Factsheet for HORVU1Hr1G066390.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G319500.1	Wheat	cytosol	95.9	95.9
TraesCS1A01G319700.1	Wheat	cytosol	95.66	95.66
TraesCS1B01G332000.1	Wheat	cytosol	94.7	94.7
EES18455	Sorghum	cytosol	76.39	74.76
Os05t0500600-01	Rice	cytosol	74.7	72.94
Zm00001d038609_P001	Maize	cytosol	73.49	71.6
KXG33889	Sorghum	cytosol	51.81	66.98
GSMUA_Achr6P24300_001	Banana	cytosol, peroxisome, plastid	55.9	54.98
VIT_12s0059g02770.t01	Wine grape	cytosol	51.57	48.09
Solyc07g052960.1.1	Tomato	cytosol	49.16	47.55
PGSC0003DMT400067360	Potato	cytosol	48.92	47.54
KRH26849	Soybean	cytosol	50.6	45.65
KRH22503	Soybean	cytosol	50.12	44.54
HORVU2Hr1G035120.1	Barley	cytosol	44.82	40.61
HORVU2Hr1G104160.1	Barley	cytosol	17.59	27.76
HORVU2Hr1G104170.1	Barley	cytosol	7.95	23.24
HORVU5Hr1G117780.1	Barley	mitochondrion	23.61	23.0
HORVU5Hr1G097760.3	Barley	mitochondrion, plastid	20.48	22.55
HORVU2Hr1G035730.4	Barley	cytosol, plastid	32.29	22.48
HORVU7Hr1G060780.1	Barley	cytosol, plastid	23.61	20.37
HORVU2Hr1G040860.3	Barley	mitochondrion	11.08	20.0
HORVU7Hr1G115720.3	Barley	mitochondrion	21.45	19.73

Protein Annotations

EnsemblPlants:HORVU1Hr1G066390.1	EnsemblPlantsGene:HORVU1Hr1G066390	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR005202	InterPro:TF_GRAS	PANTHER:PTHR31636
PANTHER:PTHR31636:SF5	PFAM:PF03514	PFscan:PS50985	UniParc:UPI000B47F5DC	UniProt:A0A287G0V3	MapMan:15.5.12

Description

No Description!

Coordinates

chrchr1H:+:472662646..472664296

Molecular Weight (calculated)

44469.0 Da

IEP (calculated)

6.596

GRAVY (calculated)

-0.123

Length

415 amino acids

Sequence
(BLAST)

001: MEQELRSGGA VRAQSTMCFS GALVDGPRIQ QLLLHCAAAL ESNDVTLAQQ AMWVLNNIAS AQGDPNQRLT SSLLRGLVAR ACRTCGSPRA DSMGPPPALG
101: SQRAMSVTEL ADYVDLTPWH RFGFTASNGA ILRAVAGRNA VHVVDLGVTR CMQWPTLIDA LSKRPGGAPA LRITVPSVRP AGPPLLGVPD EEIGLRLANF
201: AKSKGVQLEF NVVNKSTATS TPSPAKLQTV CQELGSVLSD PPALRLRDSE ALVVNCQSWL RHVAPGSRDG FMDAVRALDP CLVTVTDEDA DLDSPSLATR
301: IAGCFNFHWI LFDALDTSAP RDSPRRLEHE AAVGQKIESV VGADGTERSE SGARLAERMR RKGFAGVGFG EDEVAEVRHL LSEHATGWGV KREEDMLVLT
401: WKGHAAVFTT AWAPN

Best Arabidopsis Sequence Match ( AT3G49950.1 )
(BLAST)

001: MTKTRILNPT RFPSPKPLRG CGDANFMEQL LLHCATAIDS NDAALTHQIL WVLNNIAPPD GDSTQRLTSA FLRALLSRAV SKTPTLSSTI SFLPQADELH
101: RFSVVELAAF VDLTPWHRFG FIAANAAILT AVEGYSTVHI VDLSLTHCMQ IPTLIDAMAS RLNKPPPLLK LTVVSSSDHF PPFINISYEE LGSKLVNFAT
201: TRNITMEFTI VPSTYSDGFS SLLQQLRIYP SSFNEALVVN CHMMLRYIPE EPLTSSSSSL RTVFLKQLRS LNPRIVTLIE EDVDLTSENL VNRLKSAFNY
301: FWIPFDTTDT FMSEQRRWYE AEISWKIENV VAKEGAERVE RTETKRRWIE RMREAEFGGV RVKEDAVADV KAMLEEHAVG WGMKKEDDDE SLVLTWKGHS
401: VVFATVWVPI

Arabidopsis Description

SCL32Scarecrow-like protein 32 [Source:UniProtKB/Swiss-Prot;Acc:Q9SN22]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.