Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc03g082550.2.1 | Tomato | nucleus | 87.38 | 89.47 |
| PGSC0003DMT400013968 | Potato | nucleus | 57.01 | 54.22 |
| PGSC0003DMT400000694 | Potato | nucleus | 45.79 | 38.89 |
| VIT_16s0098g01170.t01 | Wine grape | nucleus | 39.25 | 37.33 |
| KRH64347 | Soybean | nucleus | 37.85 | 33.06 |
| KRH53589 | Soybean | nucleus | 37.85 | 32.27 |
| Zm00001d006195_P001 | Maize | nucleus | 36.45 | 31.97 |
| EER99231 | Sorghum | nucleus | 35.98 | 31.69 |
| Zm00001d021268_P001 | Maize | nucleus | 35.05 | 31.38 |
| GSMUA_Achr1P16280_001 | Banana | nucleus | 32.24 | 31.36 |
| TraesCS6A01G240400.1 | Wheat | nucleus | 31.78 | 30.77 |
| Os09t0528200-01 | Rice | nucleus | 35.51 | 30.52 |
| HORVU5Hr1G081090.1 | Barley | nucleus | 35.05 | 30.0 |
| TraesCS5D01G323100.2 | Wheat | nucleus | 34.58 | 29.72 |
| TraesCS6D01G222600.1 | Wheat | nucleus | 30.84 | 29.33 |
| TraesCS5B01G317400.1 | Wheat | nucleus | 34.11 | 29.32 |
| TraesCS5A01G316800.1 | Wheat | nucleus | 34.11 | 29.32 |
| TraesCS6B01G284300.1 | Wheat | nucleus | 30.84 | 29.2 |
| Zm00001d017422_P001 | Maize | nucleus | 31.78 | 28.94 |
| Zm00001d002799_P001 | Maize | nucleus | 35.05 | 28.74 |
| TraesCS2D01G387300.1 | Wheat | nucleus | 32.24 | 28.4 |
| EES05814 | Sorghum | nucleus | 32.24 | 27.6 |
| EES11198 | Sorghum | nucleus | 34.11 | 27.04 |
| GSMUA_Achr1P18670_001 | Banana | nucleus | 36.45 | 26.9 |
| Zm00001d025964_P001 | Maize | nucleus | 33.64 | 26.87 |
| Os04t0541700-02 | Rice | nucleus | 34.58 | 26.81 |
| TraesCS2B01G407600.1 | Wheat | nucleus | 32.24 | 26.54 |
| Os02t0649300-01 | Rice | nucleus | 32.24 | 26.44 |
| TraesCS2A01G389400.1 | Wheat | nucleus | 32.71 | 26.42 |
| PGSC0003DMT400032390 | Potato | nucleus | 21.5 | 25.99 |
| HORVU2Hr1G092710.2 | Barley | nucleus | 31.78 | 25.56 |
| PGSC0003DMT400081296 | Potato | nucleus | 20.56 | 24.58 |
| PGSC0003DMT400054818 | Potato | nucleus | 23.36 | 23.58 |
| PGSC0003DMT400002259 | Potato | nucleus | 25.7 | 23.4 |
| PGSC0003DMT400017751 | Potato | nucleus | 24.3 | 23.11 |
| PGSC0003DMT400003586 | Potato | nucleus | 24.3 | 21.76 |
| HORVU6Hr1G061390.1 | Barley | nucleus | 29.91 | 20.13 |
| PGSC0003DMT400001322 | Potato | nucleus | 26.64 | 20.0 |
| PGSC0003DMT400006949 | Potato | nucleus | 21.96 | 19.34 |
| PGSC0003DMT400007376 | Potato | nucleus | 26.64 | 19.26 |
| PGSC0003DMT400065805 | Potato | nucleus | 26.64 | 18.63 |
| PGSC0003DMT400079230 | Potato | nucleus | 24.77 | 18.15 |
| PGSC0003DMT400065207 | Potato | nucleus | 27.57 | 18.04 |
| PGSC0003DMT400043251 | Potato | nucleus | 26.64 | 17.54 |
| PGSC0003DMT400041655 | Potato | nucleus | 28.5 | 17.53 |
| PGSC0003DMT400045471 | Potato | nucleus | 24.3 | 17.28 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:102585726 | MapMan:15.5.3.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | InterPro:HTH_motif | InterPro:Homeobox-like_sf | InterPro:Homeobox_CS | InterPro:Homeobox_dom |
| InterPro:IPR001356 | InterPro:Leu_zip_homeo | UniProt:M1BL44 | PFAM:PF00046 | PFAM:PF02183 | EnsemblPlantsGene:PGSC0003DMG400018509 |
| PGSC:PGSC0003DMG400018509 | EnsemblPlants:PGSC0003DMT400047622 | PRINTS:PR00031 | ScanProsite:PS00027 | PFscan:PS50071 | PANTHER:PTHR24326 |
| PANTHER:PTHR24326:SF346 | SMART:SM00389 | SUPFAM:SSF46689 | UniParc:UPI000294DC6C | RefSeq:XP_006350490.1 | : |
Description
HD-ZIP [Source:PGSC_GENE;Acc:PGSC0003DMG400018509]
Coordinates
chr3:+:47819901..47821075
Molecular Weight (calculated)
25307.4 Da
IEP (calculated)
4.821
GRAVY (calculated)
-1.114
Length
214 amino acids
Sequence
(BLAST)
(BLAST)
001: MEPELENSEI SNFKKPFKNK CENVKRFTDE QVKLLETMFK LGTKIEPREK LKLARELGLQ PRQVAIWFQN KRARWKSKQL EHEYRILQSN FDNLNMQFES
101: LKTEKERLLI QLETLNDQLE NNNTRGSGSQ DSRDSELQHT SPENGFTELE LKDCSGSRFD HKSINEEDDD TRDKYFTPKE ESELWNLEEL GDNNSLEHWC
201: VGLGSISNSK LWDF
101: LKTEKERLLI QLETLNDQLE NNNTRGSGSQ DSRDSELQHT SPENGFTELE LKDCSGSRFD HKSINEEDDD TRDKYFTPKE ESELWNLEEL GDNNSLEHWC
201: VGLGSISNSK LWDF
001: MTEGGEYSPA MMSAEPFLTM KKMKKSNHNK NNQRRFSDEQ IKSLEMMFES ETRLEPRKKV QLARELGLQP RQVAIWFQNK RARWKSKQLE TEYNILRQNY
101: DNLASQFESL KKEKQALVSE LQRLKEATQK KTQEEERQCS GDQAVVALSS THHESENEEN RRRKPEEVRP EMEMKDDKGH HGVMCDHHDY EDDDNGYSNN
201: IKREYFGGFE EEPDHLMNIV EPADSCLTSS DDWRGFKSDT TTLLDQSSNN YPWRDFWS
101: DNLASQFESL KKEKQALVSE LQRLKEATQK KTQEEERQCS GDQAVVALSS THHESENEEN RRRKPEEVRP EMEMKDDKGH HGVMCDHHDY EDDDNGYSNN
201: IKREYFGGFE EEPDHLMNIV EPADSCLTSS DDWRGFKSDT TTLLDQSSNN YPWRDFWS
Arabidopsis Description
ATHB-7Homeobox-leucine zipper protein ATHB-7 [Source:UniProtKB/Swiss-Prot;Acc:P46897]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.