Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d017920_P001 | Maize | nucleus | 84.96 | 87.27 |
| Os02t0729700-01 | Rice | nucleus | 75.81 | 74.93 |
| TraesCS6A01G290800.1 | Wheat | nucleus | 69.32 | 69.12 |
| TraesCS6B01G321100.1 | Wheat | nucleus | 69.32 | 68.51 |
| HORVU6Hr1G072810.7 | Barley | nucleus | 65.19 | 63.51 |
| TraesCS6D01G272000.1 | Wheat | nucleus | 69.32 | 62.83 |
| GSMUA_Achr8P25940_001 | Banana | nucleus | 48.67 | 57.49 |
| GSMUA_Achr9P18360_001 | Banana | nucleus | 47.2 | 56.54 |
| VIT_14s0066g01440.t01 | Wine grape | nucleus | 42.18 | 52.38 |
| Zm00001d050310_P001 | Maize | nucleus | 41.0 | 51.1 |
| PGSC0003DMT400001322 | Potato | nucleus | 41.89 | 49.82 |
| Solyc02g086930.2.1 | Tomato | nucleus | 41.89 | 49.82 |
| Zm00001d032316_P001 | Maize | nucleus | 39.23 | 49.26 |
| AT3G01470.1 | Thale cress | nucleus | 38.64 | 48.16 |
| Bra039116.1-P | Field mustard | nucleus | 36.58 | 47.69 |
| CDY37519 | Canola | nucleus | 36.58 | 47.69 |
| KRH20316 | Soybean | nucleus | 39.53 | 47.02 |
| CDY49056 | Canola | nucleus | 35.99 | 46.39 |
| KRG93337 | Soybean | nucleus | 36.28 | 46.07 |
| CDY28673 | Canola | nucleus | 36.58 | 45.59 |
| Bra040519.1-P | Field mustard | nucleus | 36.28 | 44.89 |
| Zm00001d005692_P001 | Maize | nucleus | 30.68 | 36.75 |
| Zm00001d020804_P001 | Maize | nucleus | 25.96 | 33.72 |
| Zm00001d017422_P001 | Maize | nucleus | 20.94 | 30.21 |
| Zm00001d005951_P001 | Maize | nucleus | 26.55 | 29.51 |
| Zm00001d002799_P001 | Maize | nucleus | 21.83 | 28.35 |
| Zm00001d030532_P002 | Maize | nucleus | 24.78 | 27.54 |
| Zm00001d021268_P001 | Maize | nucleus | 19.17 | 27.2 |
| Zm00001d027991_P001 | Maize | nucleus | 25.37 | 26.38 |
| Zm00001d025964_P001 | Maize | nucleus | 20.65 | 26.12 |
| Zm00001d027852_P001 | Maize | nucleus | 26.25 | 25.87 |
| Zm00001d006195_P001 | Maize | nucleus | 18.29 | 25.41 |
| Zm00001d048312_P001 | Maize | nucleus | 25.66 | 25.29 |
| Zm00001d014201_P001 | Maize | nucleus | 24.48 | 23.85 |
| Zm00001d033005_P001 | Maize | nucleus | 23.01 | 21.49 |
| Zm00001d048227_P001 | Maize | extracellular, nucleus, plastid | 22.42 | 20.54 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.1 | ProteinID:AQK55062.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | InterPro:HTH_motif | InterPro:Homeobox-like_sf | InterPro:Homeobox_CS | InterPro:Homeobox_dom |
| InterPro:IPR001356 | UniProt:K7U8D5 | InterPro:Leu_zip_homeo | PFAM:PF00046 | PFAM:PF02183 | PRINTS:PR00031 |
| ScanProsite:PS00027 | PFscan:PS50071 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF136 | SMART:SM00389 | SUPFAM:SSF46689 |
| UniParc:UPI0001B3782B | EnsemblPlantsGene:Zm00001d051749 | EnsemblPlants:Zm00001d051749_P001 | EnsemblPlants:Zm00001d051749_T001 | SEG:seg | : |
Description
Homeobox-transcription factor 115Putative homeobox DNA-binding and leucine zipper domain family protein isoform 1%3B Putative homeobox DNA-binding and leucine zipper domain family protein isoform 2
Coordinates
chr4:+:168776069..168778086
Molecular Weight (calculated)
37000.4 Da
IEP (calculated)
4.356
GRAVY (calculated)
-0.723
Length
339 amino acids
Sequence
(BLAST)
(BLAST)
001: MESGRLIFNA PGSGAGQMLF LDCGAGGGPG GGLLHRGGRP MLGLEEGRGV KRPFYTSPDE LLEEEYYDEQ LPEKKRRLTP EQVHLLERSF EEENKLEPER
101: KTELARKLGL QPRQVAVWFQ NRRARWKTKQ LERDFDRLKA SFDALRADHD ALLQDNHRLR SQVVSLTEKL REKEATEGDA NGAAAALPAV GVVRASVADD
201: VEEPEPEPEP EAEAAAFEER QVKSEDRLST GSGGSAVVDA ADALLYNGRI GGAAVDSSVE SYFPGAEVQD QYHGCGTMGP VTHGAGGIQS DDDDGAGSDE
301: GCSYYADEEA AAAFLSEHTH HADGDDEDAG QVSWWWMWN
101: KTELARKLGL QPRQVAVWFQ NRRARWKTKQ LERDFDRLKA SFDALRADHD ALLQDNHRLR SQVVSLTEKL REKEATEGDA NGAAAALPAV GVVRASVADD
201: VEEPEPEPEP EAEAAAFEER QVKSEDRLST GSGGSAVVDA ADALLYNGRI GGAAVDSSVE SYFPGAEVQD QYHGCGTMGP VTHGAGGIQS DDDDGAGSDE
301: GCSYYADEEA AAAFLSEHTH HADGDDEDAG QVSWWWMWN
001: MESNSFFFDP SASHGNSMFF LGNLNPVVQG GGARSMMNME ETSKRRPFFS SPEDLYDDDF YDDQLPEKKR RLTTEQVHLL EKSFETENKL EPERKTQLAK
101: KLGLQPRQVA VWFQNRRARW KTKQLERDYD LLKSTYDQLL SNYDSIVMDN DKLRSEVTSL TEKLQGKQET ANEPPGQVPE PNQLDPVYIN AAAIKTEDRL
201: SSGSVGSAVL DDDAPQLLDS CDSYFPSIVP IQDNSNASDH DNDRSCFADV FVPTTSPSHD HHGESLAFWG WP
101: KLGLQPRQVA VWFQNRRARW KTKQLERDYD LLKSTYDQLL SNYDSIVMDN DKLRSEVTSL TEKLQGKQET ANEPPGQVPE PNQLDPVYIN AAAIKTEDRL
201: SSGSVGSAVL DDDAPQLLDS CDSYFPSIVP IQDNSNASDH DNDRSCFADV FVPTTSPSHD HHGESLAFWG WP
Arabidopsis Description
HAT5HD-ZIP-1 [Source:UniProtKB/TrEMBL;Acc:A0A178VBZ2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.