Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 1
- mitochondrion 4
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra036041.1-P | Field mustard | mitochondrion | 82.2 | 80.62 |
| CDY30617 | Canola | mitochondrion | 81.95 | 80.38 |
| CDY58198 | Canola | mitochondrion | 80.98 | 79.43 |
| AT5G67411.1 | Thale cress | cytosol, mitochondrion, nucleus | 33.41 | 67.82 |
| VIT_07s0129g00340.t01 | Wine grape | plastid | 60.98 | 54.95 |
| PGSC0003DMT400064187 | Potato | plastid | 58.54 | 54.79 |
| Solyc02g092570.1.1 | Tomato | plastid | 57.8 | 54.11 |
| EER97471 | Sorghum | cytosol | 56.83 | 51.21 |
| GSMUA_Achr10P... | Banana | plastid | 56.83 | 51.21 |
| Zm00001d021998_P001 | Maize | plastid | 56.34 | 50.66 |
| GSMUA_Achr6P16880_001 | Banana | cytosol, plasma membrane, plastid | 55.85 | 50.11 |
| KRH04459 | Soybean | plastid | 58.78 | 50.0 |
| Zm00001d006744_P001 | Maize | plastid | 55.61 | 50.0 |
| TraesCS2D01G193300.1 | Wheat | plastid | 55.61 | 49.67 |
| GSMUA_Achr6P07790_001 | Banana | plastid | 55.12 | 49.45 |
| TraesCS2A01G194600.1 | Wheat | plastid | 55.12 | 49.24 |
| HORVU2Hr1G035120.1 | Barley | cytosol | 54.88 | 49.13 |
| Os07t0589200-00 | Rice | cytosol | 55.61 | 48.2 |
| KRH58050 | Soybean | cytosol | 59.27 | 46.29 |
| TraesCS2B01G212300.1 | Wheat | endoplasmic reticulum, plasma membrane | 54.88 | 44.55 |
| AT4G37650.1 | Thale cress | cytosol, plastid | 30.0 | 23.16 |
| AT3G13840.1 | Thale cress | cytosol | 27.32 | 21.96 |
Protein Annotations
| MapMan:15.5.12 | EntrezGene:824157 | ProteinID:AEE78610.1 | EMBL:AK226623 | ArrayExpress:AT3G49950 | EnsemblPlantsGene:AT3G49950 |
| RefSeq:AT3G49950 | TAIR:AT3G49950 | RefSeq:AT3G49950-TAIR-G | EnsemblPlants:AT3G49950.1 | TAIR:AT3G49950.1 | Unigene:At.50260 |
| EMBL:BT012553 | ProteinID:CAB62103.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR005202 | RefSeq:NP_190564.1 | PFAM:PF03514 | PO:PO:0000037 |
| PFscan:PS50985 | PANTHER:PTHR31636 | PANTHER:PTHR31636:SF51 | UniProt:Q9SN22 | InterPro:TF_GRAS | UniParc:UPI00000A7DBF |
| SEG:seg | : | : | : | : | : |
Description
SCL32Scarecrow-like protein 32 [Source:UniProtKB/Swiss-Prot;Acc:Q9SN22]
Coordinates
chr3:+:18522466..18523934
Molecular Weight (calculated)
46357.6 Da
IEP (calculated)
6.019
GRAVY (calculated)
-0.078
Length
410 amino acids
Sequence
(BLAST)
(BLAST)
001: MTKTRILNPT RFPSPKPLRG CGDANFMEQL LLHCATAIDS NDAALTHQIL WVLNNIAPPD GDSTQRLTSA FLRALLSRAV SKTPTLSSTI SFLPQADELH
101: RFSVVELAAF VDLTPWHRFG FIAANAAILT AVEGYSTVHI VDLSLTHCMQ IPTLIDAMAS RLNKPPPLLK LTVVSSSDHF PPFINISYEE LGSKLVNFAT
201: TRNITMEFTI VPSTYSDGFS SLLQQLRIYP SSFNEALVVN CHMMLRYIPE EPLTSSSSSL RTVFLKQLRS LNPRIVTLIE EDVDLTSENL VNRLKSAFNY
301: FWIPFDTTDT FMSEQRRWYE AEISWKIENV VAKEGAERVE RTETKRRWIE RMREAEFGGV RVKEDAVADV KAMLEEHAVG WGMKKEDDDE SLVLTWKGHS
401: VVFATVWVPI
101: RFSVVELAAF VDLTPWHRFG FIAANAAILT AVEGYSTVHI VDLSLTHCMQ IPTLIDAMAS RLNKPPPLLK LTVVSSSDHF PPFINISYEE LGSKLVNFAT
201: TRNITMEFTI VPSTYSDGFS SLLQQLRIYP SSFNEALVVN CHMMLRYIPE EPLTSSSSSL RTVFLKQLRS LNPRIVTLIE EDVDLTSENL VNRLKSAFNY
301: FWIPFDTTDT FMSEQRRWYE AEISWKIENV VAKEGAERVE RTETKRRWIE RMREAEFGGV RVKEDAVADV KAMLEEHAVG WGMKKEDDDE SLVLTWKGHS
401: VVFATVWVPI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.