Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra031866.1-P | Field mustard | nucleus | 99.35 | 99.35 |
| CDY48942 | Canola | nucleus | 51.29 | 98.15 |
| CDY33967 | Canola | nucleus | 96.77 | 96.77 |
| CDY69618 | Canola | nucleus | 80.97 | 82.3 |
| CDY67332 | Canola | nucleus | 80.65 | 81.97 |
| AT5G65310.1 | Thale cress | nucleus | 82.26 | 81.73 |
| KRH43132 | Soybean | nucleus | 48.39 | 48.08 |
| KRH59287 | Soybean | nucleus | 46.77 | 47.23 |
| CDY25596 | Canola | nucleus | 40.0 | 46.62 |
| CDY25597 | Canola | nucleus | 44.84 | 46.49 |
| CDX89467 | Canola | nucleus | 44.84 | 46.33 |
| KRH31331 | Soybean | nucleus | 46.45 | 45.86 |
| CDX69357 | Canola | nucleus | 43.23 | 45.42 |
| CDX75697 | Canola | nucleus | 42.58 | 44.75 |
| CDY13761 | Canola | nucleus | 44.84 | 44.69 |
| KRG97544 | Soybean | nucleus | 46.13 | 44.41 |
| CDY39476 | Canola | nucleus | 40.32 | 44.33 |
| CDX76923 | Canola | nucleus | 44.19 | 44.19 |
| VIT_07s0191g00180.t01 | Wine grape | nucleus | 47.74 | 44.18 |
| Solyc05g051460.2.1 | Tomato | nucleus | 44.52 | 44.09 |
| CDX99719 | Canola | nucleus | 27.42 | 43.59 |
| PGSC0003DMT400043251 | Potato | nucleus | 45.16 | 43.08 |
| CDX90376 | Canola | nucleus | 39.03 | 42.46 |
| Solyc11g010270.1.1 | Tomato | nucleus | 45.81 | 40.57 |
| PGSC0003DMT400041655 | Potato | nucleus | 45.48 | 40.52 |
| CDY11680 | Canola | nucleus | 21.94 | 38.2 |
| CDX67451 | Canola | nucleus | 21.29 | 37.08 |
| CDY44091 | Canola | nucleus | 27.1 | 31.58 |
| CDY48391 | Canola | nucleus | 25.48 | 31.35 |
| CDY69290 | Canola | nucleus | 25.16 | 31.2 |
| CDY28673 | Canola | nucleus | 26.77 | 30.51 |
| CDY46427 | Canola | nucleus | 24.84 | 30.32 |
| CDY33168 | Canola | nucleus | 18.39 | 30.16 |
| CDY28803 | Canola | nucleus | 15.16 | 30.13 |
| CDY23547 | Canola | nucleus | 27.1 | 30.0 |
| CDY38759 | Canola | nucleus | 27.42 | 29.93 |
| CDY52767 | Canola | nucleus | 24.52 | 29.92 |
| CDY37519 | Canola | nucleus | 24.84 | 29.62 |
| CDY69536 | Canola | nucleus | 14.84 | 29.49 |
| CDX75029 | Canola | nucleus | 17.74 | 29.41 |
| CDY11659 | Canola | nucleus | 27.1 | 29.17 |
| CDY69034 | Canola | nucleus | 25.16 | 29.1 |
| CDY70870 | Canola | nucleus | 28.06 | 28.9 |
| CDY49056 | Canola | nucleus | 24.52 | 28.9 |
| CDX80887 | Canola | nucleus | 19.35 | 27.52 |
| CDY11269 | Canola | nucleus | 19.35 | 27.52 |
| CDY57869 | Canola | nucleus | 20.32 | 27.39 |
| CDX76591 | Canola | nucleus | 20.0 | 27.07 |
| CDX89136 | Canola | nucleus | 20.0 | 27.07 |
| CDY71047 | Canola | nucleus | 20.0 | 26.96 |
| CDY04896 | Canola | nucleus | 19.68 | 26.87 |
| CDY10356 | Canola | nucleus | 19.68 | 26.52 |
| CDX70284 | Canola | nucleus | 19.68 | 26.52 |
| CDY70306 | Canola | nucleus | 24.52 | 26.03 |
