Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400006949 | Potato | nucleus | 97.93 | 97.12 |
| VIT_08s0007g04200.t01 | Wine grape | nucleus | 60.17 | 65.91 |
| KRH20007 | Soybean | nucleus | 55.19 | 60.18 |
| KRH32628 | Soybean | nucleus | 55.6 | 59.56 |
| KRG96107 | Soybean | nucleus | 49.38 | 55.61 |
| KRH67812 | Soybean | nucleus | 50.21 | 51.93 |
| CDY11269 | Canola | nucleus | 44.81 | 49.54 |
| CDX80887 | Canola | nucleus | 44.4 | 49.08 |
| AT5G03790.1 | Thale cress | nucleus | 46.47 | 47.66 |
| Bra009510.1-P | Field mustard | nucleus | 43.98 | 46.09 |
| CDX70284 | Canola | nucleus | 43.98 | 46.09 |
| CDY10356 | Canola | nucleus | 43.98 | 46.09 |
| CDY71047 | Canola | nucleus | 43.57 | 45.65 |
| CDY04896 | Canola | nucleus | 42.74 | 45.37 |
| Bra028820.1-P | Field mustard | nucleus | 42.32 | 44.93 |
| AT2G36610.1 | Thale cress | nucleus | 34.44 | 44.86 |
| CDX70283 | Canola | nucleus | 40.66 | 44.75 |
| CDY42007 | Canola | nucleus | 40.25 | 44.29 |
| CDY33168 | Canola | nucleus | 32.37 | 41.27 |
| Bra005259.1-P | Field mustard | nucleus | 31.95 | 41.18 |
| CDX75029 | Canola | nucleus | 31.95 | 41.18 |
| Solyc02g077590.1.1 | Tomato | nucleus | 20.75 | 27.93 |
| Solyc07g062790.1.1 | Tomato | nucleus | 19.92 | 27.59 |
| Solyc08g083130.2.1 | Tomato | extracellular, nucleus | 21.58 | 26.53 |
| Solyc01g010600.2.1 | Tomato | nucleus | 25.73 | 25.51 |
| Solyc04g074700.2.1 | Tomato | nucleus | 32.37 | 25.16 |
| Solyc05g006980.2.1 | Tomato | nucleus | 27.8 | 23.26 |
| Solyc02g086930.2.1 | Tomato | nucleus | 27.39 | 23.16 |
| Solyc02g067410.1.1 | Tomato | nucleus | 24.9 | 22.81 |
| Solyc01g096320.2.1 | Tomato | nucleus | 22.41 | 22.59 |
| Solyc05g051460.2.1 | Tomato | nucleus | 28.63 | 22.04 |
| Solyc03g082550.2.1 | Tomato | nucleus | 19.09 | 22.01 |
| Solyc03g113270.2.1 | Tomato | nucleus, plastid | 29.46 | 21.98 |
| Solyc04g005800.2.1 | Tomato | nucleus | 26.56 | 21.55 |
| Solyc06g053220.2.1 | Tomato | nucleus | 19.92 | 21.33 |
| Solyc02g087840.2.1 | Tomato | nucleus | 26.97 | 21.04 |
| Solyc05g007180.2.1 | Tomato | nucleus | 25.31 | 20.0 |
| Solyc11g010270.1.1 | Tomato | nucleus | 29.05 | 20.0 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | InterPro:HTH_motif | InterPro:Homeobox-like_sf | InterPro:Homeobox_CS | InterPro:Homeobox_dom | InterPro:IPR001356 |
| UniProt:K4CQR6 | InterPro:Leu_zip_homeo | PFAM:PF00046 | PFAM:PF02183 | PRINTS:PR00031 | ScanProsite:PS00027 |
| PFscan:PS50071 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF287 | SMART:SM00389 | SUPFAM:SSF46689 | EnsemblPlantsGene:Solyc09g008810.2 |
| EnsemblPlants:Solyc09g008810.2.1 | UniParc:UPI000276C0F6 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr9:-:2224847..2227824
Molecular Weight (calculated)
28000.0 Da
IEP (calculated)
8.376
GRAVY (calculated)
-0.858
Length
241 amino acids
Sequence
(BLAST)
(BLAST)
001: MDWNGNIRPF VSRQVIDNSL NFLYNYNYDQ YPGIEMKHAM QTQHGGVQVP TMDNNNNNFV LNQHQLDKKK RLSSDQLESL ENSFQEEIKL DPDRKMKLAK
101: ELGLQPRQIA VWFQNRRARW KAKQLERLYD SLKQDYDVVS REKQKLQDEV LALRAILKEQ ATKKQVNSTV YTEISGEETV ESTSMPSSNK TITRGVTISN
201: HQNNNINNNN NIAECSYVFN NVVDGLNPVM PPYWATLPTY P
101: ELGLQPRQIA VWFQNRRARW KAKQLERLYD SLKQDYDVVS REKQKLQDEV LALRAILKEQ ATKKQVNSTV YTEISGEETV ESTSMPSSNK TITRGVTISN
201: HQNNNINNNN NIAECSYVFN NVVDGLNPVM PPYWATLPTY P
001: MEWSTTSNVE NVRVAFMPPP WPESSSFNSL HSFNFDPYAG NSYTPGDTQT GPVISVPESE KIMNAYRFPN NNNEMIKKKR LTSGQLASLE RSFQEEIKLD
101: SDRKVKLSRE LGLQPRQIAV WFQNRRARWK AKQLEQLYDS LRQEYDVVSR EKQMLHDEVK KLRALLRDQG LIKKQISAGT IKVSGEEDTV EISSVVVAHP
201: RTENMNANQI TGGNQVYGQY NNPMLVASSG WPSYP
101: SDRKVKLSRE LGLQPRQIAV WFQNRRARWK AKQLEQLYDS LRQEYDVVSR EKQMLHDEVK KLRALLRDQG LIKKQISAGT IKVSGEEDTV EISSVVVAHP
201: RTENMNANQI TGGNQVYGQY NNPMLVASSG WPSYP
Arabidopsis Description
ATHB-51Putative homeobox-leucine zipper protein ATHB-51 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZR0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.