Factsheet for GSMUA_Achr10P11390_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
cytosol 1
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P16880_001	Banana	cytosol, plasma membrane, plastid	81.54	81.18
GSMUA_Achr6P07790_001	Banana	plastid	80.22	79.87
VIT_07s0129g00340.t01	Wine grape	plastid	65.93	65.93
EER97471	Sorghum	cytosol	65.93	65.93
TraesCS2D01G193300.1	Wheat	plastid	65.93	65.36
TraesCS2A01G194600.1	Wheat	plastid	65.93	65.36
Zm00001d021998_P001	Maize	plastid	65.49	65.35
Zm00001d006744_P001	Maize	plastid	65.27	65.13
HORVU2Hr1G035120.1	Barley	cytosol	64.84	64.41
Os07t0589200-00	Rice	cytosol	66.59	64.06
Solyc02g092570.1.1	Tomato	plastid	61.32	63.7
PGSC0003DMT400064187	Potato	plastid	61.32	63.7
AT5G67411.1	Thale cress	cytosol, mitochondrion, nucleus	25.93	58.42
TraesCS2B01G212300.1	Wheat	endoplasmic reticulum, plasma membrane	64.84	58.42
AT3G49950.1	Thale cress	mitochondrion	51.21	56.83
CDY12844	Canola	cytosol, mitochondrion, plastid	52.75	55.43
KRH04459	Soybean	plastid	58.68	55.39
CDY30617	Canola	mitochondrion	50.33	54.78
CDY58198	Canola	mitochondrion	50.11	54.55
Bra036041.1-P	Field mustard	mitochondrion	50.11	54.55
KRH58050	Soybean	cytosol	58.68	50.86
GSMUA_Achr6P24300_001	Banana	cytosol, peroxisome, plastid	43.08	46.45
GSMUA_Achr6P21350_001	Banana	cytosol	28.13	31.92
GSMUA_Achr10P...	Banana	cytosol	27.03	30.6
GSMUA_Achr9P02380_001	Banana	cytosol	27.03	30.07
GSMUA_Achr1P22470_001	Banana	cytosol, mitochondrion, nucleus, plastid	27.69	23.68
GSMUA_Achr8P30950_001	Banana	mitochondrion	27.25	23.4
GSMUA_Achr4P16460_001	Banana	nucleus	25.49	21.85
GSMUA_Achr10P...	Banana	cytosol, nucleus, plastid	21.32	21.7

Protein Annotations

MapMan:15.5.12	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr10G11390_001	EnsemblPlants:GSMUA_Achr10P11390_001	EnsemblPlants:GSMUA_Achr10T11390_001	InterPro:IPR005202
UniProt:M0RHB5	PFAM:PF03514	PFscan:PS50985	PANTHER:PTHR31636	PANTHER:PTHR31636:SF51	InterPro:TF_GRAS
UniParc:UPI000296670E	SEG:seg	:	:	:	:

Description

Scarecrow-like protein 32 [Source:GMGC_GENE;Acc:GSMUA_Achr10G11390_001]

Coordinates

chr10:+:20878786..20880153

Molecular Weight (calculated)

50356.5 Da

IEP (calculated)

5.938

GRAVY (calculated)

-0.031

Length

455 amino acids

Sequence
(BLAST)

001: MMQFTRSAPP LTSIHPSGLG PCLDDDASKH SLHRSWPWPG LLTSSKSLGR LNTASCMEQL LVHCANAIES NDATLAQQIL WVLNNIAPPD GDSNQRLTSA
101: FLRALIARAS KTGSCKMLTA VAARADADLA IHLHRFSAID LASFIDLTPW HRFGYAAANS AIVEAVEGLP VVHIVDLSTT HCMQVPTLID LLANRPEGPP
201: FIRLTVPTFT TTATPPLLDM SYDELGSRLV NFARSRNVAM EFIMIPSDPS DAFDSLIEQL RVQRLVSEGE AVIVNCQMLP HYIPEETVGA IVSTMNVNSP
301: ILSLRTMFLK ALRSLEPTLV TLVDEDADFT SCDVVGRLRS AFNYLWIPYD AVDTFLPKGS EQRRWYEAGL CWKIENVVAQ EGLQRVERLE PKGRWGQRMR
401: AAGFRSVRFT EEAAGEVKSM LGEHAAGWGL KREDEDLMLT WKGHNVVFAS AWMPS

Best Arabidopsis Sequence Match ( AT3G49950.1 )
(BLAST)

001: MTKTRILNPT RFPSPKPLRG CGDANFMEQL LLHCATAIDS NDAALTHQIL WVLNNIAPPD GDSTQRLTSA FLRALLSRAV SKTPTLSSTI SFLPQADELH
101: RFSVVELAAF VDLTPWHRFG FIAANAAILT AVEGYSTVHI VDLSLTHCMQ IPTLIDAMAS RLNKPPPLLK LTVVSSSDHF PPFINISYEE LGSKLVNFAT
201: TRNITMEFTI VPSTYSDGFS SLLQQLRIYP SSFNEALVVN CHMMLRYIPE EPLTSSSSSL RTVFLKQLRS LNPRIVTLIE EDVDLTSENL VNRLKSAFNY
301: FWIPFDTTDT FMSEQRRWYE AEISWKIENV VAKEGAERVE RTETKRRWIE RMREAEFGGV RVKEDAVADV KAMLEEHAVG WGMKKEDDDE SLVLTWKGHS
401: VVFATVWVPI

Arabidopsis Description

SCL32Scarecrow-like protein 32 [Source:UniProtKB/Swiss-Prot;Acc:Q9SN22]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.