| CDX80037 | Canola | nucleus | 21.29 | 25.98 |
| CDX78614 | Canola | nucleus | 25.16 | 25.91 |
| CDY71532 | Canola | nucleus | 19.03 | 25.88 |
| CDX85054 | Canola | nucleus | 25.48 | 25.73 |
| CDY41547 | Canola | nucleus | 20.97 | 25.59 |
| CDX70283 | Canola | nucleus | 18.06 | 25.57 |
| CDX69546 | Canola | nucleus | 25.48 | 25.57 |
| CDY28696 | Canola | nucleus | 21.61 | 25.38 |
| CDX70596 | Canola | nucleus | 24.84 | 25.33 |
| CDY42007 | Canola | nucleus | 17.74 | 25.11 |
| CDY27308 | Canola | nucleus | 18.39 | 24.89 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.1 | GO:A0A078HKI1 | UniProt:A0A078HKI1 | EnsemblPlants:CDY37819 | ProteinID:CDY37819 |
| ProteinID:CDY37819.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSBRNA2T00064762001 | InterPro:HTH_motif | InterPro:Homeobox-like_sf | InterPro:Homeobox_CS | InterPro:Homeobox_dom | InterPro:IPR001356 |
| InterPro:Leu_zip_homeo | PFAM:PF00046 | PFAM:PF02183 | PRINTS:PR00031 | ScanProsite:PS00027 | PFscan:PS50071 |
| PANTHER:PTHR24326 | PANTHER:PTHR24326:SF196 | SMART:SM00389 | SUPFAM:SSF46689 | UniParc:UPI0004EDDD05 | : |
Description
BnaAnng04800DBnaAnng04800D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HKI1]
Coordinates
chrLK032409:-:49554..52052
Molecular Weight (calculated)
34318.9 Da
IEP (calculated)
4.538
GRAVY (calculated)
-0.560
Length
310 amino acids
Sequence
(BLAST)
(BLAST)
001: MKRSRGSSDS LSGFLPIYHS TADKQLSPRP TATGFLYPGS AGDYSQMFDG LEEDGSLEDI GVGHASSTAA AEKKRRLSVV QVKALEKNFE IDNKLEPERK
101: VKLAQELGLQ PRQVAIWFQN RRARWKTKQL ERDYGVLKSN FDSLKRSRDS LQRDNDSLLA EIKELRAKLD VEGTCGNNGN AVTEETGVVK PVETVAFQTV
201: IANNEVLELS QCPPLPGEAP ASELAYEMFS IFPRTESFRE DPADSSDSSA VLNEEYSPTA AAATAVEMST MGCFGQFVKM EEHEDLFSGE EACKLFADNE
301: QWFCSGQWSS
101: VKLAQELGLQ PRQVAIWFQN RRARWKTKQL ERDYGVLKSN FDSLKRSRDS LQRDNDSLLA EIKELRAKLD VEGTCGNNGN AVTEETGVVK PVETVAFQTV
201: IANNEVLELS QCPPLPGEAP ASELAYEMFS IFPRTESFRE DPADSSDSSA VLNEEYSPTA AAATAVEMST MGCFGQFVKM EEHEDLFSGE EACKLFADNE
301: QWFCSGQWSS
001: MKRSRGSSDS LSGFLPIRHS TTDKQISPRP TTTGFLYSGA GDYSQMFDAL EDDGSLEDLG GVGHASSTAA EKKRRLGVEQ VKALEKNFEI DNKLEPERKV
101: KLAQELGLQP RQVAIWFQNR RARWKTKQLE RDYGVLKSNF DALKRNRDSL QRDNDSLLGQ IKELKAKLNV EGVKGIEENG ALKAVEANQS VMANNEVLEL
201: SHRSPSPPPH IPTDAPTSEL AFEMFSIFPR TENFRDDPAD SSDSSAVLNE EYSPNTVEAA GAVAATTVEM STMGCFSQFV KMEEHEDLFS GEEACKLFAD
301: NEQWYCSDQW NS
101: KLAQELGLQP RQVAIWFQNR RARWKTKQLE RDYGVLKSNF DALKRNRDSL QRDNDSLLGQ IKELKAKLNV EGVKGIEENG ALKAVEANQS VMANNEVLEL
201: SHRSPSPPPH IPTDAPTSEL AFEMFSIFPR TENFRDDPAD SSDSSAVLNE EYSPNTVEAA GAVAATTVEM STMGCFSQFV KMEEHEDLFS GEEACKLFAD
301: NEQWYCSDQW NS
Arabidopsis Description
ATHB-5Homeobox-leucine zipper protein ATHB-5 [Source:UniProtKB/Swiss-Prot;Acc:P46667]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.