Factsheet for Zm00001d050310_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
mitochondrion 2
nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG25140	Sorghum	nucleus	94.12	93.09
Zm00001d032316_P001	Maize	nucleus	89.71	90.37
Os08t0416000-01	Rice	nucleus	79.78	62.18
Zm00001d017920_P001	Maize	nucleus	53.31	43.94
GSMUA_Achr8P25940_001	Banana	nucleus	45.22	42.86
GSMUA_Achr9P18360_001	Banana	nucleus	44.49	42.76
Zm00001d051749_P001	Maize	nucleus	51.1	41.0
VIT_14s0066g01440.t01	Wine grape	nucleus	40.07	39.93
Solyc02g086930.2.1	Tomato	nucleus	40.44	38.6
PGSC0003DMT400001322	Potato	nucleus	40.07	38.25
Zm00001d005692_P001	Maize	nucleus	39.71	38.16
AT3G01470.1	Thale cress	nucleus	37.87	37.87
KRG93337	Soybean	nucleus	35.66	36.33
Bra039116.1-P	Field mustard	nucleus	33.82	35.38
CDY37519	Canola	nucleus	33.82	35.38
KRH20316	Soybean	nucleus	36.76	35.09
CDY28673	Canola	nucleus	34.56	34.56
Bra040519.1-P	Field mustard	nucleus	34.19	33.94
CDY49056	Canola	nucleus	32.72	33.84
Zm00001d020804_P001	Maize	nucleus	30.88	32.18
Zm00001d005951_P001	Maize	nucleus	31.99	28.52
Zm00001d017422_P001	Maize	nucleus	22.79	26.38
Zm00001d027852_P001	Maize	nucleus	32.35	25.58
Zm00001d048312_P001	Maize	nucleus	30.51	24.13
Zm00001d030532_P002	Maize	nucleus	26.84	23.93
Zm00001d027991_P001	Maize	nucleus	28.68	23.93
Zm00001d021268_P001	Maize	nucleus	20.22	23.01
Zm00001d002799_P001	Maize	nucleus	22.06	22.99
Zm00001d025964_P001	Maize	nucleus	22.06	22.39
Zm00001d014201_P001	Maize	nucleus	27.57	21.55
Zm00001d006195_P001	Maize	nucleus	19.12	21.31
Zm00001d033005_P001	Maize	nucleus	26.84	20.11
Zm00001d048227_P001	Maize	extracellular, nucleus, plastid	22.79	16.76

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:100282136	MapMan:15.5.3.1	ProteinID:AQK52289.1	UniProt:B6T3Y6	ncoils:Coil
EMBL:EU959701	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:HTH_motif
InterPro:Homeobox-like_sf	InterPro:Homeobox_CS	InterPro:Homeobox_dom	InterPro:IPR001356	InterPro:Leu_zip_homeo	PFAM:PF00046
PFAM:PF02183	PRINTS:PR00031	ScanProsite:PS00027	PFscan:PS50071	PANTHER:PTHR24326	PANTHER:PTHR24326:SF188
SMART:SM00389	SUPFAM:SSF46689	UniParc:UPI000160BACC	EnsemblPlantsGene:Zm00001d050310	EnsemblPlants:Zm00001d050310_P001	EnsemblPlants:Zm00001d050310_T001
SEG:seg	:	:	:	:	:

Description

Homeobox-transcription factor 7Homeodomain leucine zipper protein CPHB-5%3B Putative homeobox DNA-binding and leucine zipper domain family protein

Coordinates

chr4:-:80432810..80437142

Molecular Weight (calculated)

30036.7 Da

IEP (calculated)

4.528

GRAVY (calculated)

-0.679

Length

272 amino acids

Sequence
(BLAST)

001: MDPSAVSFDS GGTRRGGGAQ MLLFGGGGSA NSNGFFRGVP MAVLGMDDAT RVGKRPFFTT HEELLEEEYY DEQAPEKKRR LTAEQVQLLE RSFEEENKLE
101: PERKTELARR LGMAPRQVAV WFQNRRARWK TKQLETDYDR LKAAYDALAA DHQGLLADND NLRAQVISLT EKLQGKETYP SATTAAQEVD QPDEHTAVSG
201: TEELLAQQLK DNLHSSGDCT GHGTLSSEED DGGVVSDEGC SFALPDAMFA AGFTHHGAEE VQLANWTSMF WN

Best Arabidopsis Sequence Match ( AT3G01470.1 )
(BLAST)

001: MESNSFFFDP SASHGNSMFF LGNLNPVVQG GGARSMMNME ETSKRRPFFS SPEDLYDDDF YDDQLPEKKR RLTTEQVHLL EKSFETENKL EPERKTQLAK
101: KLGLQPRQVA VWFQNRRARW KTKQLERDYD LLKSTYDQLL SNYDSIVMDN DKLRSEVTSL TEKLQGKQET ANEPPGQVPE PNQLDPVYIN AAAIKTEDRL
201: SSGSVGSAVL DDDAPQLLDS CDSYFPSIVP IQDNSNASDH DNDRSCFADV FVPTTSPSHD HHGESLAFWG WP

Arabidopsis Description

HAT5HD-ZIP-1 [Source:UniProtKB/TrEMBL;Acc:A0A178VBZ2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.