | 42.86 | 35.15 |
| Solyc03g082550.2.1 | Tomato | nucleus | 35.71 | 33.49 |
| GSMUA_Achr1P16280_001 | Banana | nucleus | 35.2 | 31.36 |
| Solyc06g053220.2.1 | Tomato | nucleus | 35.2 | 30.67 |
| EER99231 | Sorghum | nucleus | 37.76 | 30.45 |
| TraesCS6A01G240400.1 | Wheat | nucleus | 33.67 | 29.86 |
| Zm00001d021268_P001 | Maize | nucleus | 36.22 | 29.71 |
| TraesCS6D01G222600.1 | Wheat | nucleus | 33.16 | 28.89 |
| Zm00001d006195_P001 | Maize | nucleus | 35.71 | 28.69 |
| TraesCS5D01G323100.2 | Wheat | nucleus | 36.22 | 28.51 |
| Os09t0528200-01 | Rice | nucleus | 36.22 | 28.51 |
| TraesCS5A01G316800.1 | Wheat | nucleus | 36.22 | 28.51 |
| TraesCS5B01G317400.1 | Wheat | nucleus | 35.71 | 28.11 |
| HORVU5Hr1G081090.1 | Barley | nucleus | 35.71 | 28.0 |
| TraesCS6B01G284300.1 | Wheat | nucleus | 32.14 | 27.88 |
| TraesCS2D01G387300.1 | Wheat | nucleus | 32.65 | 26.34 |
| GSMUA_Achr1P18670_001 | Banana | nucleus | 38.27 | 25.86 |
| TraesCS2B01G407600.1 | Wheat | nucleus | 33.16 | 25.0 |
| HORVU2Hr1G092710.2 | Barley | nucleus | 33.67 | 24.81 |
| Solyc02g077590.1.1 | Tomato | nucleus | 22.45 | 24.58 |
| TraesCS2A01G389400.1 | Wheat | nucleus | 33.16 | 24.53 |
| Os02t0649300-01 | Rice | nucleus | 32.65 | 24.52 |
| EES11198 | Sorghum | nucleus | 33.67 | 24.44 |
| Os04t0541700-02 | Rice | nucleus | 34.18 | 24.28 |
| Zm00001d017422_P001 | Maize | nucleus | 29.08 | 24.26 |
| Zm00001d002799_P001 | Maize | nucleus | 32.14 | 24.14 |
| Zm00001d025964_P001 | Maize | nucleus | 32.14 | 23.51 |
| Solyc07g062790.1.1 | Tomato | nucleus | 20.41 | 22.99 |
| Solyc02g086930.2.1 | Tomato | nucleus | 33.16 | 22.81 |
| EES05814 | Sorghum | nucleus | 29.08 | 22.8 |
| Solyc01g010600.2.1 | Tomato | nucleus | 28.06 | 22.63 |
| Solyc04g005800.2.1 | Tomato | nucleus | 34.18 | 22.56 |
| Solyc05g006980.2.1 | Tomato | nucleus | 32.65 | 22.22 |
| Solyc02g067410.1.1 | Tomato | nucleus | 29.59 | 22.05 |
| Solyc05g051460.2.1 | Tomato | nucleus | 35.2 | 22.04 |
| Solyc09g008810.2.1 | Tomato | nucleus | 26.53 | 21.58 |
| Solyc11g010270.1.1 | Tomato | nucleus | 38.27 | 21.43 |
| Solyc03g113270.2.1 | Tomato | nucleus, plastid | 35.2 | 21.36 |
| Solyc05g007180.2.1 | Tomato | nucleus | 31.63 | 20.33 |
| Solyc02g087840.2.1 | Tomato | nucleus | 30.61 | 19.42 |
| HORVU6Hr1G061390.1 | Barley | nucleus | 31.12 | 19.18 |
| Solyc04g074700.2.1 | Tomato | nucleus | 30.1 | 19.03 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | InterPro:HTH_motif | InterPro:Homeobox-like_sf | InterPro:Homeobox_CS | InterPro:Homeobox_dom | InterPro:IPR001356 |
| UniProt:K4CPV9 | InterPro:Leu_zip_homeo | PFAM:PF00046 | PFAM:PF02183 | PRINTS:PR00031 | ScanProsite:PS00027 |
| PFscan:PS50071 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF122 | SMART:SM00389 | SUPFAM:SSF46689 | EnsemblPlantsGene:Solyc08g083130.2 |
| EnsemblPlants:Solyc08g083130.2.1 | UniParc:UPI000276CAE3 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr8:-:65677229..65678188
Molecular Weight (calculated)
23142.4 Da
IEP (calculated)
5.066
GRAVY (calculated)
-0.930
Length
196 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPTNSDMIW GESIMSSKCN DNMRRRFNDE QIKSLENMFE TESRPELRTK QQLAKRLGLQ PRQVAIWFQN KRARSKSKQL ELEYRMLQIS YDNLGSKYEL
101: LKKEHESLLI QLQRLKKLME KDDNEKDVNK KSETEVKQDD FAPEFGSRGI DYLRAESDIL DMAQIADGLS EIENEFNFES RTFLHDTGCT SPLWEF
101: LKKEHESLLI QLQRLKKLME KDDNEKDVNK KSETEVKQDD FAPEFGSRGI DYLRAESDIL DMAQIADGLS EIENEFNFES RTFLHDTGCT SPLWEF
001: MTEGGEYSPA MMSAEPFLTM KKMKKSNHNK NNQRRFSDEQ IKSLEMMFES ETRLEPRKKV QLARELGLQP RQVAIWFQNK RARWKSKQLE TEYNILRQNY
101: DNLASQFESL KKEKQALVSE LQRLKEATQK KTQEEERQCS GDQAVVALSS THHESENEEN RRRKPEEVRP EMEMKDDKGH HGVMCDHHDY EDDDNGYSNN
201: IKREYFGGFE EEPDHLMNIV EPADSCLTSS DDWRGFKSDT TTLLDQSSNN YPWRDFWS
101: DNLASQFESL KKEKQALVSE LQRLKEATQK KTQEEERQCS GDQAVVALSS THHESENEEN RRRKPEEVRP EMEMKDDKGH HGVMCDHHDY EDDDNGYSNN
201: IKREYFGGFE EEPDHLMNIV EPADSCLTSS DDWRGFKSDT TTLLDQSSNN YPWRDFWS
Arabidopsis Description
ATHB-7Homeobox-leucine zipper protein ATHB-7 [Source:UniProtKB/Swiss-Prot;Acc:P46897]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.