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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • plastid 2
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra007881.1-P Field mustard nucleus 92.69 97.89
CDY44091 Canola nucleus 86.05 97.37
CDY38759 Canola nucleus 86.38 91.55
AT1G69780.1 Thale cress nucleus 88.7 90.82
CDY11659 Canola nucleus 85.05 88.89
CDY23547 Canola nucleus 77.74 83.57
CDY48391 Canola nucleus 67.77 80.95
CDY46427 Canola nucleus 61.79 73.23
CDY52767 Canola nucleus 61.46 72.83
VIT_01s0026g01950.t01 Wine grape nucleus 64.12 67.72
KRG99129 Soybean nucleus 59.47 64.16
KRH45876 Soybean nucleus 59.14 63.57
KRH74821 Soybean nucleus 60.8 62.89
KRH69308 Soybean nucleus 61.13 62.37
Solyc05g007180.2.1 Tomato nucleus 61.13 60.33
PGSC0003DMT400065805 Potato nucleus 61.13 60.13
KRG99070 Soybean nucleus 31.56 55.23
GSMUA_Achr7P11600_001 Banana nucleus 49.17 53.62
GSMUA_Achr7P20950_001 Banana nucleus 41.53 52.97
GSMUA_Achr6P36450_001 Banana nucleus 40.53 52.59
GSMUA_Achr4P00550_001 Banana nucleus 48.84 52.5
GSMUA_Achr10P... Banana nucleus 49.83 52.45
GSMUA_Achr1P21620_001 Banana nucleus 48.84 52.31
VIT_14s0108g00390.t01 Wine grape nucleus 48.84 51.94
GSMUA_Achr2P07420_001 Banana nucleus 49.5 51.03
GSMUA_Achr1P12270_001 Banana nucleus 49.5 50.85
GSMUA_Achr3P21430_001 Banana nucleus 44.52 50.38
GSMUA_Achr6P10660_001 Banana nucleus 46.84 49.82
CDY69290 Canola nucleus 38.54 46.4
Zm00001d027852_P001 Maize nucleus 52.49 45.93
CDY48942 Canola nucleus 24.58 45.68
TraesCS4B01G287600.1 Wheat nucleus 50.17 45.62
CDY69034 Canola nucleus 40.53 45.52
TraesCS4D01G286400.2 Wheat nucleus 50.17 44.54
EER92780 Sorghum nucleus 52.49 44.51
TraesCS4A01G016600.1 Wheat nucleus, plastid 49.5 44.08
Zm00001d048312_P001 Maize nucleus 49.5 43.31
CDX78614 Canola nucleus 41.2 41.2
CDY28696 Canola nucleus 35.55 40.53
CDX70596 Canola nucleus 40.53 40.13
CDX69546 Canola nucleus 40.86 39.81
CDX85054 Canola nucleus 40.53 39.74
CDY70306 Canola nucleus 37.54 38.7
HORVU4Hr1G075180.3 Barley nucleus, plastid 50.17 38.32
CDX67451 Canola nucleus 21.59 36.52
CDY11680 Canola nucleus 21.59 36.52
HORVU4Hr1G075170.1 Barley nucleus 30.9 36.33
Os10t0404900-01 Rice nucleus 42.19 35.77
Zm00001d014201_P001 Maize nucleus 40.53 35.06
EER94272 Sorghum nucleus 41.86 34.81
Zm00001d033005_P001 Maize nucleus 39.2 32.51
CDX99719 Canola nucleus 20.27 31.28
CDY33168 Canola nucleus 18.94 30.16
CDY69536 Canola nucleus 15.61 30.13
CDX75029 Canola nucleus 18.27 29.41
CDY37519 Canola nucleus 25.25 29.23
CDY28673 Canola nucleus 26.25 29.04
CDY25596 Canola nucleus 25.58 28.95
CDY28803 Canola nucleus 14.95 28.85
CDX69357 Canola nucleus 27.91 28.47
CDY69618 Canola nucleus 28.57 28.2
CDY67332 Canola nucleus 28.57 28.2
