Factsheet for HORVU5Hr1G059410.2

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
mitochondrion 2
nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	nucleus
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G197700.1	Wheat	nucleus	72.26	79.26
TraesCS5D01G205000.1	Wheat	nucleus	71.95	78.93
TraesCS5A01G199300.1	Wheat	nucleus	71.95	78.67
EER98832	Sorghum	nucleus	51.22	53.0
Os09t0379600-00	Rice	nucleus	33.54	52.38
Zm00001d005692_P001	Maize	nucleus	45.12	52.3
GSMUA_Achr8P25940_001	Banana	nucleus	32.32	36.93
GSMUA_Achr9P18360_001	Banana	nucleus	30.79	35.69
AT3G01470.1	Thale cress	nucleus	28.05	33.82
VIT_14s0066g01440.t01	Wine grape	nucleus	28.05	33.7
Bra039116.1-P	Field mustard	nucleus	25.61	32.31
CDY37519	Canola	nucleus	25.61	32.31
HORVU5Hr1G070260.1	Barley	nucleus	26.22	32.21
CDY28673	Canola	nucleus	26.52	31.99
CDY49056	Canola	nucleus	25.61	31.94
Bra040519.1-P	Field mustard	nucleus	26.22	31.39
Solyc02g086930.2.1	Tomato	nucleus	26.22	30.18
KRH20316	Soybean	nucleus	25.91	29.82
HORVU6Hr1G072810.7	Barley	nucleus	31.4	29.6
KRG93337	Soybean	nucleus	24.09	29.59
PGSC0003DMT400001322	Potato	nucleus	25.61	29.47
HORVU2Hr1G092710.2	Barley	nucleus	20.12	24.81
HORVU4Hr1G075170.1	Barley	nucleus	19.21	24.61
HORVU5Hr1G081090.1	Barley	nucleus	18.6	24.4
HORVU4Hr1G078410.5	Barley	nucleus, plastid	23.17	23.1
HORVU6Hr1G061390.1	Barley	nucleus	20.12	20.75
HORVU4Hr1G075180.3	Barley	nucleus, plastid	23.78	19.8

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.1	UniProt:A0A287RE18	ncoils:Coil	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	EnsemblPlantsGene:HORVU5Hr1G059410	EnsemblPlants:HORVU5Hr1G059410.2	InterPro:HTH_motif	InterPro:Homeobox-like_sf
InterPro:Homeobox_CS	InterPro:Homeobox_dom	InterPro:IPR001356	InterPro:Leu_zip_homeo	PFAM:PF00046	PFAM:PF02183
PRINTS:PR00031	ScanProsite:PS00027	PFscan:PS50071	PANTHER:PTHR24326	PANTHER:PTHR24326:SF215	SMART:SM00389
SUPFAM:SSF46689	UniParc:UPI000B46B3FC	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrchr5H:-:464223519..464227672

Molecular Weight (calculated)

35490.7 Da

IEP (calculated)

7.502

GRAVY (calculated)

-0.566

Length

328 amino acids

Sequence
(BLAST)

001: MDSGRLIFGS AAPSRAAGAG GGQMMLFGGS GSLLGGSPVV AGVEDGRRKR PFLTSPEEEL QLDDEMYGYY GLDENAPERK RRLTAEQVRA LERSFEEEKR
101: KLEPERKSEL ARRLGIAPRQ VAVWFQNRRA RWKAKQLEQD FDALRAAHAE LLAGRDALLA DNHHLRSQVT SLTEKLQAKE SWPVSEQEKP TAAVVHPKEG
201: YSAGATGDGT VGVLASFSGG AKDSPESHSY LADARSPPSS SDDDCAGAAS GELSGCAFFL PEYTMLDAAA VEPPPKRRKR SVSTGHGSGA DRSSMRTSGK
301: MAYLYPIFCC EPAPLFNPIQ KCNIRSIS

Best Arabidopsis Sequence Match ( AT3G01470.1 )
(BLAST)

001: MESNSFFFDP SASHGNSMFF LGNLNPVVQG GGARSMMNME ETSKRRPFFS SPEDLYDDDF YDDQLPEKKR RLTTEQVHLL EKSFETENKL EPERKTQLAK
101: KLGLQPRQVA VWFQNRRARW KTKQLERDYD LLKSTYDQLL SNYDSIVMDN DKLRSEVTSL TEKLQGKQET ANEPPGQVPE PNQLDPVYIN AAAIKTEDRL
201: SSGSVGSAVL DDDAPQLLDS CDSYFPSIVP IQDNSNASDH DNDRSCFADV FVPTTSPSHD HHGESLAFWG WP

Arabidopsis Description

HAT5HD-ZIP-1 [Source:UniProtKB/TrEMBL;Acc:A0A178VBZ2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.