Factsheet for Os05t0500600-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G319500.1	Wheat	cytosol	73.65	75.42
TraesCS1A01G319700.1	Wheat	cytosol	73.41	75.18
HORVU1Hr1G066390.1	Barley	cytosol	72.94	74.7
TraesCS1B01G332000.1	Wheat	cytosol	72.94	74.7
EES18455	Sorghum	cytosol	73.41	73.58
Zm00001d038609_P001	Maize	cytosol	71.06	70.89
KXG33889	Sorghum	cytosol	50.82	67.29
GSMUA_Achr6P24300_001	Banana	cytosol, peroxisome, plastid	53.88	54.27
VIT_12s0059g02770.t01	Wine grape	cytosol	51.76	49.44
Solyc07g052960.1.1	Tomato	cytosol	49.18	48.72
PGSC0003DMT400067360	Potato	cytosol	48.71	48.48
KRH26849	Soybean	cytosol	49.65	45.87
KRH22503	Soybean	cytosol	49.18	44.75
Os07t0589200-00	Rice	cytosol	42.82	38.48
Os03t0433200-00	Rice	cytosol, mitochondrion, nucleus, plastid	33.18	23.38
Os07t0586900-01	Rice	plastid	32.71	23.09
Os03t0408600-01	Rice	nucleus	28.0	22.75

Protein Annotations

MapMan:15.5.12	EntrezGene:4339232	ProteinID:AAT93866.1	ProteinID:AAU90224.1	EMBL:AK070489	ProteinID:BAF17879.1
ProteinID:BAS94759.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565
InterPro:IPR005202	EnsemblPlantsGene:Os05g0500600	EnsemblPlants:Os05t0500600-01	PFAM:PF03514	PFscan:PS50985	PANTHER:PTHR31636
PANTHER:PTHR31636:SF5	UniProt:Q6AUW2	InterPro:TF_GRAS	UniParc:UPI0000403628	RefSeq:XP_015638716.1	SEG:seg

Description

GRAS transcription factor domain containing protein. (Os05t0500600-01)

Coordinates

chr5:+:24631172..24632713

Molecular Weight (calculated)

45433.3 Da

IEP (calculated)

6.137

GRAVY (calculated)

0.017

Length

425 amino acids

Sequence
(BLAST)

001: MDMEHELRGG GVGAAAHGHG SICFSGGPVL VDGRRIQQLL LHCAAALESN DVTLAQQAMW VLNNIASSQG DPSQRLTSWL LRALVARACR LCAAAPAGAA
101: VEFLERGRAP PWGRAMSVTE LADYVDLTPW HRFGFTASNA AILRAVAGAS AVHVVDLSVT HCMQWPTLID VLSKRPGGAP AIRITVPSVR PAVPPLLAVS
201: SSELGARLAI FAKSKGVQLE FNVVESATTT SPKKTSTTLC QELASVLSDP PSLGLRDGEA VVVNCQSWLR HVAPDTRDLF LDTVRALNPC LLTVTDEDAD
301: LGSPSLASRM AGCFDFHWIL LDALDMSAPK DSPRRLEQEA AVGRKIESVI GEEDGAERSE PGARLAERMS RKGFAGVVFD EEAAAEVRRL LSEHATGWGV
401: KREDDMLVLT WKGHAAVFTG AWTPN

Best Arabidopsis Sequence Match ( AT3G49950.1 )
(BLAST)

001: MTKTRILNPT RFPSPKPLRG CGDANFMEQL LLHCATAIDS NDAALTHQIL WVLNNIAPPD GDSTQRLTSA FLRALLSRAV SKTPTLSSTI SFLPQADELH
101: RFSVVELAAF VDLTPWHRFG FIAANAAILT AVEGYSTVHI VDLSLTHCMQ IPTLIDAMAS RLNKPPPLLK LTVVSSSDHF PPFINISYEE LGSKLVNFAT
201: TRNITMEFTI VPSTYSDGFS SLLQQLRIYP SSFNEALVVN CHMMLRYIPE EPLTSSSSSL RTVFLKQLRS LNPRIVTLIE EDVDLTSENL VNRLKSAFNY
301: FWIPFDTTDT FMSEQRRWYE AEISWKIENV VAKEGAERVE RTETKRRWIE RMREAEFGGV RVKEDAVADV KAMLEEHAVG WGMKKEDDDE SLVLTWKGHS
401: VVFATVWVPI

Arabidopsis Description

SCL32Scarecrow-like protein 32 [Source:UniProtKB/Swiss-Prot;Acc:Q9SN22]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.