Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400003586 | Potato | nucleus | 73.14 | 94.56 |
| Solyc02g067410.1.1 | Tomato | nucleus | 54.69 | 64.26 |
| KRH40114 | Soybean | nucleus | 44.98 | 51.48 |
| KRH18490 | Soybean | nucleus | 48.22 | 51.2 |
| KRH01157 | Soybean | nucleus | 44.34 | 51.12 |
| KRG93515 | Soybean | nucleus | 48.22 | 51.03 |
| Solyc01g010600.2.1 | Tomato | nucleus | 38.19 | 48.56 |
| Solyc05g007180.2.1 | Tomato | nucleus | 47.25 | 47.87 |
| Bra006285.1-P | Field mustard | nucleus | 42.07 | 45.94 |
| Bra008717.1-P | Field mustard | nucleus | 42.72 | 45.83 |
| CDY69290 | Canola | nucleus | 36.57 | 45.2 |
| Bra023506.1-P | Field mustard | nucleus | 42.07 | 44.98 |
| Bra039135.1-P | Field mustard | nucleus | 38.51 | 43.75 |
| CDY69034 | Canola | nucleus | 37.86 | 43.66 |
| CDX78614 | Canola | nucleus | 42.07 | 43.19 |
| CDX70596 | Canola | nucleus | 42.39 | 43.09 |
| CDX69546 | Canola | nucleus | 43.04 | 43.04 |
| CDX85054 | Canola | nucleus | 42.72 | 43.0 |
| AT3G01220.1 | Thale cress | nucleus | 39.48 | 42.66 |
| AT5G15150.1 | Thale cress | nucleus | 42.72 | 42.04 |
| CDY70306 | Canola | nucleus | 39.48 | 41.78 |
| CDY28696 | Canola | nucleus | 35.28 | 41.29 |
| Solyc08g083130.2.1 | Tomato | extracellular, nucleus | 19.42 | 30.61 |
| Solyc05g006980.2.1 | Tomato | nucleus | 28.48 | 30.56 |
| Solyc02g086930.2.1 | Tomato | nucleus | 26.86 | 29.12 |
| Solyc04g005800.2.1 | Tomato | nucleus | 27.83 | 28.96 |
| Solyc02g077590.1.1 | Tomato | nucleus | 16.18 | 27.93 |
| Solyc07g062790.1.1 | Tomato | nucleus | 15.53 | 27.59 |
| Solyc09g008810.2.1 | Tomato | nucleus | 21.04 | 26.97 |
| Solyc06g053220.2.1 | Tomato | nucleus | 19.42 | 26.67 |
| Solyc03g113270.2.1 | Tomato | nucleus, plastid | 27.51 | 26.32 |
| Solyc01g096320.2.1 | Tomato | nucleus | 20.06 | 25.94 |
| Solyc03g082550.2.1 | Tomato | nucleus | 17.48 | 25.84 |
| Solyc05g051460.2.1 | Tomato | nucleus | 25.24 | 24.92 |
| Solyc11g010270.1.1 | Tomato | nucleus | 26.54 | 23.43 |
| Solyc04g074700.2.1 | Tomato | nucleus | 22.33 | 22.26 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | InterPro:HTH_motif | InterPro:Homeobox-like_sf | InterPro:Homeobox_CS | InterPro:Homeobox_dom | InterPro:IPR001356 |
| UniProt:K4BBU0 | InterPro:Leu_zip_homeo | PFAM:PF00046 | PFAM:PF02183 | PRINTS:PR00031 | ScanProsite:PS00027 |
| PFscan:PS50071 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF176 | SMART:SM00389 | SUPFAM:SSF46689 | EnsemblPlantsGene:Solyc02g087840.2 |
| EnsemblPlants:Solyc02g087840.2.1 | UniParc:UPI00027682E7 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr2:-:50097434..50099068
Molecular Weight (calculated)
35291.2 Da
IEP (calculated)
6.574
GRAVY (calculated)
-0.923
Length
309 amino acids
Sequence
(BLAST)
(BLAST)
001: MISGSRGIMD FLPSTPDISL NFQDNNHHLP STSPKLFPSP SIPHQDHFNH GVPSMLMRRS MSFSGVERCD NHQDLRVDDN ELSDEDGSSQ LLGEKKRRLN
101: MEQVKALERS FEVANKLEPE RKIQLARALG LQPRQIAIWF QNRRARWKTK QLEKDYEMLK RHFDSLKTDN DALKAQNKEL HSELQLLSVK KRESSGGGGI
201: MFNLNKENEG CWSNNGSDDN NNNNSIDVNL GTRTSSGDSP FYSKNVFPPE PGPVPLAQFL QTSSTPPDHL THCHKNIDPT VQNEGFCNMF TPVDDHTNFW
301: PWPEQQHFN
101: MEQVKALERS FEVANKLEPE RKIQLARALG LQPRQIAIWF QNRRARWKTK QLEKDYEMLK RHFDSLKTDN DALKAQNKEL HSELQLLSVK KRESSGGGGI
201: MFNLNKENEG CWSNNGSDDN NNNNSIDVNL GTRTSSGDSP FYSKNVFPPE PGPVPLAQFL QTSSTPPDHL THCHKNIDPT VQNEGFCNMF TPVDDHTNFW
301: PWPEQQHFN
001: MYMYEEERNN INNNQEGLRL EMAFPQHGFM FQQLHEDNAH HLPSPTSLPS CPPHLFYGGG GNYMMNRSMS FTGVSDHHHL TQKSPTTTNN MNDQDQVGEE
101: DNLSDDGSHM MLGEKKKRLN LEQVRALEKS FELGNKLEPE RKMQLAKALG LQPRQIAIWF QNRRARWKTK QLERDYDSLK KQFDVLKSDN DSLLAHNKKL
201: HAELVALKKH DRKESAKIKR EFAEASWSNN GSTENNHNNN SSDANHVSMI KDLFPSSIRS ATATTTSTHI DHQIVQDQDQ GFCNMFNGID ETTSASYWAW
301: PDQQQQHHNH HQFN
101: DNLSDDGSHM MLGEKKKRLN LEQVRALEKS FELGNKLEPE RKMQLAKALG LQPRQIAIWF QNRRARWKTK QLERDYDSLK KQFDVLKSDN DSLLAHNKKL
201: HAELVALKKH DRKESAKIKR EFAEASWSNN GSTENNHNNN SSDANHVSMI KDLFPSSIRS ATATTTSTHI DHQIVQDQDQ GFCNMFNGID ETTSASYWAW
301: PDQQQQHHNH HQFN
Arabidopsis Description
HAT7Homeobox-leucine zipper protein HAT7 [Source:UniProtKB/Swiss-Prot;Acc:Q00466]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.