Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 1
- plasma membrane 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU6Hr1G014620.1 | Barley | plasma membrane | 64.66 | 68.81 |
| TraesCS6B01G112200.1 | Wheat | plasma membrane | 64.66 | 68.81 |
| Zm00001d019447_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 64.66 | 68.81 |
| TraesCSU01G016400.1 | Wheat | plasma membrane | 63.79 | 67.89 |
| TraesCS6A01G090100.1 | Wheat | plasma membrane | 62.07 | 66.06 |
| GSMUA_AchrUn_... | Banana | plasma membrane, vacuole | 56.03 | 60.19 |
| KXG34939 | Sorghum | plastid | 65.52 | 48.41 |
| KRH50075 | Soybean | cytosol, plasma membrane, vacuole | 37.93 | 41.12 |
| KRH20422 | Soybean | cytosol, plasma membrane, vacuole | 37.07 | 40.19 |
| CDY46615 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 36.21 | 40.0 |
| Solyc02g078010.2.1 | Tomato | endoplasmic reticulum, plasma membrane, vacuole | 37.07 | 38.74 |
| AT1G28250.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 32.76 | 37.25 |
| Bra032886.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 25.86 | 35.29 |
| CDY35725 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 27.59 | 33.33 |
| PGSC0003DMT400076381 | Potato | endoplasmic reticulum, plasma membrane, vacuole | 26.72 | 27.19 |
| CDY46284 | Canola | cytosol, peroxisome, plasma membrane | 36.21 | 22.83 |
Protein Annotations
| EnsemblPlants:Os07t0299600-01 | EnsemblPlantsGene:Os07g0299600 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | ProteinID:BAT01075.1 |
| SEG:seg | TMHMM:TMhelix | UniParc:UPI0003939812 | UniProt:A0A0P0X544 | MapMan:35.2 | : |
Description
Hypothetical conserved gene. (Os07t0299600-01)
Coordinates
chr7:+:11780192..11786232
Molecular Weight (calculated)
12686.8 Da
IEP (calculated)
6.955
GRAVY (calculated)
0.624
Length
116 amino acids
Sequence
(BLAST)
(BLAST)
001: PSSLLSSLRH LAAEQGRGAD LHLASRGGEG ILAPTWFVLK ITFLLLAFCF TAMLSLAFFS SDFMIIAHVL LLVTIGTVLF VLLNRFLAET GLVPVEQQMK
101: EMGIHKIEAT EKDKGN
101: EMGIHKIEAT EKDKGN
001: MEKKSQISST EAVFLGALAP GVNGPTWNTL RFAFLLLGLC LAFMLSVAFT SGQSMLLVHV GFLIVIASTL FILLNWFLAQ TGLVQVETQM QELNLLPNDK
101: TK
101: TK
Arabidopsis Description
F3H9.10 protein [Source:UniProtKB/TrEMBL;Acc:Q9FZ98]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.