Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX80037 | Canola | nucleus | 97.24 | 97.24 |
| AT2G46680.1 | Thale cress | nucleus | 83.07 | 81.78 |
| CDY27308 | Canola | nucleus | 70.08 | 77.73 |
| CDX89136 | Canola | nucleus | 60.63 | 67.25 |
| CDY57869 | Canola | nucleus | 60.24 | 66.52 |
| CDX76591 | Canola | nucleus | 59.84 | 66.38 |
| CDY71532 | Canola | nucleus | 59.45 | 66.23 |
| KRH06407 | Soybean | nucleus | 50.39 | 52.24 |
| KRH47840 | Soybean | nucleus | 48.82 | 52.1 |
| VIT_15s0048g02870.t01 | Wine grape | nucleus | 49.61 | 51.85 |
| PGSC0003DMT400000694 | Potato | nucleus | 48.43 | 48.81 |
| Solyc01g096320.2.1 | Tomato | nucleus | 45.67 | 48.54 |
| GSMUA_Achr1P16280_001 | Banana | nucleus | 32.28 | 37.27 |
| EER99231 | Sorghum | nucleus | 35.43 | 37.04 |
| TraesCS5B01G317400.1 | Wheat | nucleus | 35.04 | 35.74 |
| Os09t0528200-01 | Rice | nucleus | 35.04 | 35.74 |
| HORVU5Hr1G081090.1 | Barley | nucleus | 35.04 | 35.6 |
| Zm00001d021268_P001 | Maize | nucleus | 33.46 | 35.56 |
| TraesCS5D01G323100.2 | Wheat | nucleus | 34.65 | 35.34 |
| TraesCS5A01G316800.1 | Wheat | nucleus | 34.25 | 34.94 |
| Zm00001d006195_P001 | Maize | nucleus | 32.28 | 33.61 |
| TraesCS2D01G387300.1 | Wheat | nucleus | 31.89 | 33.33 |
| TraesCS6A01G240400.1 | Wheat | nucleus | 27.95 | 32.13 |
| TraesCS6D01G222600.1 | Wheat | nucleus | 27.95 | 31.56 |
| TraesCS2B01G407600.1 | Wheat | nucleus | 32.28 | 31.54 |
| Zm00001d017422_P001 | Maize | nucleus | 29.13 | 31.49 |
| CDY11680 | Canola | nucleus | 22.05 | 31.46 |
| CDX67451 | Canola | nucleus | 22.05 | 31.46 |
| GSMUA_Achr1P18670_001 | Banana | nucleus | 35.43 | 31.03 |
| EES05814 | Sorghum | nucleus | 30.32 | 30.8 |
| Os04t0541700-02 | Rice | nucleus | 33.07 | 30.43 |
| CDY48942 | Canola | nucleus | 19.29 | 30.25 |
| TraesCS6B01G284300.1 | Wheat | nucleus | 26.77 | 30.09 |
| HORVU2Hr1G092710.2 | Barley | nucleus | 31.5 | 30.08 |
| TraesCS2A01G389400.1 | Wheat | nucleus | 31.1 | 29.81 |
| Zm00001d002799_P001 | Maize | nucleus | 30.32 | 29.5 |
| Zm00001d025964_P001 | Maize | nucleus | 31.1 | 29.48 |
| EES11198 | Sorghum | nucleus | 30.32 | 28.52 |
| CDX99719 | Canola | nucleus | 21.65 | 28.21 |
| Os02t0649300-01 | Rice | nucleus | 28.35 | 27.59 |
| CDX75029 | Canola | nucleus | 19.68 | 26.74 |
| CDY33168 | Canola | nucleus | 19.68 | 26.45 |
| CDY37519 | Canola | nucleus | 25.98 | 25.38 |
| CDY28803 | Canola | nucleus | 15.35 | 25.0 |
| CDY69536 | Canola | nucleus | 15.35 | 25.0 |
| CDY49056 | Canola | nucleus | 25.59 | 24.71 |
| CDY25596 | Canola | nucleus | 25.59 | 24.44 |
| CDX80887 | Canola | nucleus | 20.87 | 24.31 |
| CDX70284 | Canola | nucleus | 21.65 | 23.91 |
| CDY10356 | Canola | nucleus | 21.65 | 23.91 |
| CDY11269 | Canola | nucleus | 20.47 | 23.85 |
| CDY28673 | Canola | nucleus | 25.2 | 23.53 |
| CDY71047 | Canola | nucleus | 21.26 | 23.48 |
| CDY04896 | Canola | nucleus | 20.87 | 23.35 |
| CDX89467 | Canola | nucleus | 27.17 | 23.0 |
| CDY13761 | Canola | nucleus | 27.95 | 22.83 |
| CDY25597 | Canola | nucleus | 26.77 | 22.74 |
| CDX76923 | Canola | nucleus | 27.17 | 22.26 |
| CDX70283 | Canola | nucleus | 18.9 | 21.92 |
| CDX69357 | Canola | nucleus | 25.2 | 21.69 |
