Factsheet for Os07t0589200-00

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
cytosol 2
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER97471	Sorghum	cytosol	85.62	89.01
Zm00001d021998_P001	Maize	plastid	82.88	85.96
Zm00001d006744_P001	Maize	plastid	82.24	85.31
TraesCS2D01G193300.1	Wheat	plastid	81.61	84.1
TraesCS2A01G194600.1	Wheat	plastid	81.61	84.1
HORVU2Hr1G035120.1	Barley	cytosol	80.97	83.62
TraesCS2B01G212300.1	Wheat	endoplasmic reticulum, plasma membrane	79.7	74.65
GSMUA_Achr10P...	Banana	plastid	64.06	66.59
GSMUA_Achr6P16880_001	Banana	cytosol, plasma membrane, plastid	64.06	66.3
GSMUA_Achr6P07790_001	Banana	plastid	62.37	64.55
Solyc02g092570.1.1	Tomato	plastid	55.39	59.82
PGSC0003DMT400064187	Potato	plastid	54.55	58.9
VIT_07s0129g00340.t01	Wine grape	plastid	56.24	58.46
AT3G49950.1	Thale cress	mitochondrion	48.2	55.61
CDY12844	Canola	cytosol, mitochondrion, plastid	49.68	54.27
AT5G67411.1	Thale cress	cytosol, mitochondrion, nucleus	23.04	53.96
KRH04459	Soybean	plastid	54.33	53.32
CDY30617	Canola	mitochondrion	46.51	52.63
Bra036041.1-P	Field mustard	mitochondrion	46.3	52.39
CDY58198	Canola	mitochondrion	46.09	52.15
KRH58050	Soybean	cytosol	54.97	49.52
Os05t0500600-01	Rice	cytosol	38.48	42.82
Os03t0433200-00	Rice	cytosol, mitochondrion, nucleus, plastid	29.81	23.38
Os07t0586900-01	Rice	plastid	29.6	23.26
Os03t0408600-01	Rice	nucleus	25.16	22.75

Protein Annotations

MapMan:15.5.12	EntrezGene:4343769	UniProt:B9FY68	ProteinID:BAT02426.1	ProteinID:EEE67505.1	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR005202	EnsemblPlantsGene:Os07g0589200
EnsemblPlants:Os07t0589200-00	PFAM:PF03514	PFscan:PS50985	PANTHER:PTHR31636	PANTHER:PTHR31636:SF51	InterPro:TF_GRAS
UniParc:UPI00019348BB	RefSeq:XP_015645421.1	SEG:seg	:	:	:

Description

GRAS transcription factor domain containing protein. (Os07t0589200-00)

Coordinates

chr7:+:24014183..24016352

Molecular Weight (calculated)

50599.2 Da

IEP (calculated)

5.259

GRAVY (calculated)

0.022

Length

473 amino acids

Sequence
(BLAST)

001: MMQFTHTAPP PPPLHPNGHG LGLGLYLDVG ATRGGGGARP WSSSSSTTTL GGSGYFPSSA AASKISLGNL NSTGCMEQLL VHCANAIEAN DATLTQQILW
101: VLNNIAPADG DSNQRLTAAF LCALVSRASR TGACKAVTAA VADAVESAAL HVHRFTAVEL ASFIDLTPWH RFGYTAANAA IVEAVEGFPV VHIVDLSTTH
201: CMQIPTLIDM LAGRAEGPPI LRLTVADVAP SAPPPALDMP YEELGAKLVN FARSRNMSMD FRVVPTSPAD ALTSLVDQLR VQQLVSDGGE ALVVNCHMLL
301: HTVPDETAGS VSLTTAQPPV SLRTMLLKSL RALDPTLVVV VDEDADFTAG DVVGRLRAAF NFLWIPYDAV DTFLPKGSEQ RRWYEAEVGW KVENVLAQEG
401: VERVERQEDR TRWGQRMRAA GFRAAAFGEE AAGEVKAMLN DHAAGWGMKR EDDDLVLTWK GHNVVFASAW APS

Best Arabidopsis Sequence Match ( AT3G49950.1 )
(BLAST)

001: MTKTRILNPT RFPSPKPLRG CGDANFMEQL LLHCATAIDS NDAALTHQIL WVLNNIAPPD GDSTQRLTSA FLRALLSRAV SKTPTLSSTI SFLPQADELH
101: RFSVVELAAF VDLTPWHRFG FIAANAAILT AVEGYSTVHI VDLSLTHCMQ IPTLIDAMAS RLNKPPPLLK LTVVSSSDHF PPFINISYEE LGSKLVNFAT
201: TRNITMEFTI VPSTYSDGFS SLLQQLRIYP SSFNEALVVN CHMMLRYIPE EPLTSSSSSL RTVFLKQLRS LNPRIVTLIE EDVDLTSENL VNRLKSAFNY
301: FWIPFDTTDT FMSEQRRWYE AEISWKIENV VAKEGAERVE RTETKRRWIE RMREAEFGGV RVKEDAVADV KAMLEEHAVG WGMKKEDDDE SLVLTWKGHS
401: VVFATVWVPI

Arabidopsis Description

SCL32Scarecrow-like protein 32 [Source:UniProtKB/Swiss-Prot;Acc:Q9SN22]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.