Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 1
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER97471 | Sorghum | cytosol | 89.69 | 89.89 |
| Zm00001d021998_P001 | Maize | plastid | 86.18 | 86.18 |
| TraesCS2D01G193300.1 | Wheat | plastid | 83.55 | 83.01 |
| TraesCS2A01G194600.1 | Wheat | plastid | 83.11 | 82.57 |
| HORVU2Hr1G035120.1 | Barley | cytosol | 82.68 | 82.31 |
| Os07t0589200-00 | Rice | cytosol | 85.31 | 82.24 |
| TraesCS2B01G212300.1 | Wheat | endoplasmic reticulum, plasma membrane | 80.48 | 72.67 |
| GSMUA_Achr10P... | Banana | plastid | 65.13 | 65.27 |
| GSMUA_Achr6P16880_001 | Banana | cytosol, plasma membrane, plastid | 63.82 | 63.68 |
| GSMUA_Achr6P07790_001 | Banana | plastid | 62.5 | 62.36 |
| Solyc02g092570.1.1 | Tomato | plastid | 55.92 | 58.22 |
| VIT_07s0129g00340.t01 | Wine grape | plastid | 57.68 | 57.8 |
| PGSC0003DMT400064187 | Potato | plastid | 55.26 | 57.53 |
| AT3G49950.1 | Thale cress | mitochondrion | 50.0 | 55.61 |
| CDY12844 | Canola | cytosol, mitochondrion, plastid | 51.1 | 53.81 |
| KRH04459 | Soybean | plastid | 56.36 | 53.32 |
| CDY58198 | Canola | mitochondrion | 48.68 | 53.11 |
| CDY30617 | Canola | mitochondrion | 48.68 | 53.11 |
| AT5G67411.1 | Thale cress | cytosol, mitochondrion, nucleus | 23.46 | 52.97 |
| Bra036041.1-P | Field mustard | mitochondrion | 48.46 | 52.87 |
| KRH58050 | Soybean | cytosol | 56.36 | 48.95 |
| Zm00001d038609_P001 | Maize | cytosol | 40.35 | 43.19 |
| Zm00001d029474_P001 | Maize | cytosol | 27.63 | 23.95 |
| Zm00001d047266_P001 | Maize | nucleus | 27.85 | 23.74 |
| Zm00001d006721_P001 | Maize | nucleus | 30.26 | 23.55 |
| Zm00001d021973_P001 | Maize | nucleus | 30.48 | 23.48 |
| Zm00001d029607_P001 | Maize | plastid | 29.39 | 21.27 |
| Zm00001d022116_P001 | Maize | nucleus | 23.9 | 20.0 |
| Zm00001d048624_P001 | Maize | nucleus | 8.55 | 17.73 |
Protein Annotations
| EnsemblPlants:Zm00001d006744_P001 | EnsemblPlants:Zm00001d006744_T001 | EnsemblPlantsGene:Zm00001d006744 | EntrezGene:103647799 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR005202 |
| InterPro:TF_GRAS | PANTHER:PTHR31636 | PANTHER:PTHR31636:SF51 | PFAM:PF03514 | PFscan:PS50985 | ProteinID:ONM24904.1 |
| SEG:seg | UniParc:UPI000221EA6F | UniProt:A0A1D6F055 | MapMan:15.5.12 | : | : |
Description
GRAS-transcription factor 73Scarecrow-like protein 32
Coordinates
chr2:+:215722019..215723389
Molecular Weight (calculated)
49136.8 Da
IEP (calculated)
5.262
GRAVY (calculated)
0.057
Length
456 amino acids
Sequence
(BLAST)
(BLAST)
001: MMQFTHTAPP PPPLHPNGHA AGVLGLGLFL DVGAPTAARP CPGSFPTPAS KISLGNDLNS TSCMEQLLVH CANAIEANDA TLTQQILWVL NNIAPPDGDS
101: NQRLTAAFLC ALVARASRTG ACKAVTAAVA AESAALHVHR FTAVELAGFV DLTPWHRFGY TAANAAILEA AEGFPVVHVV ELGTTHCMQI PTLIDMLATR
201: AEGPPILRLT VADVAPSAPP PALDMSYEEL GAKLVNFARS RNVSMDFRVV PTAPADAFTS LVNQLRVQQL VLDGSEALVV NCHMLLHTVP DETAGSVGLT
301: QPVSLRTMLL KSFRTLDPNL VVVVEEDADF TAGDVVGRLR AAFNFLWIPY DAVDTFLPKG SEQRRWYEAE IGWKVENVLA QEGVERVERQ EDRGRWGQRM
401: RSAGFRALAF GEEAAGEVKA MLNEHAAGWG MKREDDDLVL TWKGHNVVFA SAWAPS
101: NQRLTAAFLC ALVARASRTG ACKAVTAAVA AESAALHVHR FTAVELAGFV DLTPWHRFGY TAANAAILEA AEGFPVVHVV ELGTTHCMQI PTLIDMLATR
201: AEGPPILRLT VADVAPSAPP PALDMSYEEL GAKLVNFARS RNVSMDFRVV PTAPADAFTS LVNQLRVQQL VLDGSEALVV NCHMLLHTVP DETAGSVGLT
301: QPVSLRTMLL KSFRTLDPNL VVVVEEDADF TAGDVVGRLR AAFNFLWIPY DAVDTFLPKG SEQRRWYEAE IGWKVENVLA QEGVERVERQ EDRGRWGQRM
401: RSAGFRALAF GEEAAGEVKA MLNEHAAGWG MKREDDDLVL TWKGHNVVFA SAWAPS
001: MTKTRILNPT RFPSPKPLRG CGDANFMEQL LLHCATAIDS NDAALTHQIL WVLNNIAPPD GDSTQRLTSA FLRALLSRAV SKTPTLSSTI SFLPQADELH
101: RFSVVELAAF VDLTPWHRFG FIAANAAILT AVEGYSTVHI VDLSLTHCMQ IPTLIDAMAS RLNKPPPLLK LTVVSSSDHF PPFINISYEE LGSKLVNFAT
201: TRNITMEFTI VPSTYSDGFS SLLQQLRIYP SSFNEALVVN CHMMLRYIPE EPLTSSSSSL RTVFLKQLRS LNPRIVTLIE EDVDLTSENL VNRLKSAFNY
301: FWIPFDTTDT FMSEQRRWYE AEISWKIENV VAKEGAERVE RTETKRRWIE RMREAEFGGV RVKEDAVADV KAMLEEHAVG WGMKKEDDDE SLVLTWKGHS
401: VVFATVWVPI
101: RFSVVELAAF VDLTPWHRFG FIAANAAILT AVEGYSTVHI VDLSLTHCMQ IPTLIDAMAS RLNKPPPLLK LTVVSSSDHF PPFINISYEE LGSKLVNFAT
201: TRNITMEFTI VPSTYSDGFS SLLQQLRIYP SSFNEALVVN CHMMLRYIPE EPLTSSSSSL RTVFLKQLRS LNPRIVTLIE EDVDLTSENL VNRLKSAFNY
301: FWIPFDTTDT FMSEQRRWYE AEISWKIENV VAKEGAERVE RTETKRRWIE RMREAEFGGV RVKEDAVADV KAMLEEHAVG WGMKKEDDDE SLVLTWKGHS
401: VVFATVWVPI
Arabidopsis Description
SCL32Scarecrow-like protein 32 [Source:UniProtKB/Swiss-Prot;Acc:Q9SN22]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.