Factsheet for Zm00001d033005_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER94272	Sorghum	nucleus	80.99	81.22
Zm00001d014201_P001	Maize	nucleus	76.03	79.31
Os10t0404900-01	Rice	nucleus	64.46	65.92
TraesCS4B01G287600.1	Wheat	nucleus	51.24	56.19
Zm00001d027852_P001	Maize	nucleus	53.17	56.1
Zm00001d048312_P001	Maize	nucleus	52.62	55.52
TraesCS4D01G286400.2	Wheat	nucleus	51.24	54.87
TraesCS4A01G016600.1	Wheat	nucleus, plastid	50.14	53.85
GSMUA_Achr1P21620_001	Banana	nucleus	40.77	52.67
GSMUA_Achr6P10660_001	Banana	nucleus	41.05	52.65
GSMUA_Achr2P07420_001	Banana	nucleus	41.32	51.37
GSMUA_Achr1P12270_001	Banana	nucleus	40.22	49.83
GSMUA_Achr10P...	Banana	nucleus	38.57	48.95
GSMUA_Achr7P11600_001	Banana	nucleus	36.64	48.19
HORVU4Hr1G075180.3	Barley	nucleus, plastid	51.52	47.46
PGSC0003DMT400002259	Potato	nucleus	30.3	46.81
VIT_01s0026g01950.t01	Wine grape	nucleus	36.64	46.67
GSMUA_Achr3P21430_001	Banana	nucleus	33.33	45.49
PGSC0003DMT400065805	Potato	nucleus	37.19	44.12
Solyc01g010600.2.1	Tomato	nucleus	29.48	44.03
Solyc05g007180.2.1	Tomato	nucleus	36.91	43.93
KRH69308	Soybean	nucleus	35.54	43.73
KRG99129	Soybean	nucleus	33.61	43.73
KRH74821	Soybean	nucleus	34.99	43.64
Bra003980.1-P	Field mustard	nucleus	30.03	43.25
CDY48391	Canola	nucleus	30.03	43.25
KRH45876	Soybean	nucleus	33.06	42.86
GSMUA_Achr7P20950_001	Banana	nucleus	27.82	42.8
VIT_14s0108g00390.t01	Wine grape	nucleus	33.33	42.76
GSMUA_Achr6P36450_001	Banana	nucleus	27.27	42.67
KRG99070	Soybean	nucleus	20.11	42.44
Bra016266.1-P	Field mustard	nucleus	33.61	42.36
CDY44091	Canola	nucleus	30.85	42.11
CDY11659	Canola	nucleus	33.33	42.01
AT1G69780.1	Thale cress	nucleus	33.88	41.84
GSMUA_Achr4P00550_001	Banana	nucleus	32.23	41.79
CDY38759	Canola	nucleus	32.51	41.55
CDY23547	Canola	nucleus	31.96	41.43
Bra007881.1-P	Field mustard	nucleus	32.51	41.4
CDY70870	Canola	nucleus	32.51	39.2
HORVU4Hr1G075170.1	Barley	nucleus	27.55	39.06
Zm00001d020804_P001	Maize	nucleus	25.07	34.87
Zm00001d017422_P001	Maize	nucleus	20.11	31.06
Zm00001d005951_P001	Maize	nucleus	24.79	29.51
Zm00001d050310_P001	Maize	nucleus	20.11	26.84
Zm00001d032316_P001	Maize	nucleus	19.83	26.67
Zm00001d027991_P001	Maize	nucleus	22.86	25.46
Zm00001d005692_P001	Maize	nucleus	19.83	25.44
Zm00001d030532_P002	Maize	nucleus	21.21	25.25
Zm00001d021268_P001	Maize	nucleus	16.25	24.69
Zm00001d025964_P001	Maize	nucleus	17.63	23.88
Zm00001d006195_P001	Maize	nucleus	15.98	23.77
Zm00001d017920_P001	Maize	nucleus	21.49	23.64
Zm00001d051749_P001	Maize	nucleus	21.49	23.01
Zm00001d002799_P001	Maize	nucleus	16.53	22.99
Zm00001d048227_P001	Maize	extracellular, nucleus, plastid	19.28	18.92

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:100285049	MapMan:15.5.3.1	UniProt:A0A1D6KVR5	ncoils:Coil	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:HTH_motif	InterPro:Homeobox-like_sf	InterPro:Homeobox_CS
InterPro:Homeobox_dom	InterPro:IPR001356	InterPro:Leu_zip_homeo	ProteinID:ONM06594.1	PFAM:PF00046	PFAM:PF02183
PRINTS:PR00031	ScanProsite:PS00027	PFscan:PS50071	PANTHER:PTHR24326	PANTHER:PTHR24326:SF225	SMART:SM00389
SUPFAM:SSF46689	UniParc:UPI000221EC2E	EnsemblPlantsGene:Zm00001d033005	EnsemblPlants:Zm00001d033005_P001	EnsemblPlants:Zm00001d033005_T001	SEG:seg

Description

Homeobox-transcription factor 49Homeobox-leucine zipper protein HAT7

Coordinates

chr1:-:246790551..246792861

Molecular Weight (calculated)

38899.3 Da

IEP (calculated)

6.125

GRAVY (calculated)

-0.666

Length

363 amino acids

Sequence
(BLAST)

001: MKPMATNGMA PSFYPANFLL QMQQALPHHY QQQEQHHEGH DDEDHEAAHH LLAPPPAALV SPFLHDFGGA MAAAPPPPML AGGFGGKRMY PDVGGMAGDD
101: SHHLHAEPQQ QQEQQASDDE EEGSAAVGGG ERKRRLSVDQ VRTLERSFEV ANKLEPERKA QLARALGLQP RQVAIWFQNR RARWKTKQLE KDYDALRRQL
201: DAARAENDAL LSHNKKLQAE IMALKGGGGG GGRQEAASEL INLNVRETEA SCSENNSSEI NGLDVSRPDP AAGESPAMNS YRGGLPFYAS AAARADIHHQ
301: LLHSGGQPSP AAAAPPKMEL APGSPPATAG GGGGTFGSLL CGAAVDEPPP FWSWADGHHT CFQ

Best Arabidopsis Sequence Match ( AT1G69780.1 )
(BLAST)

001: MSCNNGMSFF PSNFMIQTSY EDDHPHQSPS LAPLLPSCSL PQDLHGFASF LGKRSPMEGC CDLETGNNMN GEEDYSDDGS QMGEKKRRLN MEQVKTLEKN
101: FELGNKLEPE RKMQLARALG LQPRQIAIWF QNRRARWKTK QLEKDYDTLK RQFDTLKAEN DLLQTHNQKL QAEIMGLKNR EQTESINLNK ETEGSCSNRS
201: DNSSDNLRLD ISTAPPSNDS TLTGGHPPPP QTVGRHFFPP SPATATTTTT TMQFFQNSSS GQSMVKEENS ISNMFCAMDD HSGFWPWLDQ QQYN

Arabidopsis Description

ATHB-13Homeobox-leucine zipper protein ATHB-13 [Source:UniProtKB/Swiss-Prot;Acc:Q8LC03]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.