Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU2Hr1G104170.1 | Barley | cytosol | 28.16 | 89.44 |
| HORVU5Hr1G097760.3 | Barley | mitochondrion, plastid | 48.78 | 58.36 |
| HORVU5Hr1G117780.1 | Barley | mitochondrion | 54.77 | 57.98 |
| HORVU2Hr1G104160.1 | Barley | cytosol | 32.59 | 55.89 |
| TraesCS2A01G460200.1 | Wheat | nucleus | 61.64 | 53.88 |
| TraesCS2D01G460500.1 | Wheat | nucleus | 61.64 | 53.88 |
| TraesCS2B01G481900.1 | Wheat | nucleus | 61.64 | 53.56 |
| HORVU7Hr1G060780.1 | Barley | cytosol, plastid | 55.88 | 52.39 |
| Os03t0408600-01 | Rice | nucleus | 49.67 | 42.83 |
| Zm00001d029474_P001 | Maize | cytosol | 49.22 | 42.21 |
| PGSC0003DMT400036577 | Potato | cytosol | 11.75 | 40.77 |
| Zm00001d047266_P001 | Maize | nucleus | 48.34 | 40.75 |
| OQU92409 | Sorghum | cytosol | 49.0 | 39.82 |
| HORVU2Hr1G040860.3 | Barley | mitochondrion | 14.63 | 28.7 |
| GSMUA_Achr10P... | Banana | cytosol, nucleus, plastid | 27.94 | 28.19 |
| Solyc03g123400.1.1 | Tomato | extracellular, nucleus | 33.04 | 27.49 |
| PGSC0003DMT400089692 | Potato | nucleus | 32.82 | 27.31 |
| VIT_09s0002g01190.t01 | Wine grape | nucleus | 32.82 | 27.16 |
| KRH47610 | Soybean | cytosol | 32.15 | 26.75 |
| AT3G13840.1 | Thale cress | cytosol | 30.16 | 26.67 |
| KRH06192 | Soybean | nucleus | 31.71 | 26.34 |
| Bra027378.1-P | Field mustard | cytosol | 27.49 | 24.31 |
| CDX97537 | Canola | cytosol | 27.05 | 23.97 |
| HORVU1Hr1G066390.1 | Barley | cytosol | 19.73 | 21.45 |
| HORVU2Hr1G035120.1 | Barley | cytosol | 20.62 | 20.31 |
| HORVU2Hr1G035730.4 | Barley | cytosol, plastid | 20.4 | 15.44 |
| Zm00001d048624_P001 | Maize | nucleus | 6.21 | 12.73 |
Protein Annotations
| EnsemblPlants:HORVU7Hr1G115720.3 | EnsemblPlantsGene:HORVU7Hr1G115720 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR005202 | InterPro:SCL29/NSP1 | InterPro:TF_GRAS |
| PANTHER:PTHR31636 | PANTHER:PTHR31636:SF40 | PFAM:PF03514 | PFscan:PS50985 | SEG:seg | UniParc:UPI000B46D4CF |
| UniProt:A0A287XWT4 | MapMan:15.5.12 | MapMan:26.9.1.6.1 | : | : | : |
Description
No Description!
