Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra004516.1-P | Field mustard | nucleus | 100.0 | 100.0 |
| CDY41547 | Canola | nucleus | 97.24 | 97.24 |
| AT2G46680.1 | Thale cress | nucleus | 80.71 | 79.46 |
| CDY27308 | Canola | nucleus | 68.9 | 76.42 |
| CDX89136 | Canola | nucleus | 60.24 | 66.81 |
| CDY57869 | Canola | nucleus | 60.24 | 66.52 |
| CDX76591 | Canola | nucleus | 59.84 | 66.38 |
| CDY71532 | Canola | nucleus | 59.06 | 65.79 |
| KRH06407 | Soybean | nucleus | 50.0 | 51.84 |
| KRH47840 | Soybean | nucleus | 48.43 | 51.68 |
| VIT_15s0048g02870.t01 | Wine grape | nucleus | 49.21 | 51.44 |
| PGSC0003DMT400000694 | Potato | nucleus | 48.43 | 48.81 |
| Solyc01g096320.2.1 | Tomato | nucleus | 45.28 | 48.12 |
| GSMUA_Achr1P16280_001 | Banana | nucleus | 32.68 | 37.73 |
| EER99231 | Sorghum | nucleus | 35.43 | 37.04 |
| TraesCS5B01G317400.1 | Wheat | nucleus | 35.43 | 36.14 |
| HORVU5Hr1G081090.1 | Barley | nucleus | 35.43 | 36.0 |
| Os09t0528200-01 | Rice | nucleus | 35.04 | 35.74 |
| TraesCS5D01G323100.2 | Wheat | nucleus | 35.04 | 35.74 |
| TraesCS5A01G316800.1 | Wheat | nucleus | 34.65 | 35.34 |
| Zm00001d021268_P001 | Maize | nucleus | 33.07 | 35.15 |
| Zm00001d006195_P001 | Maize | nucleus | 32.28 | 33.61 |
| TraesCS2D01G387300.1 | Wheat | nucleus | 30.71 | 32.1 |
| CDX67451 | Canola | nucleus | 22.44 | 32.02 |
| CDY11680 | Canola | nucleus | 22.44 | 32.02 |
| GSMUA_Achr1P18670_001 | Banana | nucleus | 36.22 | 31.72 |
| TraesCS6A01G240400.1 | Wheat | nucleus | 27.17 | 31.22 |
| CDY48942 | Canola | nucleus | 19.68 | 30.86 |
| TraesCS6D01G222600.1 | Wheat | nucleus | 27.17 | 30.67 |
| Zm00001d017422_P001 | Maize | nucleus | 28.35 | 30.64 |
| TraesCS2B01G407600.1 | Wheat | nucleus | 31.1 | 30.38 |
| TraesCS6B01G284300.1 | Wheat | nucleus | 26.77 | 30.09 |
| EES05814 | Sorghum | nucleus | 29.53 | 30.0 |
| Os04t0541700-02 | Rice | nucleus | 31.89 | 29.35 |
| HORVU2Hr1G092710.2 | Barley | nucleus | 30.32 | 28.95 |
| TraesCS2A01G389400.1 | Wheat | nucleus | 29.92 | 28.68 |
| Zm00001d002799_P001 | Maize | nucleus | 29.13 | 28.35 |
| CDX99719 | Canola | nucleus | 21.65 | 28.21 |
| Zm00001d025964_P001 | Maize | nucleus | 29.53 | 27.99 |
| EES11198 | Sorghum | nucleus | 29.13 | 27.41 |
| Os02t0649300-01 | Rice | nucleus | 27.56 | 26.82 |
| CDX75029 | Canola | nucleus | 19.29 | 26.2 |
| CDY33168 | Canola | nucleus | 19.29 | 25.93 |
| CDY37519 | Canola | nucleus | 26.38 | 25.77 |
| CDY49056 | Canola | nucleus | 25.98 | 25.1 |
| CDY28803 | Canola | nucleus | 15.35 | 25.0 |
| CDY69536 | Canola | nucleus | 15.35 | 25.0 |
| CDY25596 | Canola | nucleus | 25.2 | 24.06 |
| CDY28673 | Canola | nucleus | 25.59 | 23.9 |
| CDX80887 | Canola | nucleus | 20.47 | 23.85 |
| CDY10356 | Canola | nucleus | 21.26 | 23.48 |
| CDX70284 | Canola | nucleus | 21.26 | 23.48 |
| CDY11269 | Canola | nucleus | 20.08 | 23.39 |
| CDY71047 | Canola | nucleus | 20.87 | 23.04 |
| CDY04896 | Canola | nucleus | 20.47 | 22.91 |
| CDX89467 | Canola | nucleus | 26.77 | 22.67 |
| CDY13761 | Canola | nucleus | 27.56 | 22.51 |
| CDY25597 | Canola | nucleus | 26.38 | 22.41 |
| CDY69618 | Canola | nucleus | 26.38 | 21.97 |
| CDX76923 | Canola | nucleus | 26.77 | 21.94 |
