Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY48942 | Canola | nucleus | 51.61 | 98.77 |
| Bra031866.1-P | Field mustard | nucleus | 97.42 | 97.42 |
| CDY37819 | Canola | nucleus | 96.77 | 96.77 |
| CDY69618 | Canola | nucleus | 80.97 | 82.3 |
| CDY67332 | Canola | nucleus | 80.65 | 81.97 |
| AT5G65310.1 | Thale cress | nucleus | 80.32 | 79.81 |
| KRH43132 | Soybean | nucleus | 48.71 | 48.4 |
| KRH59287 | Soybean | nucleus | 47.1 | 47.56 |
| CDY25597 | Canola | nucleus | 44.84 | 46.49 |
| CDX89467 | Canola | nucleus | 44.84 | 46.33 |
| CDY25596 | Canola | nucleus | 39.68 | 46.24 |
| KRH31331 | Soybean | nucleus | 46.77 | 46.18 |
| Solyc05g051460.2.1 | Tomato | nucleus | 45.48 | 45.05 |
| KRG97544 | Soybean | nucleus | 46.77 | 45.03 |
| VIT_07s0191g00180.t01 | Wine grape | nucleus | 48.39 | 44.78 |
| CDX69357 | Canola | nucleus | 42.58 | 44.75 |
| CDY13761 | Canola | nucleus | 44.84 | 44.69 |
| CDX76923 | Canola | nucleus | 44.19 | 44.19 |
| CDX75697 | Canola | nucleus | 41.94 | 44.07 |
| PGSC0003DMT400043251 | Potato | nucleus | 46.13 | 44.0 |
| CDY39476 | Canola | nucleus | 40.0 | 43.97 |
| CDX99719 | Canola | nucleus | 27.1 | 43.08 |
| CDX90376 | Canola | nucleus | 38.71 | 42.11 |
| Solyc11g010270.1.1 | Tomato | nucleus | 46.77 | 41.43 |
| PGSC0003DMT400041655 | Potato | nucleus | 46.45 | 41.38 |
| CDY11680 | Canola | nucleus | 21.94 | 38.2 |
| CDX67451 | Canola | nucleus | 21.29 | 37.08 |
| CDY44091 | Canola | nucleus | 27.1 | 31.58 |
| CDY48391 | Canola | nucleus | 25.48 | 31.35 |
| CDY69290 | Canola | nucleus | 25.16 | 31.2 |
| CDY28803 | Canola | nucleus | 15.48 | 30.77 |
| CDY28673 | Canola | nucleus | 26.77 | 30.51 |
| CDY46427 | Canola | nucleus | 24.84 | 30.32 |
| CDY33168 | Canola | nucleus | 18.39 | 30.16 |
| CDY69536 | Canola | nucleus | 15.16 | 30.13 |
| CDY23547 | Canola | nucleus | 27.1 | 30.0 |
| CDY38759 | Canola | nucleus | 27.42 | 29.93 |
| CDY52767 | Canola | nucleus | 24.52 | 29.92 |
| CDY37519 | Canola | nucleus | 24.84 | 29.62 |
| CDX75029 | Canola | nucleus | 17.74 | 29.41 |
| CDY11659 | Canola | nucleus | 27.1 | 29.17 |
| CDY69034 | Canola | nucleus | 25.16 | 29.1 |
| CDY70870 | Canola | nucleus | 28.06 | 28.9 |
| CDY49056 | Canola | nucleus | 24.52 | 28.9 |
| CDY11269 | Canola | nucleus | 19.35 | 27.52 |
| CDX80887 | Canola | nucleus | 19.35 | 27.52 |
| CDY57869 | Canola | nucleus | 20.32 | 27.39 |
| CDX89136 | Canola | nucleus | 20.0 | 27.07 |
| CDX76591 | Canola | nucleus | 20.0 | 27.07 |
| CDY71047 | Canola | nucleus | 20.0 | 26.96 |
| CDY04896 | Canola | nucleus | 19.68 | 26.87 |
| CDY10356 | Canola | nucleus | 19.68 | 26.52 |
| CDX70284 | Canola | nucleus | 19.68 | 26.52 |
| CDY70306 | Canola | nucleus | 24.52 | 26.03 |
| CDX78614 | Canola | nucleus | 25.16 | 25.91 |
