Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH55168 | Soybean | nucleus | 88.08 | 85.0 |
| VIT_19s0014g02110.t01 | Wine grape | nucleus | 39.9 | 47.83 |
| AT5G53980.1 | Thale cress | nucleus | 35.75 | 44.23 |
| CDY28803 | Canola | nucleus | 35.23 | 43.59 |
| Bra022687.1-P | Field mustard | nucleus | 34.2 | 42.31 |
| CDY69536 | Canola | nucleus | 33.68 | 41.67 |
| PGSC0003DMT400032390 | Potato | nucleus | 34.2 | 37.29 |
| Solyc07g062790.1.1 | Tomato | nucleus | 32.64 | 36.21 |
| PGSC0003DMT400054818 | Potato | nucleus | 38.86 | 35.38 |
| KRH47840 | Soybean | nucleus | 25.91 | 21.01 |
| KRG93337 | Soybean | nucleus | 27.98 | 20.22 |
| KRG96107 | Soybean | nucleus | 22.28 | 20.09 |
| KRH06407 | Soybean | nucleus | 25.39 | 20.0 |
| KRH67812 | Soybean | nucleus | 23.83 | 19.74 |
| KRH20007 | Soybean | nucleus | 22.28 | 19.46 |
| KRH32628 | Soybean | nucleus | 21.76 | 18.67 |
| KRH20316 | Soybean | nucleus | 27.46 | 18.6 |
| KRH59287 | Soybean | nucleus | 29.53 | 18.57 |
| KRH45836 | Soybean | nucleus | 30.57 | 18.44 |
| KRH43132 | Soybean | nucleus | 29.02 | 17.95 |
| KRG99129 | Soybean | nucleus | 25.39 | 17.56 |
| KRH64347 | Soybean | nucleus | 22.28 | 17.55 |
| KRH74821 | Soybean | nucleus | 26.42 | 17.53 |
| KRG97544 | Soybean | nucleus | 29.02 | 17.39 |
| KRH69308 | Soybean | nucleus | 26.42 | 17.29 |
| KRH31331 | Soybean | nucleus | 27.98 | 17.2 |
| KRH45876 | Soybean | nucleus | 24.87 | 17.14 |
| KRH69374 | Soybean | nucleus | 30.05 | 16.81 |
| KRH01157 | Soybean | nucleus | 23.32 | 16.79 |
| KRH53589 | Soybean | nucleus | 21.76 | 16.73 |
| KRG99178 | Soybean | nucleus | 27.98 | 16.67 |
| KRH40114 | Soybean | nucleus | 23.32 | 16.67 |
| KRH54501 | Soybean | nucleus, plastid | 27.98 | 16.56 |
| KRH74760 | Soybean | nucleus | 29.53 | 16.52 |
| KRH18490 | Soybean | nucleus | 24.35 | 16.15 |
| KRG93515 | Soybean | nucleus | 24.35 | 16.1 |
| KRH03417 | Soybean | nucleus, plastid | 26.94 | 15.81 |
| KRH56963 | Soybean | nucleus, plastid | 26.42 | 15.41 |
| KRG99070 | Soybean | nucleus | 12.95 | 14.53 |
| KRH63409 | Soybean | nucleus, plastid | 17.1 | 12.41 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.1 | UniProt:A0A0R0H5N3 | EMBL:ACUP02007593 | ncoils:Coil | EnsemblPlantsGene:GLYMA_12G1584002 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:Homeobox-like_sf | InterPro:Homeobox_CS | InterPro:Homeobox_dom |
| InterPro:IPR001356 | EnsemblPlants:KRH26193 | ProteinID:KRH26193 | ProteinID:KRH26193.1 | PFAM:PF00046 | ScanProsite:PS00027 |
| PFscan:PS50071 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF257 | SMART:SM00389 | SUPFAM:SSF46689 | UniParc:UPI0006ED7B43 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr12:-:26696273..26696854
Molecular Weight (calculated)
22048.7 Da
IEP (calculated)
7.006
GRAVY (calculated)
-0.948
Length
193 amino acids
Sequence
(BLAST)
(BLAST)
001: TQPQDHAHHQ RAKHNNNNNK RLTEDQVAIL EKCFASNMKL EPEQKFHLAN QLGVPPRQVA IWYQNKRARW KTQSLEVDHG VLQARLENVV AEKKQLEKDV
101: ERLKAELKKA QEMLLISNNV KSGDHSNNNN NNASCEFSTS FEEGGSSGVV LDDATHHHHH ECWQSGSEVM QVEELFTYFM GANYGSGLHE KRA
101: ERLKAELKKA QEMLLISNNV KSGDHSNNNN NNASCEFSTS FEEGGSSGVV LDDATHHHHH ECWQSGSEVM QVEELFTYFM GANYGSGLHE KRA
001: MENSQSQGKN KKKRLTQDQV RQLEKCFTMN KKLEPDLKLQ LSNQLGLPQR QVAVWFQNKR ARFKTQSLEV QHCTLQSKHE AALSDKAKLE HQVQFLQDEL
101: KRARNQLALF TNQDSPVDNS NLGSCDEDHD DQVVVFDELY ACFVSNGHGS SSTSWV
101: KRARNQLALF TNQDSPVDNS NLGSCDEDHD DQVVVFDELY ACFVSNGHGS SSTSWV
Arabidopsis Description
ATHB-52Homeobox-leucine zipper protein ATHB-52 [Source:UniProtKB/Swiss-Prot;Acc:Q9FN29]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.