Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc09g008810.2.1 | Tomato | nucleus | 97.12 | 97.93 |
| VIT_08s0007g04200.t01 | Wine grape | nucleus | 59.67 | 65.91 |
| KRH20007 | Soybean | nucleus | 54.73 | 60.18 |
| KRH32628 | Soybean | nucleus | 55.14 | 59.56 |
| KRG96107 | Soybean | nucleus | 48.56 | 55.14 |
| KRH67812 | Soybean | nucleus | 49.38 | 51.5 |
| CDY11269 | Canola | nucleus | 44.44 | 49.54 |
| CDX80887 | Canola | nucleus | 44.03 | 49.08 |
| AT5G03790.1 | Thale cress | nucleus | 46.91 | 48.51 |
| CDY10356 | Canola | nucleus | 44.03 | 46.52 |
| Bra009510.1-P | Field mustard | nucleus | 44.03 | 46.52 |
| CDX70284 | Canola | nucleus | 44.03 | 46.52 |
| CDY71047 | Canola | nucleus | 43.62 | 46.09 |
| CDY04896 | Canola | nucleus | 42.8 | 45.81 |
| Bra028820.1-P | Field mustard | nucleus | 42.39 | 45.37 |
| AT2G36610.1 | Thale cress | nucleus | 34.16 | 44.86 |
| CDX70283 | Canola | nucleus | 39.92 | 44.29 |
| CDY42007 | Canola | nucleus | 39.51 | 43.84 |
| CDY33168 | Canola | nucleus | 31.69 | 40.74 |
| CDX75029 | Canola | nucleus | 31.28 | 40.64 |
| Bra005259.1-P | Field mustard | nucleus | 31.28 | 40.64 |
| PGSC0003DMT400081296 | Potato | nucleus | 20.16 | 27.37 |
| PGSC0003DMT400032390 | Potato | nucleus | 19.75 | 27.12 |
| PGSC0003DMT400079230 | Potato | nucleus | 31.69 | 26.37 |
| PGSC0003DMT400003586 | Potato | nucleus | 25.93 | 26.36 |
| PGSC0003DMT400017751 | Potato | nucleus | 23.87 | 25.78 |
| PGSC0003DMT400002259 | Potato | nucleus | 24.28 | 25.11 |
| PGSC0003DMT400054818 | Potato | nucleus | 20.99 | 24.06 |
| PGSC0003DMT400001322 | Potato | nucleus | 27.16 | 23.16 |
| PGSC0003DMT400045471 | Potato | nucleus | 27.98 | 22.59 |
| PGSC0003DMT400000694 | Potato | nucleus | 23.05 | 22.22 |
| PGSC0003DMT400043251 | Potato | nucleus | 29.63 | 22.15 |
| PGSC0003DMT400047622 | Potato | nucleus | 19.34 | 21.96 |
| PGSC0003DMT400007376 | Potato | nucleus | 26.75 | 21.96 |
| PGSC0003DMT400065207 | Potato | nucleus | 29.22 | 21.71 |
| PGSC0003DMT400013968 | Potato | nucleus | 19.34 | 20.89 |
| PGSC0003DMT400065805 | Potato | nucleus | 25.51 | 20.26 |
| PGSC0003DMT400041655 | Potato | nucleus | 28.4 | 19.83 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:107059499 | MapMan:15.5.3.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | InterPro:HTH_motif | InterPro:Homeobox-like_sf | InterPro:Homeobox_CS | InterPro:Homeobox_dom |
| InterPro:IPR001356 | InterPro:Leu_zip_homeo | UniProt:M0ZS81 | PFAM:PF00046 | PFAM:PF02183 | EnsemblPlantsGene:PGSC0003DMG400002692 |
| PGSC:PGSC0003DMG400002692 | EnsemblPlants:PGSC0003DMT400006949 | PRINTS:PR00031 | ScanProsite:PS00027 | PFscan:PS50071 | PANTHER:PTHR24326 |
| PANTHER:PTHR24326:SF287 | SMART:SM00389 | SUPFAM:SSF46689 | UniParc:UPI0002968F46 | RefSeq:XP_015161550.1 | SEG:seg |
Description
Homeobox protein [Source:PGSC_GENE;Acc:PGSC0003DMG400002692]
Coordinates
chr9:+:4156189..4159105
Molecular Weight (calculated)
28277.4 Da
IEP (calculated)
8.376
GRAVY (calculated)
-0.867
Length
243 amino acids
Sequence
(BLAST)
(BLAST)
001: MDWNGNIRPF VSRPVIDNSL NFLYNYNYDQ YQGMEMKHAM QTQHGGVQVP TMDNNNNNNF VLNQHQLDKK KRLSSDQLES LENSFQEEIK LDPDRKMKLA
101: KELGLQPRQI AVWFQNRRAR WKAKQLERLY DSLKQDYDVV SREKQKLQDE VLALRAILKE QATKKQVNST VYTEISGEET VESTSMPSSN KTITRGITIS
201: NHQNNNNIMN NNNIAECSYV FNNVVDGLNP VMPPYWATLP TYP
101: KELGLQPRQI AVWFQNRRAR WKAKQLERLY DSLKQDYDVV SREKQKLQDE VLALRAILKE QATKKQVNST VYTEISGEET VESTSMPSSN KTITRGITIS
201: NHQNNNNIMN NNNIAECSYV FNNVVDGLNP VMPPYWATLP TYP
001: MEWSTTSNVE NVRVAFMPPP WPESSSFNSL HSFNFDPYAG NSYTPGDTQT GPVISVPESE KIMNAYRFPN NNNEMIKKKR LTSGQLASLE RSFQEEIKLD
101: SDRKVKLSRE LGLQPRQIAV WFQNRRARWK AKQLEQLYDS LRQEYDVVSR EKQMLHDEVK KLRALLRDQG LIKKQISAGT IKVSGEEDTV EISSVVVAHP
201: RTENMNANQI TGGNQVYGQY NNPMLVASSG WPSYP
101: SDRKVKLSRE LGLQPRQIAV WFQNRRARWK AKQLEQLYDS LRQEYDVVSR EKQMLHDEVK KLRALLRDQG LIKKQISAGT IKVSGEEDTV EISSVVVAHP
201: RTENMNANQI TGGNQVYGQY NNPMLVASSG WPSYP
Arabidopsis Description
ATHB-51Putative homeobox-leucine zipper protein ATHB-51 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZR0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.