Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX80887 | Canola | nucleus | 79.15 | 85.32 |
| CDY71047 | Canola | nucleus | 82.98 | 84.78 |
| Bra009510.1-P | Field mustard | nucleus | 82.55 | 84.35 |
| CDY11269 | Canola | nucleus | 77.87 | 83.94 |
| CDY10356 | Canola | nucleus | 82.13 | 83.91 |
| CDX70284 | Canola | nucleus | 82.13 | 83.91 |
| CDY04896 | Canola | nucleus | 80.43 | 83.26 |
| Bra028820.1-P | Field mustard | nucleus | 80.0 | 82.82 |
| VIT_08s0007g04200.t01 | Wine grape | nucleus | 47.66 | 50.91 |
| PGSC0003DMT400006949 | Potato | nucleus | 48.51 | 46.91 |
| Solyc09g008810.2.1 | Tomato | nucleus | 47.66 | 46.47 |
| AT2G36610.1 | Thale cress | nucleus | 35.74 | 45.41 |
| AT5G53980.1 | Thale cress | nucleus | 17.87 | 26.92 |
| AT3G01470.1 | Thale cress | nucleus | 27.66 | 23.9 |
| AT3G61890.1 | Thale cress | nucleus | 22.55 | 22.55 |
| AT2G46680.1 | Thale cress | nucleus | 22.55 | 20.54 |
| AT1G26960.1 | Thale cress | nucleus | 21.7 | 20.0 |
| AT4G40060.1 | Thale cress | nucleus | 24.68 | 19.73 |
| AT2G22430.1 | Thale cress | nucleus | 25.96 | 19.61 |
| AT5G15150.1 | Thale cress | nucleus | 25.96 | 19.43 |
| AT1G69780.1 | Thale cress | nucleus | 24.26 | 19.39 |
| AT5G65310.1 | Thale cress | nucleus | 25.11 | 18.91 |
| AT3G01220.1 | Thale cress | nucleus | 22.55 | 18.53 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.1 | EntrezGene:831723 | ProteinID:AED90654.1 | ArrayExpress:AT5G03790 | EnsemblPlantsGene:AT5G03790 |
| RefSeq:AT5G03790 | TAIR:AT5G03790 | RefSeq:AT5G03790-TAIR-G | EnsemblPlants:AT5G03790.1 | TAIR:AT5G03790.1 | Symbol:ATHB51 |
| ProteinID:BAB08604.1 | ProteinID:CAB82944.1 | ncoils:Coil | GO:GO:0000003 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007275 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009653 | GO:GO:0009791 | GO:GO:0009908 | GO:GO:0009965 |
| GO:GO:0009987 | GO:GO:0010434 | GO:GO:0010582 | GO:GO:0043565 | GO:GO:0045893 | GO:GO:0048510 |
| InterPro:HTH_motif | InterPro:Homeobox-like_sf | InterPro:Homeobox_CS | InterPro:Homeobox_dom | InterPro:IPR001356 | RefSeq:NP_195999.2 |
| PFAM:PF00046 | PO:PO:0000037 | PO:PO:0000229 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009001 | PO:PO:0009005 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020128 | PO:PO:0025022 | PRINTS:PR00031 | ScanProsite:PS00027 | PFscan:PS50071 |
| PANTHER:PTHR24326 | PANTHER:PTHR24326:SF287 | UniProt:Q9LZR0 | SMART:SM00389 | SUPFAM:SSF46689 | UniParc:UPI000150582D |
| SEG:seg | : | : | : | : | : |
Description
ATHB-51Putative homeobox-leucine zipper protein ATHB-51 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZR0]
Coordinates
chr5:+:1004782..1006631
Molecular Weight (calculated)
26841.7 Da
IEP (calculated)
9.452
GRAVY (calculated)
-0.744
Length
235 amino acids
Sequence
(BLAST)
(BLAST)
001: MEWSTTSNVE NVRVAFMPPP WPESSSFNSL HSFNFDPYAG NSYTPGDTQT GPVISVPESE KIMNAYRFPN NNNEMIKKKR LTSGQLASLE RSFQEEIKLD
101: SDRKVKLSRE LGLQPRQIAV WFQNRRARWK AKQLEQLYDS LRQEYDVVSR EKQMLHDEVK KLRALLRDQG LIKKQISAGT IKVSGEEDTV EISSVVVAHP
201: RTENMNANQI TGGNQVYGQY NNPMLVASSG WPSYP
101: SDRKVKLSRE LGLQPRQIAV WFQNRRARWK AKQLEQLYDS LRQEYDVVSR EKQMLHDEVK KLRALLRDQG LIKKQISAGT IKVSGEEDTV EISSVVVAHP
201: RTENMNANQI TGGNQVYGQY NNPMLVASSG WPSYP
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.