Factsheet for Zm00001d038609_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES18455	Sorghum	cytosol	87.32	87.74
TraesCS1D01G319500.1	Wheat	cytosol	73.0	74.94
TraesCS1A01G319700.1	Wheat	cytosol	72.3	74.22
TraesCS1B01G332000.1	Wheat	cytosol	72.07	73.98
HORVU1Hr1G066390.1	Barley	cytosol	71.6	73.49
KXG33889	Sorghum	cytosol	54.23	71.96
Os05t0500600-01	Rice	cytosol	70.89	71.06
GSMUA_Achr6P24300_001	Banana	cytosol, peroxisome, plastid	55.87	56.4
VIT_12s0059g02770.t01	Wine grape	cytosol	52.11	49.89
PGSC0003DMT400067360	Potato	cytosol	49.53	49.41
Solyc07g052960.1.1	Tomato	cytosol	48.59	48.25
KRH26849	Soybean	cytosol	49.06	45.43
KRH22503	Soybean	cytosol	49.06	44.75
Zm00001d021998_P001	Maize	plastid	43.43	40.57
Zm00001d006744_P001	Maize	plastid	43.19	40.35
Zm00001d006721_P001	Maize	nucleus	35.45	25.77
Zm00001d021973_P001	Maize	nucleus	35.45	25.51
Zm00001d029607_P001	Maize	plastid	34.51	23.33
Zm00001d029474_P001	Maize	cytosol	25.12	20.34
Zm00001d047266_P001	Maize	nucleus	24.18	19.25
Zm00001d022116_P001	Maize	nucleus	23.24	18.17
Zm00001d048624_P001	Maize	nucleus	8.69	16.82

Protein Annotations

EnsemblPlants:Zm00001d038609_P001	EnsemblPlants:Zm00001d038609_T001	EnsemblPlantsGene:Zm00001d038609	EntrezGene:103630560	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR005202
InterPro:TF_GRAS	PANTHER:PTHR31636	PANTHER:PTHR31636:SF5	PFAM:PF03514	PFscan:PS50985	ProteinID:AQK87025.1
SEG:seg	UniParc:UPI0001E24D16	UniProt:A0A1D6M7J8	MapMan:15.5.12	:	:

Description

GRAS-transcription factor 62Scarecrow-like protein 32

Coordinates

chr6:+:160900038..160901318

Molecular Weight (calculated)

45517.2 Da

IEP (calculated)

6.509

GRAVY (calculated)

-0.100

Length

426 amino acids

Sequence
(BLAST)

001: MEQELRTGGR GGGNLRAHSS ACLSGALIDG PRIQQLLLHC AAALESNDVT LAQQAMWVLN NIASSQGDPS QRLTSWLLRA LVARACRLCA PPGSTTQSAA
101: AAAAARTPAP RERAMSVTEL AEYVDLMPWH RFGFTASNGA ILRAVVGSAA VHVVDLSVTR CMQWPTLIDM LSKRPGGPPE LRITVPSARP AVPPQLGVSD
201: AEIGLRLANF AKSKGVQLHF SVVEGVTSPP PEKQAAALCQ DLASVLSDRQ ALGLRDGEAL VVNCQSWIRH VAPGSRDAFL GAVRALNPCL VTVTDEDADL
301: DSPSLATRIA GCFDFHWILF DALDTSAPRD SPRRAEHEAA VGRKIEGVVG ADDADGAERS ESGARLAERM RRNGFVSVAF DEEAAGEVRR LLSEHATGWG
401: MKREEDMLVL TWKGHGAVYT SAWMPN

Best Arabidopsis Sequence Match ( AT3G49950.1 )
(BLAST)

001: MTKTRILNPT RFPSPKPLRG CGDANFMEQL LLHCATAIDS NDAALTHQIL WVLNNIAPPD GDSTQRLTSA FLRALLSRAV SKTPTLSSTI SFLPQADELH
101: RFSVVELAAF VDLTPWHRFG FIAANAAILT AVEGYSTVHI VDLSLTHCMQ IPTLIDAMAS RLNKPPPLLK LTVVSSSDHF PPFINISYEE LGSKLVNFAT
201: TRNITMEFTI VPSTYSDGFS SLLQQLRIYP SSFNEALVVN CHMMLRYIPE EPLTSSSSSL RTVFLKQLRS LNPRIVTLIE EDVDLTSENL VNRLKSAFNY
301: FWIPFDTTDT FMSEQRRWYE AEISWKIENV VAKEGAERVE RTETKRRWIE RMREAEFGGV RVKEDAVADV KAMLEEHAVG WGMKKEDDDE SLVLTWKGHS
401: VVFATVWVPI

Arabidopsis Description

SCL32Scarecrow-like protein 32 [Source:UniProtKB/Swiss-Prot;Acc:Q9SN22]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.