Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY11659 | Canola | nucleus | 98.59 | 97.22 |
| Bra016266.1-P | Field mustard | nucleus | 98.24 | 96.88 |
| CDY44091 | Canola | nucleus | 84.15 | 89.85 |
| AT1G69780.1 | Thale cress | nucleus | 92.25 | 89.12 |
| CDY70870 | Canola | nucleus | 91.55 | 86.38 |
| CDY23547 | Canola | nucleus | 83.8 | 85.0 |
| CDY48391 | Canola | nucleus | 72.89 | 82.14 |
| CDY46427 | Canola | nucleus | 64.08 | 71.65 |
| CDY52767 | Canola | nucleus | 64.08 | 71.65 |
| VIT_01s0026g01950.t01 | Wine grape | nucleus | 66.2 | 65.96 |
| KRG99129 | Soybean | nucleus | 61.62 | 62.72 |
| KRH45876 | Soybean | nucleus | 61.27 | 62.14 |
| KRH74821 | Soybean | nucleus | 63.38 | 61.86 |
| KRH69308 | Soybean | nucleus | 63.73 | 61.36 |
| Solyc05g007180.2.1 | Tomato | nucleus | 62.68 | 58.36 |
| PGSC0003DMT400065805 | Potato | nucleus | 62.68 | 58.17 |
| KRG99070 | Soybean | nucleus | 32.39 | 53.49 |
| GSMUA_Achr7P11600_001 | Banana | nucleus | 51.06 | 52.54 |
| GSMUA_Achr1P21620_001 | Banana | nucleus | 51.41 | 51.96 |
| GSMUA_Achr4P00550_001 | Banana | nucleus | 51.06 | 51.79 |
| GSMUA_Achr6P36450_001 | Banana | nucleus | 42.25 | 51.72 |
| GSMUA_Achr10P... | Banana | nucleus | 51.76 | 51.4 |
| VIT_14s0108g00390.t01 | Wine grape | nucleus | 51.06 | 51.24 |
| GSMUA_Achr2P07420_001 | Banana | nucleus | 52.11 | 50.68 |
| GSMUA_Achr1P12270_001 | Banana | nucleus | 52.11 | 50.51 |
| GSMUA_Achr7P20950_001 | Banana | nucleus | 41.9 | 50.42 |
| GSMUA_Achr3P21430_001 | Banana | nucleus | 46.48 | 49.62 |
| GSMUA_Achr6P10660_001 | Banana | nucleus | 49.3 | 49.47 |
| Zm00001d027852_P001 | Maize | nucleus | 54.93 | 45.35 |
| TraesCS4B01G287600.1 | Wheat | nucleus | 52.46 | 45.02 |
| CDY69290 | Canola | nucleus | 39.44 | 44.8 |
| CDY69034 | Canola | nucleus | 42.25 | 44.78 |
| EER92780 | Sorghum | nucleus | 55.28 | 44.23 |
| TraesCS4D01G286400.2 | Wheat | nucleus | 52.46 | 43.95 |
| TraesCS4A01G016600.1 | Wheat | nucleus, plastid | 51.76 | 43.49 |
| CDY48942 | Canola | nucleus | 24.65 | 43.21 |
| Zm00001d048312_P001 | Maize | nucleus | 52.11 | 43.02 |
| CDX78614 | Canola | nucleus | 44.37 | 41.86 |
| CDX70596 | Canola | nucleus | 43.66 | 40.79 |
| CDY28696 | Canola | nucleus | 37.68 | 40.53 |
| CDX69546 | Canola | nucleus | 43.66 | 40.13 |
| CDX85054 | Canola | nucleus | 43.31 | 40.07 |
| CDY70306 | Canola | nucleus | 40.14 | 39.04 |
| HORVU4Hr1G075180.3 | Barley | nucleus, plastid | 52.46 | 37.82 |
| CDY11680 | Canola | nucleus | 23.24 | 37.08 |
| CDX67451 | Canola | nucleus | 23.24 | 37.08 |
| Os10t0404900-01 | Rice | nucleus | 44.72 | 35.77 |
| Zm00001d014201_P001 | Maize | nucleus | 43.31 | 35.34 |
| EER94272 | Sorghum | nucleus | 44.37 | 34.81 |
| HORVU4Hr1G075170.1 | Barley | nucleus | 30.99 | 34.38 |
| Zm00001d033005_P001 | Maize | nucleus | 41.55 | 32.51 |
| CDX99719 | Canola | nucleus | 21.13 | 30.77 |
| CDY69536 | Canola | nucleus | 16.55 | 30.13 |
| CDY28803 | Canola | nucleus | 16.55 | 30.13 |
| CDY28673 | Canola | nucleus | 28.52 | 29.78 |
| CDY33168 | Canola | nucleus | 19.72 | 29.63 |
| CDY37519 | Canola | nucleus | 26.76 | 29.23 |
| CDY25596 | Canola | nucleus | 27.11 | 28.95 |
| CDY49056 | Canola | nucleus | 26.76 | 28.9 |
| CDX75029 | Canola | nucleus | 19.01 | 28.88 |
| CDX69357 | Canola | nucleus | 29.23 | 28.14 |
| CDY69618 | Canola | nucleus | 29.93 | 27.87 |