| CDY71532 | Canola | nucleus | 19.03 | 25.88 |
| CDX85054 | Canola | nucleus | 25.48 | 25.73 |
| CDX80037 | Canola | nucleus | 20.97 | 25.59 |
| CDX70283 | Canola | nucleus | 18.06 | 25.57 |
| CDX69546 | Canola | nucleus | 25.48 | 25.57 |
| CDY28696 | Canola | nucleus | 21.61 | 25.38 |
| CDX70596 | Canola | nucleus | 24.84 | 25.33 |
| CDY41547 | Canola | nucleus | 20.65 | 25.2 |
| CDY42007 | Canola | nucleus | 17.74 | 25.11 |
| CDY27308 | Canola | nucleus | 18.39 | 24.89 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.1 | GO:A0A078H8T3 | UniProt:A0A078H8T3 | EnsemblPlants:CDY33967 | ProteinID:CDY33967 |
| ProteinID:CDY33967.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSBRNA2T00055805001 | InterPro:HTH_motif | InterPro:Homeobox-like_sf | InterPro:Homeobox_CS | InterPro:Homeobox_dom | InterPro:IPR001356 |
| InterPro:Leu_zip_homeo | PFAM:PF00046 | PFAM:PF02183 | PRINTS:PR00031 | ScanProsite:PS00027 | PFscan:PS50071 |
| PANTHER:PTHR24326 | PANTHER:PTHR24326:SF196 | SMART:SM00389 | SUPFAM:SSF46689 | UniParc:UPI0004EE51E9 | SEG:seg |
Description
BnaC02g43700DBnaC02g43700D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H8T3]
Coordinates
chrLK032325:+:185251..187809
Molecular Weight (calculated)
34482.1 Da
IEP (calculated)
4.509
GRAVY (calculated)
-0.565
Length
310 amino acids
Sequence
(BLAST)
(BLAST)
001: MKRSRGSSDS LSGFLPICHS TADKQLSPRP TATGFLYPGG AGDYSQMFDG LEEDGSLEDI GVGHASSTAA AEKKRRLSVV QVKALEKNFE IDNKLEPERK
101: VKLAQELGLQ PRQVAIWFQN RRARWKTKQL ERDYGVLKSN FDSLKRSRDS LQRDNDYLLA EIKELRAKLD VEGTCGNNGN AVTEETDVVK TVETVAFQTV
201: IANDEVLELS QCPPLPREAQ ASELAYEMFS IFPRAESFRE DPADSSDSSA ILNEEYSPTA AAATAVEMST MGCFGQFVKM EEHEDLFSGE EACKLFADNE
301: QWFCSGQWSS
101: VKLAQELGLQ PRQVAIWFQN RRARWKTKQL ERDYGVLKSN FDSLKRSRDS LQRDNDYLLA EIKELRAKLD VEGTCGNNGN AVTEETDVVK TVETVAFQTV
201: IANDEVLELS QCPPLPREAQ ASELAYEMFS IFPRAESFRE DPADSSDSSA ILNEEYSPTA AAATAVEMST MGCFGQFVKM EEHEDLFSGE EACKLFADNE
301: QWFCSGQWSS
001: MKRSRGSSDS LSGFLPIRHS TTDKQISPRP TTTGFLYSGA GDYSQMFDAL EDDGSLEDLG GVGHASSTAA EKKRRLGVEQ VKALEKNFEI DNKLEPERKV
101: KLAQELGLQP RQVAIWFQNR RARWKTKQLE RDYGVLKSNF DALKRNRDSL QRDNDSLLGQ IKELKAKLNV EGVKGIEENG ALKAVEANQS VMANNEVLEL
201: SHRSPSPPPH IPTDAPTSEL AFEMFSIFPR TENFRDDPAD SSDSSAVLNE EYSPNTVEAA GAVAATTVEM STMGCFSQFV KMEEHEDLFS GEEACKLFAD
301: NEQWYCSDQW NS
101: KLAQELGLQP RQVAIWFQNR RARWKTKQLE RDYGVLKSNF DALKRNRDSL QRDNDSLLGQ IKELKAKLNV EGVKGIEENG ALKAVEANQS VMANNEVLEL
201: SHRSPSPPPH IPTDAPTSEL AFEMFSIFPR TENFRDDPAD SSDSSAVLNE EYSPNTVEAA GAVAATTVEM STMGCFSQFV KMEEHEDLFS GEEACKLFAD
301: NEQWYCSDQW NS
Arabidopsis Description
ATHB-5Homeobox-leucine zipper protein ATHB-5 [Source:UniProtKB/Swiss-Prot;Acc:P46667]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.