| CDY69618 | Canola | nucleus | 25.98 | 21.64 |
| CDY38759 | Canola | nucleus | 24.02 | 21.48 |
| CDY42007 | Canola | nucleus | 18.5 | 21.46 |
| HORVU6Hr1G061390.1 | Barley | nucleus | 26.77 | 21.38 |
| CDX75697 | Canola | nucleus | 24.8 | 21.36 |
| CDY69290 | Canola | nucleus | 20.87 | 21.2 |
| CDY11659 | Canola | nucleus | 24.02 | 21.18 |
| CDY48391 | Canola | nucleus | 20.87 | 21.03 |
| CDY67332 | Canola | nucleus | 25.2 | 20.98 |
| CDY37819 | Canola | nucleus | 25.59 | 20.97 |
| CDY33967 | Canola | nucleus | 25.2 | 20.65 |
| CDY44091 | Canola | nucleus | 21.26 | 20.3 |
| CDY39476 | Canola | nucleus | 22.44 | 20.21 |
| CDX90376 | Canola | nucleus | 22.44 | 20.0 |
| CDY23547 | Canola | nucleus | 22.05 | 20.0 |
| CDY69034 | Canola | nucleus | 20.87 | 19.78 |
| CDY52767 | Canola | nucleus | 19.29 | 19.29 |
| CDY46427 | Canola | nucleus | 19.29 | 19.29 |
| CDX78614 | Canola | nucleus | 22.83 | 19.27 |
| CDX85054 | Canola | nucleus | 23.23 | 19.22 |
| CDY70306 | Canola | nucleus | 22.05 | 19.18 |
| CDX69546 | Canola | nucleus | 23.23 | 19.09 |
| CDX70596 | Canola | nucleus | 22.83 | 19.08 |
| CDY70870 | Canola | nucleus | 22.05 | 18.6 |
| CDY28696 | Canola | nucleus | 18.9 | 18.18 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.1 | GO:A0A078HUR3 | UniProt:A0A078HUR3 | EnsemblPlants:CDY41547 | ProteinID:CDY41547 |
| ProteinID:CDY41547.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSBRNA2T00073178001 | InterPro:HTH_motif | InterPro:Homeobox-like_sf | InterPro:Homeobox_CS | InterPro:Homeobox_dom | InterPro:IPR001356 |
| InterPro:Leu_zip_homeo | PFAM:PF00046 | PFAM:PF02183 | PRINTS:PR00031 | ScanProsite:PS00027 | PFscan:PS50071 |
| PANTHER:PTHR24326 | PANTHER:PTHR24326:SF122 | SMART:SM00389 | SUPFAM:SSF46689 | UniParc:UPI0004EDEDB2 | SEG:seg |
Description
BnaC04g00750DBnaC04g00750D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HUR3]
Coordinates
chrLK032500:-:80646..81890
Molecular Weight (calculated)
29663.1 Da
IEP (calculated)
4.552
GRAVY (calculated)
-1.074
Length
254 amino acids
Sequence
(BLAST)
(BLAST)
001: MTEGGEYYLA RMSVDPFMAM KKSNHNKNNQ RRFSDEQIKS LEMMFESETK LEPRKKVQLA RELGLQPRQV AIWFQNKRAR WKSKQLETEF NILRQNYNDL
101: ASQFESLKKE KQALVSELHR LNEEVQKTHE EERLCCGDQA AVVALSSTDH ESENEENTRR EQEEEVRPEM EVCEKGDDGV LCGHHNDDYD DGGYNNNIKR
201: EYFGGFEEEA DHLMNIVEPA DSCLTSSDDW GGFKSNANLL DQSSSNCPWW DFWS
101: ASQFESLKKE KQALVSELHR LNEEVQKTHE EERLCCGDQA AVVALSSTDH ESENEENTRR EQEEEVRPEM EVCEKGDDGV LCGHHNDDYD DGGYNNNIKR
201: EYFGGFEEEA DHLMNIVEPA DSCLTSSDDW GGFKSNANLL DQSSSNCPWW DFWS
001: MTEGGEYSPA MMSAEPFLTM KKMKKSNHNK NNQRRFSDEQ IKSLEMMFES ETRLEPRKKV QLARELGLQP RQVAIWFQNK RARWKSKQLE TEYNILRQNY
101: DNLASQFESL KKEKQALVSE LQRLKEATQK KTQEEERQCS GDQAVVALSS THHESENEEN RRRKPEEVRP EMEMKDDKGH HGVMCDHHDY EDDDNGYSNN
201: IKREYFGGFE EEPDHLMNIV EPADSCLTSS DDWRGFKSDT TTLLDQSSNN YPWRDFWS
101: DNLASQFESL KKEKQALVSE LQRLKEATQK KTQEEERQCS GDQAVVALSS THHESENEEN RRRKPEEVRP EMEMKDDKGH HGVMCDHHDY EDDDNGYSNN
201: IKREYFGGFE EEPDHLMNIV EPADSCLTSS DDWRGFKSDT TTLLDQSSNN YPWRDFWS
Arabidopsis Description
ATHB-7Homeobox-leucine zipper protein ATHB-7 [Source:UniProtKB/Swiss-Prot;Acc:P46897]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.