Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra023506.1-P | Field mustard | nucleus | 86.99 | 87.89 |
| AT5G15150.1 | Thale cress | nucleus | 81.51 | 75.8 |
| CDX85054 | Canola | nucleus | 79.11 | 75.24 |
| CDX69546 | Canola | nucleus | 78.77 | 74.43 |
| CDX78614 | Canola | nucleus | 76.37 | 74.09 |
| CDX70596 | Canola | nucleus | 76.37 | 73.36 |
| CDY69290 | Canola | nucleus | 58.22 | 68.0 |
| CDY69034 | Canola | nucleus | 59.25 | 64.55 |
| CDY28696 | Canola | nucleus | 52.05 | 57.58 |
| KRG93515 | Soybean | nucleus | 48.29 | 48.29 |
| KRH40114 | Soybean | nucleus | 44.18 | 47.78 |
| KRH18490 | Soybean | nucleus | 47.6 | 47.77 |
| PGSC0003DMT400003586 | Potato | nucleus | 39.04 | 47.7 |
| PGSC0003DMT400017751 | Potato | nucleus | 35.96 | 46.67 |
| KRH01157 | Soybean | nucleus | 42.81 | 46.64 |
| Solyc02g067410.1.1 | Tomato | nucleus | 38.7 | 42.97 |
| CDY52767 | Canola | nucleus | 35.96 | 41.34 |
| CDY46427 | Canola | nucleus | 35.96 | 41.34 |
| CDX67451 | Canola | nucleus | 25.0 | 41.01 |
| CDY11680 | Canola | nucleus | 25.0 | 41.01 |
| CDY48942 | Canola | nucleus | 22.6 | 40.74 |
| CDY38759 | Canola | nucleus | 39.04 | 40.14 |
| Solyc02g087840.2.1 | Tomato | nucleus | 41.78 | 39.48 |
| CDY44091 | Canola | nucleus | 35.96 | 39.47 |
| CDY23547 | Canola | nucleus | 37.67 | 39.29 |
| CDY11659 | Canola | nucleus | 38.7 | 39.24 |
| CDY48391 | Canola | nucleus | 33.56 | 38.89 |
| CDY70870 | Canola | nucleus | 38.7 | 37.54 |
| CDX75029 | Canola | nucleus | 20.55 | 32.09 |
| CDY33168 | Canola | nucleus | 20.21 | 31.22 |
| CDX99719 | Canola | nucleus | 20.55 | 30.77 |
| CDY69536 | Canola | nucleus | 16.1 | 30.13 |
| CDY28803 | Canola | nucleus | 16.1 | 30.13 |
| CDY25596 | Canola | nucleus | 26.71 | 29.32 |
| CDY37519 | Canola | nucleus | 26.03 | 29.23 |
| CDY49056 | Canola | nucleus | 25.68 | 28.52 |
| CDY28673 | Canola | nucleus | 26.37 | 28.31 |
| CDY11269 | Canola | nucleus | 20.55 | 27.52 |
| CDX69357 | Canola | nucleus | 27.4 | 27.12 |
| CDX80887 | Canola | nucleus | 20.21 | 27.06 |
| CDY71047 | Canola | nucleus | 21.23 | 26.96 |
| CDY39476 | Canola | nucleus | 26.03 | 26.95 |
| CDX75697 | Canola | nucleus | 27.05 | 26.78 |
| CDX90376 | Canola | nucleus | 26.03 | 26.67 |
| CDX70284 | Canola | nucleus | 20.89 | 26.52 |
| CDY10356 | Canola | nucleus | 20.89 | 26.52 |
| CDY25597 | Canola | nucleus | 27.05 | 26.42 |
| CDX76923 | Canola | nucleus | 27.74 | 26.13 |
| CDX89467 | Canola | nucleus | 26.71 | 26.0 |
| CDX70283 | Canola | nucleus | 19.18 | 25.57 |
| CDY71532 | Canola | nucleus | 19.86 | 25.44 |
| CDY13761 | Canola | nucleus | 27.05 | 25.4 |
| CDY42007 | Canola | nucleus | 18.84 | 25.11 |
| CDY04896 | Canola | nucleus | 19.52 | 25.11 |
