Factsheet for Zm00001d048227_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid, extracellular, nucleus

Predictor Summary:

plastid 3
extracellular 3
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, nucleus, plastid
Any Predictor:	nucleus, plastid, secretory
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d027991_P001	Maize	nucleus	59.19	67.18
EER92730	Sorghum	nucleus	58.11	66.36
Os03t0188900-01	Rice	nucleus	48.92	58.2
TraesCS4B01G305300.1	Wheat	nucleus	48.11	56.33
TraesCS4A01G405800.1	Wheat	nucleus	43.24	56.14
TraesCS4D01G303500.1	Wheat	nucleus	47.84	56.01
Zm00001d030532_P002	Maize	nucleus	37.3	45.25
HORVU4Hr1G078410.5	Barley	nucleus, plastid	36.22	40.73
Zm00001d020804_P001	Maize	nucleus	27.03	38.31
GSMUA_Achr6P10310_001	Banana	nucleus	21.35	38.16
GSMUA_Achr10P...	Banana	nucleus	25.41	38.06
GSMUA_Achr7P12740_001	Banana	nucleus	22.43	36.4
GSMUA_Achr10P...	Banana	nucleus	18.38	35.79
GSMUA_Achr7P11760_001	Banana	nucleus	23.51	34.52
GSMUA_Achr3P06620_001	Banana	nucleus	25.41	34.31
Zm00001d005951_P001	Maize	nucleus	27.57	33.44
GSMUA_Achr9P14960_001	Banana	nucleus	22.97	30.25
GSMUA_Achr2P14750_001	Banana	extracellular, nucleus	22.97	29.72
GSMUA_Achr10P...	Banana	nucleus	21.08	29.66
Zm00001d017422_P001	Maize	nucleus	15.41	24.26
Zm00001d017920_P001	Maize	nucleus	20.54	23.03
Zm00001d032316_P001	Maize	nucleus	16.76	22.96
Zm00001d050310_P001	Maize	nucleus	16.76	22.79
Zm00001d051749_P001	Maize	nucleus	20.54	22.42
Zm00001d025964_P001	Maize	nucleus	15.14	20.9
Zm00001d005692_P001	Maize	nucleus	15.95	20.85
Zm00001d002799_P001	Maize	nucleus	14.59	20.69
Zm00001d014201_P001	Maize	nucleus	18.65	19.83
Zm00001d048312_P001	Maize	nucleus	18.38	19.77
Zm00001d021268_P001	Maize	nucleus	12.7	19.67
Zm00001d027852_P001	Maize	nucleus	18.11	19.48
Zm00001d033005_P001	Maize	nucleus	18.92	19.28
Zm00001d006195_P001	Maize	nucleus	12.43	18.85

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.1	UniProt:A0A1D6PIK5	ProteinID:AQL09152.1	ncoils:Coil	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:Homeobox-like_sf	InterPro:Homeobox_CS	InterPro:Homeobox_dom
InterPro:IPR001356	InterPro:Leu_zip_homeo	PFAM:PF00046	PFAM:PF02183	ScanProsite:PS00027	PFscan:PS50071
PANTHER:PTHR24326	PANTHER:PTHR24326:SF300	SMART:SM00389	SUPFAM:SSF46689	SignalP:SignalP-noTM	UniParc:UPI0008424E08
EnsemblPlantsGene:Zm00001d048227	EnsemblPlants:Zm00001d048227_P001	EnsemblPlants:Zm00001d048227_T001	SEG:seg	:	:

Description

Homeobox-transcription factor 12Putative homeobox DNA-binding and leucine zipper domain family protein

Coordinates

chr9:-:152791018..152793577

Molecular Weight (calculated)

39875.5 Da

IEP (calculated)

8.092

GRAVY (calculated)

-0.439

Length

370 amino acids

Sequence
(BLAST)

001: MAAWVSCLHL WPLSLSLSLS LSTPSLTPVL QSCSARKEIG ITANSFVRAT RLLLFQDPCR SLTIESPPFP NPFQSSAAKC RSQMKRQSKR PTASRDSPET
101: GTVDKQLALA ESLTARKTEP DELGEKKRRL APDQVRALER CFEADNRLDP DRKARVARDL ALNPRQVAVW FQNRRARWKA KALHRDFAAL RARHDALRRD
201: KDALAAEIRE LRQKLAEPAA VKTEATGSDT AEARPTTTTT AGAPAPPAGG CKDGSSDSDS SVVLNDDVDA SPYSGAAFEQ PGAFAGFGAP FLAASAAAAP
301: PPTGCSSPPV FETKWQHGPT TYAFESYKSC CAGYGFTEEW LASSDVVGSD GAAGFFSEDH ASSLNFSCYT

Best Arabidopsis Sequence Match ( AT5G65310.2 )
(BLAST)

001: MILTDKQISP RPTTTGFLYS GAGDYSQMFD ALEDDGSLED LGGVGHASST AAEKKRRLGV EQVKALEKNF EIDNKLEPER KVKLAQELGL QPRQVAIWFQ
101: NRRARWKTKQ LERDYGVLKS NFDALKRNRD SLQRDNDSLL GQIKELKAKL NVEGVKGIEE NGALKAVEAN QSVMANNEVL ELSHRSPSPP PHIPTDAPTS
201: ELAFEMFSIF PRTENFRDDP ADSSDSSAVL NEEYSPNTVE AAGAVAATTV EMSTMGCFSQ FVKMEEHEDL FSGEEACKLF ADNEQWYCSD QWNS

Arabidopsis Description

ATHB-5Homeobox-leucine zipper protein ATHB-5 [Source:UniProtKB/Swiss-Prot;Acc:P46667]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.