Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER92780 | Sorghum | nucleus | 90.12 | 87.32 |
| Zm00001d048312_P001 | Maize | nucleus | 82.85 | 82.85 |
| TraesCS4B01G287600.1 | Wheat | nucleus | 72.97 | 75.83 |
| TraesCS4D01G286400.2 | Wheat | nucleus | 73.26 | 74.34 |
| TraesCS4A01G016600.1 | Wheat | nucleus, plastid | 71.8 | 73.08 |
| HORVU4Hr1G075180.3 | Barley | nucleus, plastid | 74.42 | 64.97 |
| GSMUA_Achr1P21620_001 | Banana | nucleus | 52.33 | 64.06 |
| GSMUA_Achr2P07420_001 | Banana | nucleus | 52.62 | 61.99 |
| GSMUA_Achr7P11600_001 | Banana | nucleus | 49.42 | 61.59 |
| VIT_01s0026g01950.t01 | Wine grape | nucleus | 50.87 | 61.4 |
| GSMUA_Achr6P10660_001 | Banana | nucleus | 50.29 | 61.13 |
| GSMUA_Achr1P12270_001 | Banana | nucleus | 51.74 | 60.75 |
| GSMUA_Achr10P... | Banana | nucleus | 49.42 | 59.44 |
| KRH74821 | Soybean | nucleus | 49.71 | 58.76 |
| KRG99129 | Soybean | nucleus | 47.38 | 58.42 |
| KRH69308 | Soybean | nucleus | 50.0 | 58.31 |
| KRH45876 | Soybean | nucleus | 46.51 | 57.14 |
| PGSC0003DMT400065805 | Potato | nucleus | 50.58 | 56.86 |
| CDY44091 | Canola | nucleus | 43.9 | 56.77 |
| Solyc05g007180.2.1 | Tomato | nucleus | 50.29 | 56.72 |
| GSMUA_Achr3P21430_001 | Banana | nucleus | 43.6 | 56.39 |
| VIT_14s0108g00390.t01 | Wine grape | nucleus | 45.93 | 55.83 |
| PGSC0003DMT400002259 | Potato | nucleus | 38.08 | 55.74 |
| AT1G69780.1 | Thale cress | nucleus | 47.38 | 55.44 |
| Bra007881.1-P | Field mustard | nucleus | 45.93 | 55.44 |
| Zm00001d014201_P001 | Maize | nucleus | 55.81 | 55.17 |
| CDY38759 | Canola | nucleus | 45.35 | 54.93 |
| Bra016266.1-P | Field mustard | nucleus | 45.93 | 54.86 |
| CDY11659 | Canola | nucleus | 45.64 | 54.51 |
| Bra003980.1-P | Field mustard | nucleus | 38.95 | 53.17 |
| CDY48391 | Canola | nucleus | 38.95 | 53.17 |
| Zm00001d033005_P001 | Maize | nucleus | 56.1 | 53.17 |
| Solyc01g010600.2.1 | Tomato | nucleus | 37.5 | 53.09 |
| CDY70870 | Canola | nucleus | 45.93 | 52.49 |
| KRG99070 | Soybean | nucleus | 26.16 | 52.33 |
| GSMUA_Achr6P36450_001 | Banana | nucleus | 34.88 | 51.72 |
| CDY23547 | Canola | nucleus | 41.86 | 51.43 |
| GSMUA_Achr7P20950_001 | Banana | nucleus | 35.17 | 51.27 |
| HORVU4Hr1G075170.1 | Barley | nucleus | 37.79 | 50.78 |
| GSMUA_Achr4P00550_001 | Banana | nucleus | 41.28 | 50.71 |
| Zm00001d020804_P001 | Maize | nucleus | 25.0 | 32.95 |
| Zm00001d050310_P001 | Maize | nucleus | 25.58 | 32.35 |
| Zm00001d017422_P001 | Maize | nucleus | 21.8 | 31.91 |
| Zm00001d032316_P001 | Maize | nucleus | 24.42 | 31.11 |
| Zm00001d005951_P001 | Maize | nucleus | 25.0 | 28.2 |
| Zm00001d017920_P001 | Maize | nucleus | 26.16 | 27.27 |
| Zm00001d005692_P001 | Maize | nucleus | 22.38 | 27.21 |
| Zm00001d051749_P001 | Maize | nucleus | 25.87 | 26.25 |
