Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- plastid 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr3P06190_001 | Banana | nucleus | 75.67 | 70.32 |
| GSMUA_Achr5P05300_001 | Banana | nucleus | 53.99 | 68.93 |
| GSMUA_Achr8P25940_001 | Banana | nucleus | 61.6 | 56.45 |
| GSMUA_Achr9P18360_001 | Banana | nucleus | 59.7 | 55.48 |
| VIT_14s0066g01440.t01 | Wine grape | nucleus | 51.71 | 49.82 |
| PGSC0003DMT400001322 | Potato | nucleus | 49.81 | 45.96 |
| AT3G01470.1 | Thale cress | nucleus | 47.53 | 45.96 |
| Solyc02g086930.2.1 | Tomato | nucleus | 49.43 | 45.61 |
| CDY28673 | Canola | nucleus | 46.39 | 44.85 |
| Bra040519.1-P | Field mustard | nucleus | 46.01 | 44.16 |
| Bra039116.1-P | Field mustard | nucleus | 43.35 | 43.85 |
| CDY37519 | Canola | nucleus | 43.35 | 43.85 |
| CDY49056 | Canola | nucleus | 43.73 | 43.73 |
| KRH20316 | Soybean | nucleus | 45.25 | 41.75 |
| KRG93337 | Soybean | nucleus | 42.21 | 41.57 |
| GSMUA_Achr7P12740_001 | Banana | nucleus | 27.76 | 32.02 |
| GSMUA_Achr7P09730_001 | Banana | nucleus | 36.12 | 31.67 |
| GSMUA_Achr10P... | Banana | nucleus | 22.81 | 31.58 |
| GSMUA_Achr6P10310_001 | Banana | nucleus | 23.95 | 30.43 |
| GSMUA_Achr6P36450_001 | Banana | nucleus | 26.62 | 30.17 |
| GSMUA_Achr7P20950_001 | Banana | nucleus | 27.0 | 30.08 |
| GSMUA_Achr7P11760_001 | Banana | nucleus | 28.14 | 29.37 |
| GSMUA_Achr10P... | Banana | nucleus | 27.0 | 28.74 |
| GSMUA_Achr7P11600_001 | Banana | nucleus | 29.66 | 28.26 |
| GSMUA_Achr10P... | Banana | nucleus | 28.14 | 28.14 |
| GSMUA_Achr3P06620_001 | Banana | nucleus | 29.28 | 28.1 |
| GSMUA_Achr1P21620_001 | Banana | nucleus | 29.66 | 27.76 |
| GSMUA_Achr10P... | Banana | nucleus | 29.66 | 27.27 |
| GSMUA_Achr1P16280_001 | Banana | nucleus | 22.43 | 26.82 |
| GSMUA_Achr1P12270_001 | Banana | nucleus | 29.66 | 26.62 |
| GSMUA_Achr10P... | Banana | nucleus | 34.98 | 26.59 |
| GSMUA_Achr4P00550_001 | Banana | nucleus | 28.14 | 26.43 |
| GSMUA_Achr3P21430_001 | Banana | nucleus | 26.62 | 26.32 |
| GSMUA_Achr2P07420_001 | Banana | nucleus | 28.52 | 25.68 |
| GSMUA_Achr2P14750_001 | Banana | extracellular, nucleus | 27.38 | 25.17 |
| GSMUA_Achr6P10660_001 | Banana | nucleus | 26.62 | 24.73 |
| GSMUA_Achr9P14960_001 | Banana | nucleus | 26.24 | 24.56 |
| GSMUA_Achr1P18670_001 | Banana | nucleus | 22.43 | 20.34 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSMUA_Achr9G14570_001 | EnsemblPlants:GSMUA_Achr9P14570_001 | EnsemblPlants:GSMUA_Achr9T14570_001 | InterPro:HTH_motif | InterPro:Homeobox-like_sf | InterPro:Homeobox_CS |
| InterPro:Homeobox_dom | InterPro:IPR001356 | InterPro:Leu_zip_homeo | UniProt:M0U0B5 | PFAM:PF00046 | PFAM:PF02183 |
| PRINTS:PR00031 | ScanProsite:PS00027 | PFscan:PS50071 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF136 | SMART:SM00389 |
| SUPFAM:SSF46689 | UniParc:UPI00029641E3 | SEG:seg | : | : | : |
Description
Putative Homeobox-leucine zipper protein HOX16 [Source:GMGC_GENE;Acc:GSMUA_Achr9G14570_001]
Coordinates
chr9:-:9511818..9514569
Molecular Weight (calculated)
29481.3 Da
IEP (calculated)
5.401
GRAVY (calculated)
-0.706
Length
263 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPARLIFDS SSSHRHHGHR MLLLGSGGVS PVFGGAISAL AEGANKRRPF FTSPDEILEE EYYYDEQLPE KKRRLMPDQV HLLERSFEAE NKLEPERKSE
101: LARKLGLQPR QVAVWFQNRR ARWKTKQLEH DFDRLKSSYN SLLSDHDSLL KENDGLRSQV ISLTEKLQSK AAALMAAAAS VNDPASLGVP KKAEDRLSTG
201: SGGSAVVDAN QLLHSSEESC LPDGYHSMGL VDGRVHSEED DASDEGCNYY SEEDAQLGWW VWN
101: LARKLGLQPR QVAVWFQNRR ARWKTKQLEH DFDRLKSSYN SLLSDHDSLL KENDGLRSQV ISLTEKLQSK AAALMAAAAS VNDPASLGVP KKAEDRLSTG
201: SGGSAVVDAN QLLHSSEESC LPDGYHSMGL VDGRVHSEED DASDEGCNYY SEEDAQLGWW VWN
001: MESNSFFFDP SASHGNSMFF LGNLNPVVQG GGARSMMNME ETSKRRPFFS SPEDLYDDDF YDDQLPEKKR RLTTEQVHLL EKSFETENKL EPERKTQLAK
101: KLGLQPRQVA VWFQNRRARW KTKQLERDYD LLKSTYDQLL SNYDSIVMDN DKLRSEVTSL TEKLQGKQET ANEPPGQVPE PNQLDPVYIN AAAIKTEDRL
201: SSGSVGSAVL DDDAPQLLDS CDSYFPSIVP IQDNSNASDH DNDRSCFADV FVPTTSPSHD HHGESLAFWG WP
101: KLGLQPRQVA VWFQNRRARW KTKQLERDYD LLKSTYDQLL SNYDSIVMDN DKLRSEVTSL TEKLQGKQET ANEPPGQVPE PNQLDPVYIN AAAIKTEDRL
201: SSGSVGSAVL DDDAPQLLDS CDSYFPSIVP IQDNSNASDH DNDRSCFADV FVPTTSPSHD HHGESLAFWG WP
Arabidopsis Description
HAT5HD-ZIP-1 [Source:UniProtKB/TrEMBL;Acc:A0A178VBZ2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.