Coordinates
chrchr7H:+:642086669..642088107
Molecular Weight (calculated)
49331.2 Da
IEP (calculated)
11.398
GRAVY (calculated)
-0.295
Length
451 amino acids
Sequence
(BLAST)
(BLAST)
001: TNCRYVYTSP LFLRRGRTCL PECRRCNRAC ACAAMQAGGR GKATTNKQGW IDAFSSSEMG PWASRSGVGP GREVGGAAAG SLRRRRRGAQ PVPRATPLLR
101: ARRARGLLRR RQPQACRVRA ASALASPPCR SWPRGRRGRE GAGRMRVPDA VARRAEPRMF RASLIKFHEV SPWFTLPNTL ANAAISQLAS AAPRPLHLVD
201: IDVSHEVQWP TLLESLTRMA AGRAPPFVRL TVVATPPVPF SASPPGYDFS PHLLRYAKSI KLDFEIGRAA SLDSAHGFCT APDEALVVCL QFRLGHVTAE
301: ERTYIIRRVK DLKPQLMVLS ELDVWGNGST AGEFTARLEL LWRFLESTHA AFKGRDGEDR RLLEAEAGSA VAVAAAREAV GREGWRDRMT AAGFDQVAFG
401: GEAVESARSL LRKYDNGWEM STTAAATGGG GAVALRWKGQ PVSFCSLWWR A
101: ARRARGLLRR RQPQACRVRA ASALASPPCR SWPRGRRGRE GAGRMRVPDA VARRAEPRMF RASLIKFHEV SPWFTLPNTL ANAAISQLAS AAPRPLHLVD
201: IDVSHEVQWP TLLESLTRMA AGRAPPFVRL TVVATPPVPF SASPPGYDFS PHLLRYAKSI KLDFEIGRAA SLDSAHGFCT APDEALVVCL QFRLGHVTAE
301: ERTYIIRRVK DLKPQLMVLS ELDVWGNGST AGEFTARLEL LWRFLESTHA AFKGRDGEDR RLLEAEAGSA VAVAAAREAV GREGWRDRMT AAGFDQVAFG
401: GEAVESARSL LRKYDNGWEM STTAAATGGG GAVALRWKGQ PVSFCSLWWR A
001: MLLEETEPPN QTLDHVLSWL EDSVSLSPLP GFDDSYLLHE FDGSQTWEWD QTQDPEHGFI QSYSQDLSAA YVGCEATNLE VVTEAPSIDL DLPPEIQQPN
101: DQSRKRSHDG FLEAQQVKKS ARSKRKAIKS SEKSSKDGNK EGRWAEKLLN PCALAITASN SSRVQHYLCV LSELASSSGD ANRRLAAFGL RALQHHLSSS
201: SVSSSFWPVF TFASAEVKMF QKTLLKFYEV SPWFALPNNM ANSAILQILA QDPKDKKDLH IIDIGVSHGM QWPTLLEALS CRLEGPPPRV RITVISDLTA
301: DIPFSVGPPG YNYGSQLLGF ARSLKINLQI SVLDKLQLID TSPHENLIVC AQFRLHHLKH SINDERGETL KAVRSLRPKG VVLCENNGEC SSSADFAAGF
401: SKKLEYVWKF LDSTSSGFKE ENSEERKLME GEATKVLMNA GDMNEGKEKW YERMREAGFF VEAFEEDAVD GAKSLLRKYD NNWEIRMEDG DTFAGLMWKG
501: EAVSFCSLWK
101: DQSRKRSHDG FLEAQQVKKS ARSKRKAIKS SEKSSKDGNK EGRWAEKLLN PCALAITASN SSRVQHYLCV LSELASSSGD ANRRLAAFGL RALQHHLSSS
201: SVSSSFWPVF TFASAEVKMF QKTLLKFYEV SPWFALPNNM ANSAILQILA QDPKDKKDLH IIDIGVSHGM QWPTLLEALS CRLEGPPPRV RITVISDLTA
301: DIPFSVGPPG YNYGSQLLGF ARSLKINLQI SVLDKLQLID TSPHENLIVC AQFRLHHLKH SINDERGETL KAVRSLRPKG VVLCENNGEC SSSADFAAGF
401: SKKLEYVWKF LDSTSSGFKE ENSEERKLME GEATKVLMNA GDMNEGKEKW YERMREAGFF VEAFEEDAVD GAKSLLRKYD NNWEIRMEDG DTFAGLMWKG
501: EAVSFCSLWK
Arabidopsis Description
SCL29Scarecrow-like protein 29 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRW3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.