| CDY67332 | Canola | nucleus | 29.93 | 27.87 |
| CDY71532 | Canola | nucleus | 22.18 | 27.63 |
| CDX75697 | Canola | nucleus | 28.52 | 27.46 |
| CDY25597 | Canola | nucleus | 28.87 | 27.42 |
| CDY33967 | Canola | nucleus | 29.93 | 27.42 |
| CDY37819 | Canola | nucleus | 29.93 | 27.42 |
| CDY39476 | Canola | nucleus | 27.11 | 27.3 |
| CDX76923 | Canola | nucleus | 29.58 | 27.1 |
| CDX89467 | Canola | nucleus | 28.52 | 27.0 |
| CDY13761 | Canola | nucleus | 29.23 | 26.69 |
| CDX90376 | Canola | nucleus | 26.76 | 26.67 |
| CDX89136 | Canola | nucleus | 21.48 | 26.64 |
| CDY11269 | Canola | nucleus | 19.72 | 25.69 |
| CDX80887 | Canola | nucleus | 19.37 | 25.23 |
| CDY04896 | Canola | nucleus | 20.07 | 25.11 |
| CDX76591 | Canola | nucleus | 20.07 | 24.89 |
| CDY57869 | Canola | nucleus | 20.07 | 24.78 |
| CDY27308 | Canola | nucleus | 19.72 | 24.45 |
| CDX80037 | Canola | nucleus | 21.83 | 24.41 |
| CDY41547 | Canola | nucleus | 21.48 | 24.02 |
| CDY10356 | Canola | nucleus | 19.37 | 23.91 |
| CDX70284 | Canola | nucleus | 19.37 | 23.91 |
| CDY71047 | Canola | nucleus | 19.37 | 23.91 |
| CDX70283 | Canola | nucleus | 18.31 | 23.74 |
| CDY42007 | Canola | nucleus | 18.31 | 23.74 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.1 | GO:A0A078HN17 | UniProt:A0A078HN17 | EnsemblPlants:CDY38759 | ProteinID:CDY38759 |
| ProteinID:CDY38759.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSBRNA2T00066551001 | InterPro:HTH_motif | InterPro:Homeobox-like_sf | InterPro:Homeobox_CS | InterPro:Homeobox_dom | InterPro:IPR001356 |
| InterPro:Leu_zip_homeo | PFAM:PF00046 | PFAM:PF02183 | PRINTS:PR00031 | ScanProsite:PS00027 | PFscan:PS50071 |
| PANTHER:PTHR24326 | PANTHER:PTHR24326:SF176 | SMART:SM00389 | SUPFAM:SSF46689 | UniParc:UPI0004EE9664 | SEG:seg |
Description
BnaA07g28310DBnaA07g28310D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HN17]
Coordinates
chrLK032432:+:32263..34016
Molecular Weight (calculated)
32077.7 Da
IEP (calculated)
5.392
GRAVY (calculated)
-0.746
Length
284 amino acids
Sequence
(BLAST)
(BLAST)
001: MSCNNGMSFF PSNFMIQTSY EDLPPSLSPL LPSCSIPQDL HGFASFLGKR SPIEVGNNMN GEEDYSDDGS HMGEKKRRLN MEQVKTLEKT FELGNKLEPE
101: MKMQLARALG LQPRQIAIWF QNRRARWKTK QLEKDYDTLK QQFDALKADN ELLQTHNQKL QAEIMGLKNK EQIESINLNK ETEGSCSNRS DNSSDNLRLD
201: ISTALPSVDS TITAGHPPAP QTVGRHFFPP SPAVATTTTT TMQFFQNSSS GQSMVKEENS ISNMLCAMDD HSGFWPWLDQ QQYN
101: MKMQLARALG LQPRQIAIWF QNRRARWKTK QLEKDYDTLK QQFDALKADN ELLQTHNQKL QAEIMGLKNK EQIESINLNK ETEGSCSNRS DNSSDNLRLD
201: ISTALPSVDS TITAGHPPAP QTVGRHFFPP SPAVATTTTT TMQFFQNSSS GQSMVKEENS ISNMLCAMDD HSGFWPWLDQ QQYN
001: MSCNNGMSFF PSNFMIQTSY EDDHPHQSPS LAPLLPSCSL PQDLHGFASF LGKRSPMEGC CDLETGNNMN GEEDYSDDGS QMGEKKRRLN MEQVKTLEKN
101: FELGNKLEPE RKMQLARALG LQPRQIAIWF QNRRARWKTK QLEKDYDTLK RQFDTLKAEN DLLQTHNQKL QAEIMGLKNR EQTESINLNK ETEGSCSNRS
201: DNSSDNLRLD ISTAPPSNDS TLTGGHPPPP QTVGRHFFPP SPATATTTTT TMQFFQNSSS GQSMVKEENS ISNMFCAMDD HSGFWPWLDQ QQYN
101: FELGNKLEPE RKMQLARALG LQPRQIAIWF QNRRARWKTK QLEKDYDTLK RQFDTLKAEN DLLQTHNQKL QAEIMGLKNR EQTESINLNK ETEGSCSNRS
201: DNSSDNLRLD ISTAPPSNDS TLTGGHPPPP QTVGRHFFPP SPATATTTTT TMQFFQNSSS GQSMVKEENS ISNMFCAMDD HSGFWPWLDQ QQYN
Arabidopsis Description
ATHB-13Homeobox-leucine zipper protein ATHB-13 [Source:UniProtKB/Swiss-Prot;Acc:Q8LC03]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.