Factsheet for TraesCS2A01G194600.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
cytosol 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G193300.1	Wheat	plastid	99.13	99.13
HORVU2Hr1G035120.1	Barley	cytosol	93.46	93.67
TraesCS2B01G212300.1	Wheat	endoplasmic reticulum, plasma membrane	94.12	85.54
EER97471	Sorghum	cytosol	84.75	85.49
Zm00001d021998_P001	Maize	plastid	83.22	83.77
Zm00001d006744_P001	Maize	plastid	82.57	83.11
Os07t0589200-00	Rice	cytosol	84.1	81.61
GSMUA_Achr10P...	Banana	plastid	65.36	65.93
GSMUA_Achr6P16880_001	Banana	cytosol, plasma membrane, plastid	64.27	64.55
GSMUA_Achr6P07790_001	Banana	plastid	62.09	62.36
VIT_07s0129g00340.t01	Wine grape	plastid	56.86	57.36
Solyc02g092570.1.1	Tomato	plastid	54.68	57.31
PGSC0003DMT400064187	Potato	plastid	54.25	56.85
AT3G49950.1	Thale cress	mitochondrion	49.24	55.12
CDY12844	Canola	cytosol, mitochondrion, plastid	51.42	54.5
AT5G67411.1	Thale cress	cytosol, mitochondrion, nucleus	22.88	51.98
KRH04459	Soybean	plastid	54.47	51.87
CDY30617	Canola	mitochondrion	47.06	51.67
CDY58198	Canola	mitochondrion	46.84	51.44
Bra036041.1-P	Field mustard	mitochondrion	46.84	51.44
KRH58050	Soybean	cytosol	55.34	48.38
TraesCS1A01G319700.1	Wheat	cytosol	40.52	44.82
TraesCS2A01G460200.1	Wheat	nucleus	26.14	23.26
TraesCS2A01G192600.1	Wheat	plastid	28.32	21.89

Protein Annotations

EnsemblPlants:TraesCS2A01G194600.1	EnsemblPlantsGene:TraesCS2A01G194600	InterPro:IPR005202	InterPro:TF_GRAS	PANTHER:PTHR31636	PANTHER:PTHR31636:SF51
PFAM:PF03514	PFscan:PS50985	SEG:seg	MapMan:15.5.12	:	:

Description

No Description!

Coordinates

chr2A:+:163669553..163670932

Molecular Weight (calculated)

49690.5 Da

IEP (calculated)

5.547

GRAVY (calculated)

0.069

Length

459 amino acids

Sequence
(BLAST)

001: MMQFTHAAVT APPLYPNGHH GLGLGLFLDV GAPRARPWPA AGSLFPTLPP SSKISLGNLN SAGCMEQLLV HCANAIEAND ATLTQQILWV LNNIAPADGD
101: SNQRLTAAFL CALVARASRT GACKAVTAAV AAAVESAALH LHRFTAVELA SFVDLTPWHR FGYMAANHAI LEAVEGFSVV HVVDLSTTHC MQMPTLIDML
201: ASRAEGPPIL RLTVADVGCS GPPPALDMSY DELGAKLVNF ARSRNVTMDF RMVPTSPADA LTSLVDQLRV QQLVSDGTEA LIVNCHMLLH TVPDETAGSV
301: SLTQSVSLRT MLLKSIRTLD PTLVVVAEED ADFTAGDVVG RLRAAFNFLW IPYDAVDTFL PKGSEQRRWY EAEVGWKVEN VLAQEGVDRV ERQEDRARWG
401: QRMRGAGFRA VAFGEEAAGE IRTMLNEHAA GWGMKREDDD LMLTWKGHNV VFASAWAPS

Best Arabidopsis Sequence Match ( AT3G49950.1 )
(BLAST)

001: MTKTRILNPT RFPSPKPLRG CGDANFMEQL LLHCATAIDS NDAALTHQIL WVLNNIAPPD GDSTQRLTSA FLRALLSRAV SKTPTLSSTI SFLPQADELH
101: RFSVVELAAF VDLTPWHRFG FIAANAAILT AVEGYSTVHI VDLSLTHCMQ IPTLIDAMAS RLNKPPPLLK LTVVSSSDHF PPFINISYEE LGSKLVNFAT
201: TRNITMEFTI VPSTYSDGFS SLLQQLRIYP SSFNEALVVN CHMMLRYIPE EPLTSSSSSL RTVFLKQLRS LNPRIVTLIE EDVDLTSENL VNRLKSAFNY
301: FWIPFDTTDT FMSEQRRWYE AEISWKIENV VAKEGAERVE RTETKRRWIE RMREAEFGGV RVKEDAVADV KAMLEEHAVG WGMKKEDDDE SLVLTWKGHS
401: VVFATVWVPI

Arabidopsis Description

SCL32Scarecrow-like protein 32 [Source:UniProtKB/Swiss-Prot;Acc:Q9SN22]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.