CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH58050	Soybean	cytosol	82.57	75.81
Solyc02g092570.1.1	Tomato	plastid	61.0	67.12
VIT_07s0129g00340.t01	Wine grape	plastid	63.28	67.03
PGSC0003DMT400064187	Potato	plastid	60.79	66.89
AT5G67411.1	Thale cress	cytosol, mitochondrion, nucleus	26.14	62.38
AT3G49950.1	Thale cress	mitochondrion	50.0	58.78
GSMUA_Achr10P...	Banana	plastid	55.39	58.68
CDY12844	Canola	cytosol, mitochondrion, plastid	51.66	57.51
EER97471	Sorghum	cytosol	53.94	57.14
GSMUA_Achr6P07790_001	Banana	plastid	54.15	57.11
Zm00001d006744_P001	Maize	plastid	53.32	56.36
Zm00001d021998_P001	Maize	plastid	52.9	55.92
GSMUA_Achr6P16880_001	Banana	cytosol, plasma membrane, plastid	52.28	55.14
TraesCS2D01G193300.1	Wheat	plastid	52.28	54.9
HORVU2Hr1G035120.1	Barley	cytosol	52.07	54.8
TraesCS2A01G194600.1	Wheat	plastid	51.87	54.47
Os07t0589200-00	Rice	cytosol	53.32	54.33
Bra036041.1-P	Field mustard	mitochondrion	47.1	54.31
CDY58198	Canola	mitochondrion	47.1	54.31
CDY30617	Canola	mitochondrion	46.89	54.07
TraesCS2B01G212300.1	Wheat	endoplasmic reticulum, plasma membrane	52.49	50.1
KRH26849	Soybean	cytosol	38.17	40.0
KRH22503	Soybean	cytosol	38.17	39.4
KRH10104	Soybean	cytosol	26.97	29.75
KRH23228	Soybean	cytosol	26.56	28.89
KRH77129	Soybean	plastid	25.93	26.26
KRH28353	Soybean	plastid	25.73	25.73
KRH58109	Soybean	cytosol, plastid	24.07	23.25
KRH04424	Soybean	plastid	23.24	22.27
KRH47610	Soybean	cytosol	24.27	21.59
KRH06192	Soybean	nucleus	23.65	20.99

Protein Annotations

EntrezGene:100808898	MapMan:15.5.12	EMBL:ACUP02010417	EnsemblPlantsGene:GLYMA_17G162800	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR005202	UniProt:K7MLZ6	EnsemblPlants:KRH04459
ProteinID:KRH04459	ProteinID:KRH04459.1	PFAM:PF03514	PFscan:PS50985	PANTHER:PTHR31636	PANTHER:PTHR31636:SF51
InterPro:TF_GRAS	UniParc:UPI0001E24C22	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr17:+:14500483..14502989

Molecular Weight (calculated)

53803.1 Da

IEP (calculated)

6.097

GRAVY (calculated)

-0.165

Length

482 amino acids

Sequence
(BLAST)

001: MTQFTPPLPP LHHQITSLLP NPNMMNKNQI PRPRPWPASG FPTTSKALSN LGNANCMEQL LVHCANAIET NDVTLAQQIL WVLNNIAPHD GDSNQRLASG
101: FLRALTARAA KTGTCKMLVS AGTNLSIDTH RFNIIELANF VDLTPWHRFG FTAANAAVLE ATEGFSVVHI VDLSLTHCMQ IPTLVDAIAS RQHHDAPPPI
201: IKLTVADACC RDHIPPMLDL SYEELGAKLV SFARSRNVIM EFRVVSSSYQ DGFASLIEHL RVQQEQQQQQ QQQHFVYAAE PSTPSEALVI NCHMMLHYIP
301: DETLSDTTDL TSYVYDSSSS AAVSVTPTSS LRSLFLKSLR GLDPTVVILV DEDADLTSNN LVCRLRSAFN FLWIPYDTVD TFLPRGSKQR QWYEADICWK
401: IENVIAHEGL QRVERVEPKN KWEERMKNAS FQGVGFSEDS VAEVKAMLDE HAAGWGLKKE DEHIVLTWKG HNVVFASAWL PA

Best Arabidopsis Sequence Match ( AT3G49950.1 )
(BLAST)

001: MTKTRILNPT RFPSPKPLRG CGDANFMEQL LLHCATAIDS NDAALTHQIL WVLNNIAPPD GDSTQRLTSA FLRALLSRAV SKTPTLSSTI SFLPQADELH
101: RFSVVELAAF VDLTPWHRFG FIAANAAILT AVEGYSTVHI VDLSLTHCMQ IPTLIDAMAS RLNKPPPLLK LTVVSSSDHF PPFINISYEE LGSKLVNFAT
201: TRNITMEFTI VPSTYSDGFS SLLQQLRIYP SSFNEALVVN CHMMLRYIPE EPLTSSSSSL RTVFLKQLRS LNPRIVTLIE EDVDLTSENL VNRLKSAFNY
301: FWIPFDTTDT FMSEQRRWYE AEISWKIENV VAKEGAERVE RTETKRRWIE RMREAEFGGV RVKEDAVADV KAMLEEHAVG WGMKKEDDDE SLVLTWKGHS
401: VVFATVWVPI

Arabidopsis Description

SCL32Scarecrow-like protein 32 [Source:UniProtKB/Swiss-Prot;Acc:Q9SN22]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.