Factsheet for Os09t0379600-00

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d005692_P001	Maize	nucleus	51.43	38.16
TraesCS5D01G205000.1	Wheat	nucleus	53.81	37.79
TraesCS5B01G197700.1	Wheat	nucleus	53.81	37.79
TraesCS5A01G199300.1	Wheat	nucleus	53.81	37.67
EER98832	Sorghum	nucleus	51.43	34.07
HORVU5Hr1G059410.2	Barley	nucleus	52.38	33.54
KRG93337	Soybean	nucleus	33.81	26.59
CDY49056	Canola	nucleus	32.86	26.24
Bra039116.1-P	Field mustard	nucleus	32.38	26.15
CDY37519	Canola	nucleus	32.38	26.15
GSMUA_Achr8P25940_001	Banana	nucleus	35.71	26.13
GSMUA_Achr9P18360_001	Banana	nucleus	34.29	25.44
AT3G01470.1	Thale cress	nucleus	32.86	25.37
CDY28673	Canola	nucleus	31.9	24.63
KRH20316	Soybean	nucleus	33.33	24.56
Bra040519.1-P	Field mustard	nucleus	31.9	24.45
Solyc02g086930.2.1	Tomato	nucleus	32.38	23.86
VIT_14s0066g01440.t01	Wine grape	nucleus	30.95	23.81
PGSC0003DMT400001322	Potato	nucleus	31.9	23.51
Os02t0729700-01	Rice	nucleus	38.1	23.32
Os08t0416000-01	Rice	nucleus	38.57	23.21
Os08t0481400-01	Rice	nucleus	29.52	23.05
Os09t0470500-01	Rice	nucleus	30.0	22.74
Os03t0188900-01	Rice	nucleus	30.95	20.9
Os02t0649300-01	Rice	nucleus	25.24	20.31
Os10t0377300-01	Rice	nucleus	28.57	19.67
Os09t0528200-01	Rice	nucleus	21.9	18.47
Os10t0404900-01	Rice	nucleus	30.95	18.31
Os04t0541700-02	Rice	nucleus	22.86	17.39
Os03t0170600-01	Rice	cytosol, nucleus	0.0	0.0

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.1	UniProt:A0A0P0XML4	ProteinID:BAT07836.1	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:HTH_motif	InterPro:Homeobox-like_sf	InterPro:Homeobox_CS
InterPro:Homeobox_dom	InterPro:IPR001356	InterPro:Leu_zip_homeo	EnsemblPlantsGene:Os09g0379600	EnsemblPlants:Os09t0379600-00	PFAM:PF00046
PFAM:PF02183	PRINTS:PR00031	ScanProsite:PS00027	PFscan:PS50071	PANTHER:PTHR24326	PANTHER:PTHR24326:SF215
SMART:SM00389	SUPFAM:SSF46689	UniParc:UPI0003938651	SEG:seg	:	:

Description

HOMEOBOX GENE 25Similar to Homeobox-leucine zipper protein HOX25. (Os09t0379600-00)

Coordinates

chr9:-:12782374..12783648

Molecular Weight (calculated)

24735.1 Da

IEP (calculated)

6.543

GRAVY (calculated)

-0.769

Length

210 amino acids

Sequence
(BLAST)

001: MAASSEVSID PDQWFYIYSL ERVAYVCERV GSPVMEEAEL RRRRRKRPFL TTTHDELELQ MEDLVDELYG VDEQGSSSAA ARKRRLTAEQ VRALERSFEE
101: EKRKLEPERK SELARRLGIA PRQVAVWFQN RRARWKTKQL ELDFDRLRAA HDELLAGRTA LAADNESLRS QVSETDHRTE IIYLQNHRFF FITDMWIQNS
201: SDSRISDKLA

Best Arabidopsis Sequence Match ( AT3G01470.1 )
(BLAST)

001: MESNSFFFDP SASHGNSMFF LGNLNPVVQG GGARSMMNME ETSKRRPFFS SPEDLYDDDF YDDQLPEKKR RLTTEQVHLL EKSFETENKL EPERKTQLAK
101: KLGLQPRQVA VWFQNRRARW KTKQLERDYD LLKSTYDQLL SNYDSIVMDN DKLRSEVTSL TEKLQGKQET ANEPPGQVPE PNQLDPVYIN AAAIKTEDRL
201: SSGSVGSAVL DDDAPQLLDS CDSYFPSIVP IQDNSNASDH DNDRSCFADV FVPTTSPSHD HHGESLAFWG WP

Arabidopsis Description

HAT5HD-ZIP-1 [Source:UniProtKB/TrEMBL;Acc:A0A178VBZ2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.