Factsheet for Bra005259.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX75029	Canola	nucleus	97.86	97.86
CDY33168	Canola	nucleus	91.98	91.01
AT2G36610.1	Thale cress	nucleus	64.17	64.86
KRH20007	Soybean	nucleus	46.52	39.37
KRH32628	Soybean	nucleus	45.99	38.22
VIT_08s0007g04200.t01	Wine grape	nucleus	41.71	35.45
Bra028820.1-P	Field mustard	nucleus	40.64	33.48
Bra009510.1-P	Field mustard	nucleus	41.18	33.48
Solyc09g008810.2.1	Tomato	nucleus	41.18	31.95
PGSC0003DMT400006949	Potato	nucleus	40.64	31.28
Bra028454.1-P	Field mustard	nucleus	24.6	25.84
Bra022687.1-P	Field mustard	nucleus	19.79	23.72
Bra014417.1-P	Field mustard	nucleus	26.2	21.49
Bra003980.1-P	Field mustard	nucleus	28.88	21.43
Bra008717.1-P	Field mustard	nucleus	32.62	21.18
Bra039135.1-P	Field mustard	nucleus	30.48	20.96
Bra016300.1-P	Field mustard	nucleus	28.34	20.87
Bra023506.1-P	Field mustard	nucleus	32.09	20.76
Bra007637.1-P	Field mustard	nucleus	25.13	20.43
Bra006285.1-P	Field mustard	nucleus	30.48	20.14
Bra039116.1-P	Field mustard	nucleus	27.27	19.62
Bra011808.1-P	Field mustard	nucleus	30.48	19.32
Bra007881.1-P	Field mustard	nucleus	29.41	19.3
Bra004516.1-P	Field mustard	nucleus	25.67	18.9
Bra030238.1-P	Field mustard	nucleus	29.95	18.86
Bra016266.1-P	Field mustard	nucleus	28.88	18.75
Bra039265.1-P	Field mustard	nucleus	22.46	18.34
Bra038523.1-P	Field mustard	nucleus	30.48	18.33
Bra040519.1-P	Field mustard	nucleus	26.74	18.25
Bra010642.1-P	Field mustard	nucleus	27.81	18.18
Bra024377.1-P	Field mustard	nucleus	28.34	17.38
Bra031866.1-P	Field mustard	nucleus	28.34	17.1

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.1	EnsemblPlantsGene:Bra005259	EnsemblPlants:Bra005259.1	EnsemblPlants:Bra005259.1-P	ncoils:Coil
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:HTH_motif	InterPro:Homeobox-like_sf	InterPro:Homeobox_CS
InterPro:Homeobox_dom	InterPro:IPR001356	UniProt:M4CM22	PFAM:PF00046	PRINTS:PR00031	ScanProsite:PS00027
PFscan:PS50071	PANTHER:PTHR24326	PANTHER:PTHR24326:SF287	SMART:SM00389	SUPFAM:SSF46689	UniParc:UPI0002547B89
SEG:seg	:	:	:	:	:

Description

AT2G36610 (E=8e-050) ATHB22 | ATHB22 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 22); DNA binding / transcription factor

Coordinates

chrA05:-:4330458..4331229

Molecular Weight (calculated)

21842.9 Da

IEP (calculated)

8.205

GRAVY (calculated)

-0.899

Length

187 amino acids

Sequence
(BLAST)

001: MEEDNMECWT SPFINGQSSS NFIYPFHSFN NVSGTILETQ GGRPLHEHYY AAPPAMVESS YGEASNTNNG YETKKKKMTN EQLKLLEISF QEEMKLDPDR
101: KMKLSKELGL QPRQIAVWFQ NRKARWKNKQ LEHLYKSLRQ EFDVICQEKK LLQEELMQLK AMIRENGASN NKQQTWGNAL SAQFQLN

Best Arabidopsis Sequence Match ( AT2G36610.1 )
(BLAST)

001: MEYWSSSFID GASSSSFISP FYNFDHFSGN QDNRCLGTMM GAQQDILHVP LAMVESGYGE ESNSFNGQEK KKKKMTSEQL KFLERSFQEE IKLNPDRKMK
101: LNPDRKMKLS KELGLQPRQI AVWFQNRKAR WKNKQLEHLY ESLRQEFDIV SREKELLQEE LIQLKSMIRE DSSCKKKQTW EKACS

Arabidopsis Description

ATHB-22Homeobox-leucine zipper protein ATHB-22 [Source:UniProtKB/Swiss-Prot;Acc:Q4PSR7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.