| Zm00001d021268_P001 | Maize | nucleus | 18.02 | 25.94 |
| Zm00001d006195_P001 | Maize | nucleus | 17.44 | 24.59 |
| Zm00001d030532_P002 | Maize | nucleus | 21.8 | 24.59 |
| Zm00001d025964_P001 | Maize | nucleus | 18.9 | 24.25 |
| Zm00001d027991_P001 | Maize | nucleus | 22.67 | 23.93 |
| Zm00001d002799_P001 | Maize | nucleus | 17.73 | 23.37 |
| Zm00001d048227_P001 | Maize | extracellular, nucleus, plastid | 19.48 | 18.11 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.1 | UniProt:A0A060D3B5 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | InterPro:HTH_motif | InterPro:Homeobox-like_sf | InterPro:Homeobox_CS | InterPro:Homeobox_dom |
| InterPro:IPR001356 | EMBL:KJ728506 | InterPro:Leu_zip_homeo | ProteinID:ONL94115.1 | PFAM:PF00046 | PFAM:PF02183 |
| PRINTS:PR00031 | ScanProsite:PS00027 | PFscan:PS50071 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF176 | SMART:SM00389 |
| SUPFAM:SSF46689 | UniParc:UPI000221D979 | EnsemblPlantsGene:Zm00001d027852 | EnsemblPlants:Zm00001d027852_P001 | EnsemblPlants:Zm00001d027852_T001 | SEG:seg |
Description
Homeobox-transcription factor 102 Homeobox-transcription factor 102
Coordinates
chr1:-:15193281..15196074
Molecular Weight (calculated)
37606.2 Da
IEP (calculated)
6.767
GRAVY (calculated)
-0.696
Length
344 amino acids
Sequence
(BLAST)
(BLAST)
001: MRPMASNGMA SAPSPFFPPN FLLQMQQTPS DHEHQEQHHH HHHHKHHLAA PPLHPHHNPF LPSSQCPSLQ DFRGMAPIML GKRPMYGADV QVVGGEEVNG
101: CGGVNEDELS DDGSQAGGEK KRRLNVEQVR TLEKNFELGN KLEPERKLQL ARALGLQPRQ VAIWFQNRRA RWKTKQLEKD YDALKRQLDA VKADNDALLS
201: HNKKLQAEIL SLKGREAGGS SELINLNKET EASCSNRSEN SSEINLDISR APASEAPLDP TPPPGAGGGG MIPFYPPSVG GRPASAAGVD IDQLLHTSAP
301: KLEQHGSGGA VVVQAAETAS FGNLLCGVDE PPPFWPWADH QHFH
101: CGGVNEDELS DDGSQAGGEK KRRLNVEQVR TLEKNFELGN KLEPERKLQL ARALGLQPRQ VAIWFQNRRA RWKTKQLEKD YDALKRQLDA VKADNDALLS
201: HNKKLQAEIL SLKGREAGGS SELINLNKET EASCSNRSEN SSEINLDISR APASEAPLDP TPPPGAGGGG MIPFYPPSVG GRPASAAGVD IDQLLHTSAP
301: KLEQHGSGGA VVVQAAETAS FGNLLCGVDE PPPFWPWADH QHFH
001: MSCNNGMSFF PSNFMIQTSY EDDHPHQSPS LAPLLPSCSL PQDLHGFASF LGKRSPMEGC CDLETGNNMN GEEDYSDDGS QMGEKKRRLN MEQVKTLEKN
101: FELGNKLEPE RKMQLARALG LQPRQIAIWF QNRRARWKTK QLEKDYDTLK RQFDTLKAEN DLLQTHNQKL QAEIMGLKNR EQTESINLNK ETEGSCSNRS
201: DNSSDNLRLD ISTAPPSNDS TLTGGHPPPP QTVGRHFFPP SPATATTTTT TMQFFQNSSS GQSMVKEENS ISNMFCAMDD HSGFWPWLDQ QQYN
101: FELGNKLEPE RKMQLARALG LQPRQIAIWF QNRRARWKTK QLEKDYDTLK RQFDTLKAEN DLLQTHNQKL QAEIMGLKNR EQTESINLNK ETEGSCSNRS
201: DNSSDNLRLD ISTAPPSNDS TLTGGHPPPP QTVGRHFFPP SPATATTTTT TMQFFQNSSS GQSMVKEENS ISNMFCAMDD HSGFWPWLDQ QQYN
Arabidopsis Description
ATHB-13Homeobox-leucine zipper protein ATHB-13 [Source:UniProtKB/Swiss-Prot;Acc:Q8LC03]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.