CDY49056 Canola nucleus 24.58 28.14
CDY33967 Canola nucleus 28.9 28.06
CDY37819 Canola nucleus 28.9 28.06
CDX75697 Canola nucleus 27.24 27.8
CDY25597 Canola nucleus 27.24 27.42
CDX76923 Canola nucleus 28.24 27.42
CDY39476 Canola nucleus 25.58 27.3
CDY13761 Canola nucleus 27.91 27.01
CDX89467 Canola nucleus 26.91 27.0
CDX90376 Canola nucleus 25.25 26.67
CDY11269 Canola nucleus 18.94 26.15
CDY71532 Canola nucleus 19.6 25.88
CDX80887 Canola nucleus 18.6 25.69
CDY04896 Canola nucleus 19.27 25.55
CDX89136 Canola nucleus 18.94 24.89
CDY42007 Canola nucleus 17.94 24.66
CDX70283 Canola nucleus 17.94 24.66
CDY10356 Canola nucleus 18.6 24.35
CDY71047 Canola nucleus 18.6 24.35
CDX70284 Canola nucleus 18.6 24.35
CDX76591 Canola nucleus 18.27 24.02
CDY57869 Canola nucleus 18.27 23.91
CDY27308 Canola nucleus 17.28 22.71
CDX80037 Canola nucleus 18.94 22.44
CDY41547 Canola nucleus 18.6 22.05
Protein Annotations
Gene3D:1.10.10.60MapMan:15.5.3.1GO:A0A078JWT8UniProt:A0A078JWT8EnsemblPlants:CDY70870ProteinID:CDY70870
ProteinID:CDY70870.1ncoils:CoilGO:GO:0003674GO:GO:0003676GO:GO:0003677GO:GO:0003700
GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0006139
GO:GO:0006355GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0043565
EnsemblPlantsGene:GSBRNA2T00008147001InterPro:HTH_motifInterPro:Homeobox-like_sfInterPro:Homeobox_CSInterPro:Homeobox_domInterPro:IPR001356
InterPro:Leu_zip_homeoPFAM:PF00046PFAM:PF02183PRINTS:PR00031ScanProsite:PS00027PFscan:PS50071
PANTHER:PTHR24326PANTHER:PTHR24326:SF176SMART:SM00389SUPFAM:SSF46689UniParc:UPI0004EDDAFCSEG:seg
Description
BnaCnng70120DBnaCnng70120D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JWT8]
Coordinates
chrLK043598:-:214..1917
Molecular Weight (calculated)
34169.9 Da
IEP (calculated)
6.169
GRAVY (calculated)
-0.782
Length
301 amino acids
Sequence
(BLAST)
001: MSCNNGMSFF PSNFMIQTSY EDLPPSLSPL LPSCSIPQDL HGFASFLGKR SPVEGLEAGN IMNGEEDYSD DGSQMGEKKR RLNMEQVKTL EKNFELGNKL
101: DPERKMQLAR ALGLQPRQIA IWFQNRRARW KTKQLEKDYD TLKRQFDSLK AENDHLQTHN QKLQAENRVL NTIAFLCLSH YTIMSSRNRE QTESINLNKE
201: TEGSCSNRSD NSSDNFRLDI STAVPSVDST ITGGHPPAPQ TVGRHFFPPA TATTTTTTMQ FFQNSSSGQS MVKEENSISN MFCAMDDHSG FWPWLDQQQY
301: N
Best Arabidopsis Sequence Match ( AT1G69780.1 )
(BLAST)
001: MSCNNGMSFF PSNFMIQTSY EDDHPHQSPS LAPLLPSCSL PQDLHGFASF LGKRSPMEGC CDLETGNNMN GEEDYSDDGS QMGEKKRRLN MEQVKTLEKN
101: FELGNKLEPE RKMQLARALG LQPRQIAIWF QNRRARWKTK QLEKDYDTLK RQFDTLKAEN DLLQTHNQKL QAEIMGLKNR EQTESINLNK ETEGSCSNRS
201: DNSSDNLRLD ISTAPPSNDS TLTGGHPPPP QTVGRHFFPP SPATATTTTT TMQFFQNSSS GQSMVKEENS ISNMFCAMDD HSGFWPWLDQ QQYN
Arabidopsis Description
ATHB-13Homeobox-leucine zipper protein ATHB-13 [Source:UniProtKB/Swiss-Prot;Acc:Q8LC03]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.