Factsheet for Os11t0264700-01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

nucleus 1
mitochondrion 2
cytosol 1
plastid 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os11t0265200-00	Rice	extracellular	50.45	48.8
GSMUA_Achr1P13390_001	Banana	cytosol	44.34	47.34
Solyc06g053340.2.1	Tomato	cytosol	40.72	40.63
PGSC0003DMT400042138	Potato	cytosol	40.5	40.41
VIT_05s0102g01140.t01	Wine grape	cytosol	40.5	40.32
Bra030639.1-P	Field mustard	cytosol	38.46	40.19
CDY15562	Canola	cytosol	38.46	40.19
AT1G06110.1	Thale cress	cytosol	39.59	40.14
CDX86535	Canola	cytosol	38.69	39.58
CDY10172	Canola	cytosol	36.88	37.56
VIT_05s0102g01150.t01	Wine grape	cytosol	39.14	37.53
KRH24605	Soybean	cytosol	37.56	37.47
KRH29609	Soybean	cytosol	37.1	37.02
Bra015474.1-P	Field mustard	cytosol	31.22	34.76
CDY47716	Canola	cytosol	29.86	34.74

Protein Annotations

Gene3D:2.60.40.1470	MapMan:35.1	EntrezGene:4350241	ProteinID:ABA92489.2	EMBL:AK103706	InterPro:ApaG_domain
InterPro:ApaG_sf	ProteinID:BAT13521.1	ProteinID:EAZ18023.1	InterPro:F-box-like_dom_sf	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR007474	InterPro:IPR036767	EnsemblPlantsGene:Os11g0264700	EnsemblPlants:Os11t0264700-01	PFAM:PF04379
PFscan:PS51087	PANTHER:PTHR14289	PANTHER:PTHR14289:SF26	UniProt:Q2R7K1	SUPFAM:SSF110069	SUPFAM:SSF81383
UniParc:UPI0000D89A4F	RefSeq:XP_015615195.1	SEG:seg	:	:	:

Description

F-box protein 599ApaG domain containing protein. (Os11t0264700-01);Cyclin-like F-box domain containing protein. (Os11t0264700-03)

Coordinates

chr11:-:9006410..9010706

Molecular Weight (calculated)

49048.3 Da

IEP (calculated)

7.387

GRAVY (calculated)

0.073

Length

442 amino acids

Sequence
(BLAST)

001: MASPAKAQRR PEGASVLETL PALPLAIIIA KAGPRCAAAL ACASSTLRAA ASGEALWRHF CSDDFALDAP LAPGDLPLPS FKDAYKAWFQ SFGMYPLPLV
101: KRVKIFWSSF RAWLCEYFPE GLRTLGEGVS EAEIAVAECN LGLVLPMPTK LLYRFCNGQL HIGRGEEVSY GVMGGYDYVH QRYTVRLLPL AHHAVQKNSN
201: YIVVATSCFG EKIFLLDCAS GRLYVGTKYW NEEREIMACV PKATIRLAVD DDHGMPQDGF LLWLEEHLSR LQDGLIKVQS CKFPMLARHI SLYPVQLPYC
301: SSASMHGIKV RASAVFAPEN SAFADYRCRY SYYFSIRLSL PEAFVVDGKW YSSFQLQSCH YTIQIGDEVL PYTCNYGGHG KCPLLRCGEE LFVYGCSISA
401: ALEPGSVMGN LTLVPWRCGQ PRGSPFIADI APFPLHPPDY IF

Best Arabidopsis Sequence Match ( AT1G06110.1 )
(BLAST)

001: MGLEDAGDLV LHIVLSKIGP ENTARVACVS KRLKVSASEE SLWSIFCSND LNISTPLDPH GDPAPSFKRA YQLWRESFRM YPWNLVKRVR LCWDNLKQWL
101: TLNFPEAKAT LRKGVTEDDL QEFETSLKVK LPLPTRLLYR FVDGQELSSP NGLDGSLGLI GGYSAYSHDV NVYLLPLKEV MRETKESFMR DLGFSSRLDL
201: IVMAASVVAS LKIFLLDCTT GQLFTGTSNR QLLPCVPDAL VRSVHDTNGD QQQDAMLLWL EEHGRRLQTG TINVRQQNNV KSISLFPEIP PLCSVSVTNG
301: VQVRASSVFI PEISNLRDQP PAYWYAYSIR MSLMPEGCIL NGTHHSSCQL YWRHWVIRAD NEVIDNVNGE AVIGKYPLLQ AGEEEFVYES CSSFPTTAGS
401: IDGSFTFVPG SLRDPKGSQF EVKVVEFPLE LPDYIF

Arabidopsis Description

SKIP16F-box protein SKIP16 [Source:UniProtKB/Swiss-Prot;Acc:Q9LND7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.