| CDY69618 | Canola | nucleus | 25.68 | 24.59 |
| CDY33967 | Canola | nucleus | 26.03 | 24.52 |
| CDY37819 | Canola | nucleus | 26.03 | 24.52 |
| CDX89136 | Canola | nucleus | 19.18 | 24.45 |
| CDY67332 | Canola | nucleus | 25.34 | 24.26 |
| CDY57869 | Canola | nucleus | 18.84 | 23.91 |
| CDX76591 | Canola | nucleus | 18.49 | 23.58 |
| CDY27308 | Canola | nucleus | 18.15 | 23.14 |
| CDX80037 | Canola | nucleus | 19.52 | 22.44 |
| CDY41547 | Canola | nucleus | 19.18 | 22.05 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.1 | GO:A0A078JXX6 | UniProt:A0A078JXX6 | EnsemblPlants:CDY70306 | ProteinID:CDY70306 |
| ProteinID:CDY70306.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSBRNA2T00097934001 | InterPro:HTH_motif | InterPro:Homeobox-like_sf | InterPro:Homeobox_CS | InterPro:Homeobox_dom | InterPro:IPR001356 |
| InterPro:Leu_zip_homeo | PFAM:PF00046 | PFAM:PF02183 | PRINTS:PR00031 | ScanProsite:PS00027 | PFscan:PS50071 |
| PANTHER:PTHR24326 | PANTHER:PTHR24326:SF264 | SMART:SM00389 | SUPFAM:SSF46689 | UniParc:UPI0004EDD647 | SEG:seg |
Description
BnaCnng67720DBnaCnng67720D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JXX6]
Coordinates
chrLK041747:+:1192..2709
Molecular Weight (calculated)
33617.6 Da
IEP (calculated)
8.159
GRAVY (calculated)
-0.865
Length
292 amino acids
Sequence
(BLAST)
(BLAST)
001: MILKVLNPFM NASSLPNSHN YMRLVWISTL MGKFCCLCFG VGGGGDYMMN RSMSFTGVSD HHHLTQKTPT TTNMNDHDQL GEEDNLSDDG SHMMLGEKKK
101: RLNLEQVRAL EKSFELGNKL EPERKMQLAK ALGLQPRQIA IWFQNRRARW KTKQLERDYD SLKKQFDVLK SDNDSLLAHN KKLHAELVAL KKQDRKEPSK
201: IKRELAEASW SNNEDTDNNN NSDINHVNMI KDLFPSSVRS ATTTTTSSHI DHQVVQDQGF RNMFNGIDET TSAGYWAWPD QQQQHQSHHQ FN
101: RLNLEQVRAL EKSFELGNKL EPERKMQLAK ALGLQPRQIA IWFQNRRARW KTKQLERDYD SLKKQFDVLK SDNDSLLAHN KKLHAELVAL KKQDRKEPSK
201: IKRELAEASW SNNEDTDNNN NSDINHVNMI KDLFPSSVRS ATTTTTSSHI DHQVVQDQGF RNMFNGIDET TSAGYWAWPD QQQQHQSHHQ FN
001: MYMYEEERNN INNNQEGLRL EMAFPQHGFM FQQLHEDNAH HLPSPTSLPS CPPHLFYGGG GNYMMNRSMS FTGVSDHHHL TQKSPTTTNN MNDQDQVGEE
101: DNLSDDGSHM MLGEKKKRLN LEQVRALEKS FELGNKLEPE RKMQLAKALG LQPRQIAIWF QNRRARWKTK QLERDYDSLK KQFDVLKSDN DSLLAHNKKL
201: HAELVALKKH DRKESAKIKR EFAEASWSNN GSTENNHNNN SSDANHVSMI KDLFPSSIRS ATATTTSTHI DHQIVQDQDQ GFCNMFNGID ETTSASYWAW
301: PDQQQQHHNH HQFN
101: DNLSDDGSHM MLGEKKKRLN LEQVRALEKS FELGNKLEPE RKMQLAKALG LQPRQIAIWF QNRRARWKTK QLERDYDSLK KQFDVLKSDN DSLLAHNKKL
201: HAELVALKKH DRKESAKIKR EFAEASWSNN GSTENNHNNN SSDANHVSMI KDLFPSSIRS ATATTTSTHI DHQIVQDQDQ GFCNMFNGID ETTSASYWAW
301: PDQQQQHHNH HQFN
Arabidopsis Description
HAT7Homeobox-leucine zipper protein HAT7 [Source:UniProtKB/Swiss-Prot;Acc:Q00466]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.