Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH40114 | Soybean | nucleus | 88.43 | 87.78 |
| KRH18490 | Soybean | nucleus | 72.39 | 66.67 |
| KRG93515 | Soybean | nucleus | 71.27 | 65.41 |
| KRH45876 | Soybean | nucleus | 54.85 | 52.5 |
| KRG99129 | Soybean | nucleus | 54.1 | 51.97 |
| KRH74821 | Soybean | nucleus | 55.97 | 51.55 |
| KRH69308 | Soybean | nucleus | 55.22 | 50.17 |
| Bra023506.1-P | Field mustard | nucleus | 53.36 | 49.48 |
| Bra006285.1-P | Field mustard | nucleus | 51.12 | 48.41 |
| Bra008717.1-P | Field mustard | nucleus | 51.87 | 48.26 |
| PGSC0003DMT400003586 | Potato | nucleus | 42.91 | 48.12 |
| PGSC0003DMT400017751 | Potato | nucleus | 39.55 | 47.11 |
| Bra039135.1-P | Field mustard | nucleus | 47.39 | 46.69 |
| CDY69290 | Canola | nucleus | 42.91 | 46.0 |
| CDY69034 | Canola | nucleus | 45.52 | 45.52 |
| AT3G01220.1 | Thale cress | nucleus | 48.51 | 45.45 |
| CDX85054 | Canola | nucleus | 51.87 | 45.28 |
| CDX78614 | Canola | nucleus | 50.75 | 45.18 |
| CDX69546 | Canola | nucleus | 51.87 | 44.98 |
| AT5G15150.1 | Thale cress | nucleus | 52.61 | 44.9 |
| Solyc02g067410.1.1 | Tomato | nucleus | 43.66 | 44.49 |
| Solyc02g087840.2.1 | Tomato | nucleus | 51.12 | 44.34 |
| CDY28696 | Canola | nucleus | 43.66 | 44.32 |
| KRG99070 | Soybean | nucleus | 28.36 | 44.19 |
| CDX70596 | Canola | nucleus | 49.63 | 43.75 |
| CDY70306 | Canola | nucleus | 46.64 | 42.81 |
| KRG96107 | Soybean | nucleus | 22.76 | 28.5 |
| KRH54501 | Soybean | nucleus, plastid | 33.21 | 27.3 |
| KRG93337 | Soybean | nucleus | 26.87 | 26.97 |
| KRH20316 | Soybean | nucleus | 27.99 | 26.32 |
| KRH67812 | Soybean | nucleus | 22.76 | 26.18 |
| KRH56963 | Soybean | nucleus, plastid | 32.09 | 25.98 |
| KRH31331 | Soybean | nucleus | 30.22 | 25.8 |
| KRH20007 | Soybean | nucleus | 21.27 | 25.79 |
| KRH45836 | Soybean | nucleus | 30.6 | 25.62 |
| KRH55168 | Soybean | nucleus | 19.03 | 25.5 |
| KRH59287 | Soybean | nucleus | 29.1 | 25.41 |
| KRH32628 | Soybean | nucleus | 21.27 | 25.33 |
| KRG99178 | Soybean | nucleus | 30.6 | 25.31 |
| KRH03417 | Soybean | nucleus, plastid | 30.97 | 25.23 |
| KRG97544 | Soybean | nucleus | 30.22 | 25.16 |
| KRH43132 | Soybean | nucleus | 28.73 | 24.68 |
| KRH69374 | Soybean | nucleus | 31.72 | 24.64 |
| KRH64347 | Soybean | nucleus | 22.39 | 24.49 |
| KRH74760 | Soybean | nucleus | 31.34 | 24.35 |
| KRH47840 | Soybean | nucleus | 21.27 | 23.95 |
| KRH53589 | Soybean | nucleus | 22.01 | 23.51 |
| KRH26193 | Soybean | nucleus | 16.79 | 23.32 |
| KRH63409 | Soybean | nucleus, plastid | 22.76 | 22.93 |
| KRH06407 | Soybean | nucleus | 20.9 | 22.86 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:100783460 | MapMan:15.5.3.1 | EMBL:ACUP02011502 | ncoils:Coil | EnsemblPlantsGene:GLYMA_18G258400 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:HTH_motif | InterPro:Homeobox-like_sf |
| InterPro:Homeobox_CS | InterPro:Homeobox_dom | UniProt:I1N4C2 | InterPro:IPR001356 | EnsemblPlants:KRH01157 | ProteinID:KRH01157 |
| ProteinID:KRH01157.1 | InterPro:Leu_zip_homeo | PFAM:PF00046 | PFAM:PF02183 | PRINTS:PR00031 | ScanProsite:PS00027 |
| PFscan:PS50071 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF264 | SMART:SM00389 | SUPFAM:SSF46689 | UniParc:UPI000233F0F0 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr18:-:54378549..54381370
Molecular Weight (calculated)
30543.0 Da
IEP (calculated)
7.649
GRAVY (calculated)
-0.848
Length
268 amino acids
Sequence
(BLAST)
(BLAST)
001: MAFLPSHGFT FNTTHEEDHC HFPPTSLDPF PSLPPQHFQG GAPFMLKRSM SLSGIENKCN EVHGDDELSD DGVFQSGEKK KRLNLEQVKA LEKSFDQGNK
101: LEPERKVQLA KALGLQPRQV AIWFQNRRAR WKTKQLEKEY EVLKKQFEAV KADNDVLKVR NQKLQAELQA VKSRDCCEAG IISLKKETEG SWSNGNDNNS
201: DLNLDPSRAL GLNSPISSHN IKNLLPNSLK PNSITQLLQD DGLCNMFHNI DAPQNFWPRP DQHHQRFH
101: LEPERKVQLA KALGLQPRQV AIWFQNRRAR WKTKQLEKEY EVLKKQFEAV KADNDVLKVR NQKLQAELQA VKSRDCCEAG IISLKKETEG SWSNGNDNNS
201: DLNLDPSRAL GLNSPISSHN IKNLLPNSLK PNSITQLLQD DGLCNMFHNI DAPQNFWPRP DQHHQRFH
001: MYVFDPTTEA GLRLEMAFPQ HGFMFQQLHE DNSQDQLPSC PPHLFNGGGN YMMNRSMSLM NVQEDHNQTL DEENLSDDGA HTMLGEKKKR LQLEQVKALE
101: KSFELGNKLE PERKIQLAKA LGMQPRQIAI WFQNRRARWK TRQLERDYDS LKKQFESLKS DNASLLAYNK KLLAEVMALK NKECNEGNIV KREAEASWSN
201: NGSTENSSDI NLEMPRETIT THVNTIKDLF PSSIRSSAHD DDHHQNHEIV QEESLCNMFN GIDETTPAGY WAWSDPNHNH HHHQFN
101: KSFELGNKLE PERKIQLAKA LGMQPRQIAI WFQNRRARWK TRQLERDYDS LKKQFESLKS DNASLLAYNK KLLAEVMALK NKECNEGNIV KREAEASWSN
201: NGSTENSSDI NLEMPRETIT THVNTIKDLF PSSIRSSAHD DDHHQNHEIV QEESLCNMFN GIDETTPAGY WAWSDPNHNH HHHQFN
Arabidopsis Description
ATHB-20Homeobox-leucine zipper protein ATHB-20 [Source:UniProtKB/Swiss-Prot;Acc:Q8LAT0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.