Factsheet for Bra004516.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX80037	Canola	nucleus	100.0	100.0
AT2G46680.1	Thale cress	nucleus	80.71	79.46
Bra039265.1-P	Field mustard	nucleus	69.29	76.86
Bra014417.1-P	Field mustard	nucleus	60.24	67.11
Bra007637.1-P	Field mustard	nucleus	60.24	66.52
KRH06407	Soybean	nucleus	50.0	51.84
KRH47840	Soybean	nucleus	48.43	51.68
VIT_15s0048g02870.t01	Wine grape	nucleus	49.21	51.44
PGSC0003DMT400000694	Potato	nucleus	48.43	48.81
Solyc01g096320.2.1	Tomato	nucleus	45.28	48.12
GSMUA_Achr1P16280_001	Banana	nucleus	32.68	37.73
EER99231	Sorghum	nucleus	35.43	37.04
TraesCS5B01G317400.1	Wheat	nucleus	35.43	36.14
HORVU5Hr1G081090.1	Barley	nucleus	35.43	36.0
TraesCS5D01G323100.2	Wheat	nucleus	35.04	35.74
Os09t0528200-01	Rice	nucleus	35.04	35.74
TraesCS5A01G316800.1	Wheat	nucleus	34.65	35.34
Zm00001d021268_P001	Maize	nucleus	33.07	35.15
Zm00001d006195_P001	Maize	nucleus	32.28	33.61
TraesCS2D01G387300.1	Wheat	nucleus	30.71	32.1
Bra028454.1-P	Field mustard	nucleus	22.44	32.02
GSMUA_Achr1P18670_001	Banana	nucleus	36.22	31.72
TraesCS6A01G240400.1	Wheat	nucleus	27.17	31.22
TraesCS6D01G222600.1	Wheat	nucleus	27.17	30.67
Zm00001d017422_P001	Maize	nucleus	28.35	30.64
TraesCS2B01G407600.1	Wheat	nucleus	31.1	30.38
TraesCS6B01G284300.1	Wheat	nucleus	26.77	30.09
EES05814	Sorghum	nucleus	29.53	30.0
Os04t0541700-02	Rice	nucleus	31.89	29.35
HORVU2Hr1G092710.2	Barley	nucleus	30.32	28.95
TraesCS2A01G389400.1	Wheat	nucleus	29.92	28.68
Zm00001d002799_P001	Maize	nucleus	29.13	28.35
Zm00001d025964_P001	Maize	nucleus	29.53	27.99
EES11198	Sorghum	nucleus	29.13	27.41
Os02t0649300-01	Rice	nucleus	27.56	26.82
Bra039116.1-P	Field mustard	nucleus	26.38	25.77
Bra005259.1-P	Field mustard	nucleus	18.9	25.67
Bra022687.1-P	Field mustard	nucleus	14.96	24.36
Bra040519.1-P	Field mustard	nucleus	25.59	23.72
Bra009510.1-P	Field mustard	nucleus	21.26	23.48
Bra028820.1-P	Field mustard	nucleus	20.47	22.91
Bra030238.1-P	Field mustard	nucleus	26.38	22.56
Bra038523.1-P	Field mustard	nucleus	27.56	22.51
Bra016266.1-P	Field mustard	nucleus	24.41	21.53
Bra003980.1-P	Field mustard	nucleus	21.26	21.43
Bra011808.1-P	Field mustard	nucleus	24.8	21.36
Bra024377.1-P	Field mustard	nucleus	25.59	21.31
Bra031866.1-P	Field mustard	nucleus	25.98	21.29
Bra008717.1-P	Field mustard	nucleus	23.62	20.83
HORVU6Hr1G061390.1	Barley	nucleus	25.98	20.75
Bra006285.1-P	Field mustard	nucleus	22.83	20.49
Bra023506.1-P	Field mustard	nucleus	23.23	20.42
Bra010642.1-P	Field mustard	nucleus	22.83	20.28
Bra039135.1-P	Field mustard	nucleus	21.65	20.22
Bra007881.1-P	Field mustard	nucleus	22.44	20.0
Bra016300.1-P	Field mustard	nucleus	19.68	19.68

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.1	EnsemblPlantsGene:Bra004516	EnsemblPlants:Bra004516.1	EnsemblPlants:Bra004516.1-P	ncoils:Coil
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:HTH_motif	InterPro:Homeobox-like_sf
InterPro:Homeobox_CS	InterPro:Homeobox_dom	InterPro:IPR001356	InterPro:Leu_zip_homeo	UniProt:M4CJY2	PFAM:PF00046
PFAM:PF02183	PRINTS:PR00031	ScanProsite:PS00027	PFscan:PS50071	PANTHER:PTHR24326	PANTHER:PTHR24326:SF122
SMART:SM00389	SUPFAM:SSF46689	UniParc:UPI00025473BE	SEG:seg	:	:

Description

AT2G46680 (E=9e-091) ATHB-7, ATHB7 | ATHB-7 (ARABIDOPSIS THALIANA HOMEOBOX 7); transcription activator/ transcription factor

Coordinates

chrA05:+:577488..578489

Molecular Weight (calculated)

29601.2 Da

IEP (calculated)

4.549

GRAVY (calculated)

-1.051

Length

254 amino acids

Sequence
(BLAST)

001: MTEGEEYCLA RMSVDPFMAM KKSNYNKNNQ RRFSDEQIKS LEMMFESETK LEPRKKVQLA RELGLQPRQV AIWFQNKRAR WKSKQLETEF NILKQNYNDL
101: ASQFESLKKE KQALVSELHR LNEEVQKTHE EKRLCCGDQA AVVALSSTDH ESENEENTRR EQEEEVRPEM EVCEKGDDGV LCGHHNDDYD DGGYNNDIKR
201: EYFGGFGEEA DHLMNIVEPA DSCLTSSDDW GGFKSNANLL DQSSSNCPWW DFWS

Best Arabidopsis Sequence Match ( AT2G46680.1 )
(BLAST)

001: MTEGGEYSPA MMSAEPFLTM KKMKKSNHNK NNQRRFSDEQ IKSLEMMFES ETRLEPRKKV QLARELGLQP RQVAIWFQNK RARWKSKQLE TEYNILRQNY
101: DNLASQFESL KKEKQALVSE LQRLKEATQK KTQEEERQCS GDQAVVALSS THHESENEEN RRRKPEEVRP EMEMKDDKGH HGVMCDHHDY EDDDNGYSNN
201: IKREYFGGFE EEPDHLMNIV EPADSCLTSS DDWRGFKSDT TTLLDQSSNN YPWRDFWS

Arabidopsis Description

ATHB-7Homeobox-leucine zipper protein ATHB-7 [Source:UniProtKB/Swiss-Prot;Acc:P46897]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.