| CDY38759 | Canola | nucleus | 24.41 | 21.83 |
| CDY69290 | Canola | nucleus | 21.26 | 21.6 |
| CDY11659 | Canola | nucleus | 24.41 | 21.53 |
| CDX70283 | Canola | nucleus | 18.5 | 21.46 |
| CDY48391 | Canola | nucleus | 21.26 | 21.43 |
| CDX69357 | Canola | nucleus | 24.8 | 21.36 |
| CDX75697 | Canola | nucleus | 24.8 | 21.36 |
| CDY67332 | Canola | nucleus | 25.59 | 21.31 |
| CDY37819 | Canola | nucleus | 25.98 | 21.29 |
| CDY42007 | Canola | nucleus | 18.11 | 21.0 |
| CDY33967 | Canola | nucleus | 25.59 | 20.97 |
| HORVU6Hr1G061390.1 | Barley | nucleus | 25.98 | 20.75 |
| CDX90376 | Canola | nucleus | 23.23 | 20.7 |
| CDY44091 | Canola | nucleus | 21.65 | 20.68 |
| CDY23547 | Canola | nucleus | 22.44 | 20.36 |
| CDY39476 | Canola | nucleus | 22.44 | 20.21 |
| CDY69034 | Canola | nucleus | 21.26 | 20.15 |
| CDY52767 | Canola | nucleus | 19.68 | 19.68 |
| CDY46427 | Canola | nucleus | 19.68 | 19.68 |
| CDX78614 | Canola | nucleus | 23.23 | 19.6 |
| CDX85054 | Canola | nucleus | 23.62 | 19.54 |
| CDY70306 | Canola | nucleus | 22.44 | 19.52 |
| CDX69546 | Canola | nucleus | 23.62 | 19.42 |
| CDX70596 | Canola | nucleus | 23.23 | 19.41 |
| CDY70870 | Canola | nucleus | 22.44 | 18.94 |
| CDY28696 | Canola | nucleus | 19.29 | 18.56 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.1 | GO:A0A078CTI2 | EnsemblPlants:CDX80037 | ProteinID:CDX80037 | ProteinID:CDX80037.1 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | EnsemblPlantsGene:GSBRNA2T00132920001 | InterPro:HTH_motif | InterPro:Homeobox-like_sf | InterPro:Homeobox_CS | InterPro:Homeobox_dom |
| InterPro:IPR001356 | InterPro:Leu_zip_homeo | PFAM:PF00046 | PFAM:PF02183 | PRINTS:PR00031 | ScanProsite:PS00027 |
| PFscan:PS50071 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF122 | SMART:SM00389 | SUPFAM:SSF46689 | UniParc:UPI00025473BE |
| SEG:seg | : | : | : | : | : |
Description
BnaA05g01190D
Coordinates
chrLK031819:-:1453869..1455130
Molecular Weight (calculated)
29601.2 Da
IEP (calculated)
4.549
GRAVY (calculated)
-1.051
Length
254 amino acids
Sequence
(BLAST)
(BLAST)
001: MTEGEEYCLA RMSVDPFMAM KKSNYNKNNQ RRFSDEQIKS LEMMFESETK LEPRKKVQLA RELGLQPRQV AIWFQNKRAR WKSKQLETEF NILKQNYNDL
101: ASQFESLKKE KQALVSELHR LNEEVQKTHE EKRLCCGDQA AVVALSSTDH ESENEENTRR EQEEEVRPEM EVCEKGDDGV LCGHHNDDYD DGGYNNDIKR
201: EYFGGFGEEA DHLMNIVEPA DSCLTSSDDW GGFKSNANLL DQSSSNCPWW DFWS
101: ASQFESLKKE KQALVSELHR LNEEVQKTHE EKRLCCGDQA AVVALSSTDH ESENEENTRR EQEEEVRPEM EVCEKGDDGV LCGHHNDDYD DGGYNNDIKR
201: EYFGGFGEEA DHLMNIVEPA DSCLTSSDDW GGFKSNANLL DQSSSNCPWW DFWS
001: MTEGGEYSPA MMSAEPFLTM KKMKKSNHNK NNQRRFSDEQ IKSLEMMFES ETRLEPRKKV QLARELGLQP RQVAIWFQNK RARWKSKQLE TEYNILRQNY
101: DNLASQFESL KKEKQALVSE LQRLKEATQK KTQEEERQCS GDQAVVALSS THHESENEEN RRRKPEEVRP EMEMKDDKGH HGVMCDHHDY EDDDNGYSNN
201: IKREYFGGFE EEPDHLMNIV EPADSCLTSS DDWRGFKSDT TTLLDQSSNN YPWRDFWS
101: DNLASQFESL KKEKQALVSE LQRLKEATQK KTQEEERQCS GDQAVVALSS THHESENEEN RRRKPEEVRP EMEMKDDKGH HGVMCDHHDY EDDDNGYSNN
201: IKREYFGGFE EEPDHLMNIV EPADSCLTSS DDWRGFKSDT TTLLDQSSNN YPWRDFWS
Arabidopsis Description
ATHB-7Homeobox-leucine zipper protein ATHB-7 [Source:UniProtKB/Swiss-Prot;Acc:P46897]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.