CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH04459	Soybean	plastid	75.81	82.57
VIT_07s0129g00340.t01	Wine grape	plastid	60.19	69.45
Solyc02g092570.1.1	Tomato	plastid	57.14	68.49
PGSC0003DMT400064187	Potato	plastid	56.57	67.81
AT5G67411.1	Thale cress	cytosol, mitochondrion, nucleus	24.19	62.87
AT3G49950.1	Thale cress	mitochondrion	46.29	59.27
GSMUA_Achr10P...	Banana	plastid	50.86	58.68
GSMUA_Achr6P07790_001	Banana	plastid	50.67	58.21
EER97471	Sorghum	cytosol	49.71	57.36
CDY12844	Canola	cytosol, mitochondrion, plastid	47.05	57.04
GSMUA_Achr6P16880_001	Banana	cytosol, plasma membrane, plastid	49.14	56.46
Zm00001d021998_P001	Maize	plastid	48.95	56.36
Zm00001d006744_P001	Maize	plastid	48.95	56.36
TraesCS2D01G193300.1	Wheat	plastid	48.76	55.77
TraesCS2A01G194600.1	Wheat	plastid	48.38	55.34
Bra036041.1-P	Field mustard	mitochondrion	44.0	55.26
CDY58198	Canola	mitochondrion	44.0	55.26
CDY30617	Canola	mitochondrion	43.81	55.02
HORVU2Hr1G035120.1	Barley	cytosol	48.0	55.02
Os07t0589200-00	Rice	cytosol	49.52	54.97
TraesCS2B01G212300.1	Wheat	endoplasmic reticulum, plasma membrane	49.52	51.49
KRH26849	Soybean	cytosol	36.0	41.09
KRH22503	Soybean	cytosol	36.0	40.47
KRH10104	Soybean	cytosol	24.76	29.75
KRH23228	Soybean	cytosol	24.19	28.67
KRH28353	Soybean	plastid	25.9	28.22
KRH77129	Soybean	plastid	25.33	27.94
KRH58109	Soybean	cytosol, plastid	24.0	25.25
KRH04424	Soybean	plastid	23.24	24.25
KRH06192	Soybean	nucleus	23.43	22.65
KRH47610	Soybean	cytosol	22.67	21.96

Protein Annotations

MapMan:15.5.12	UniProt:A0A0R0JYL3	EMBL:ACUP02003194	EnsemblPlantsGene:GLYMA_05G103400	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR005202	EnsemblPlants:KRH58050	ProteinID:KRH58050
ProteinID:KRH58050.1	PFAM:PF03514	PFscan:PS50985	PANTHER:PTHR31636	PANTHER:PTHR31636:SF51	InterPro:TF_GRAS
UniParc:UPI0006EE0A40	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr5:+:27531556..27534267

Molecular Weight (calculated)

58426.7 Da

IEP (calculated)

6.856

GRAVY (calculated)

-0.153

Length

525 amino acids

Sequence
(BLAST)

001: MTRERVSQKL NCLKSLPQCP PLHDKIPTPI YKQFDGRLLH MPPKSNTSSA SYGYSQFHPQ QPGSLFPKAK VPTTTTSPRP WACTCFPTTS KALSNFGDAN
101: CMEQLLVHCA NAIETNDVTL AQQILWVLNN IAPPDGDSNQ RLASGFLRAL TARAAKTGTC KMLVPAGGTN LSIDTHRFNV IELANFVDLT PWHRFGFTAA
201: NAAILEATEG FSVIHIVDLS LTHCMQIPTL VDAIASRNYH EVPPPIIKLT VAADASFRDN IPPMLDLSYD ELGAKLVNFA RSRNMVMEFR VVSSSYRDGF
301: AGLIEHLRVQ QQHFVYAAES RTTPSEALVI NCHMMLHYIP DETLSDTTGL TSFLYDSSSL AASSAVSVTP TSSLRSLFLK SLRGLDPTVV ILVDEDADLT
401: SNNLVCRLRS AFNYLWIPYD TVDTFLPRGS KQRQWYEADI CWKIENVIAH EGVQRVERVE PKNRWEQRMK NASFQGVAFS EDSVAEVKAM LDEHAAGWGL
501: KKEDEHIVLT WKGHNVVFAS AWLPA

Best Arabidopsis Sequence Match ( AT3G49950.1 )
(BLAST)

001: MTKTRILNPT RFPSPKPLRG CGDANFMEQL LLHCATAIDS NDAALTHQIL WVLNNIAPPD GDSTQRLTSA FLRALLSRAV SKTPTLSSTI SFLPQADELH
101: RFSVVELAAF VDLTPWHRFG FIAANAAILT AVEGYSTVHI VDLSLTHCMQ IPTLIDAMAS RLNKPPPLLK LTVVSSSDHF PPFINISYEE LGSKLVNFAT
201: TRNITMEFTI VPSTYSDGFS SLLQQLRIYP SSFNEALVVN CHMMLRYIPE EPLTSSSSSL RTVFLKQLRS LNPRIVTLIE EDVDLTSENL VNRLKSAFNY
301: FWIPFDTTDT FMSEQRRWYE AEISWKIENV VAKEGAERVE RTETKRRWIE RMREAEFGGV RVKEDAVADV KAMLEEHAVG WGMKKEDDDE SLVLTWKGHS
401: VVFATVWVPI

Arabidopsis Description

SCL32Scarecrow-like protein 32 [Source:UniProtKB/Swiss-Prot;Acc:Q9SN22]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.