Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 5
- golgi 7
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plasma membrane:
27800704
|
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G143600.4 | Wheat | plasma membrane | 83.9 | 84.63 |
| TraesCS5B01G142600.1 | Wheat | unclear | 83.46 | 84.19 |
| TraesCS5D01G148400.1 | Wheat | unclear | 83.24 | 83.88 |
| EES16726 | Sorghum | extracellular | 82.59 | 82.23 |
| Zm00001d041880_P001 | Maize | extracellular, plasma membrane | 81.61 | 81.7 |
| HORVU5Hr1G045820.9 | Barley | extracellular, plasma membrane, vacuole | 80.09 | 80.79 |
| GSMUA_Achr2P21230_001 | Banana | extracellular, golgi, vacuole | 63.66 | 66.63 |
| AT2G32810.1 | Thale cress | golgi, vacuole | 60.94 | 63.13 |
| PGSC0003DMT400067956 | Potato | extracellular | 61.04 | 62.89 |
| CDY19166 | Canola | golgi, vacuole | 60.61 | 62.73 |
| CDY23785 | Canola | vacuole | 60.94 | 62.71 |
| Solyc09g092160.2.1 | Tomato | extracellular | 60.72 | 62.56 |
| Bra021814.1-P | Field mustard | plastid | 60.72 | 62.49 |
| KRH42784 | Soybean | nucleus | 59.19 | 59.85 |
| Os06t0573600-01 | Rice | plasma membrane, vacuole | 40.48 | 52.03 |
| Os06t0628500-00 | Rice | extracellular, golgi, vacuole | 16.43 | 51.36 |
| Os01t0580200-01 | Rice | golgi, vacuole | 45.81 | 50.91 |
| Os03t0165400-01 | Rice | vacuole | 45.59 | 49.82 |
| Os02t0219200-01 | Rice | peroxisome, vacuole | 26.55 | 48.8 |
| Os03t0255100-01 | Rice | extracellular | 49.18 | 47.28 |
| Os05t0428100-00 | Rice | golgi, vacuole | 39.93 | 45.25 |
| Os01t0875500-01 | Rice | endoplasmic reticulum, mitochondrion, nucleus, vacuole | 43.96 | 43.96 |
| Os09t0539200-01 | Rice | vacuole | 21.22 | 43.72 |
| Os10t0330600-01 | Rice | extracellular | 38.63 | 42.87 |
| Os10t0340600-01 | Rice | extracellular, golgi, vacuole | 37.98 | 42.15 |
| Os08t0549200-01 | Rice | plasma membrane | 36.56 | 39.62 |
Protein Annotations
| KEGG:00052+3.2.1.23 | KEGG:00511+3.2.1.23 | KEGG:00531+3.2.1.23 | KEGG:00600+3.2.1.23 | KEGG:00604+3.2.1.23 | Gene3D:2.60.120.260 |
| Gene3D:2.60.120.740 | MapMan:21.3.2.2.2 | Gene3D:3.20.20.80 | ProteinID:ABA97655.2 | EMBL:AK065546 | ProteinID:BAF29692.1 |
| ProteinID:BAT16936.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 | GO:GO:0004565 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005618 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005773 | GO:GO:0005774 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009505 |
| GO:GO:0016020 | GO:GO:0016787 | GO:GO:0016798 | GO:GO:0030246 | GO:GO:0030312 | GO:GO:0048046 |
| InterPro:Galactose-bd-like_sf | InterPro:Gly_Hdrlase_35_cat | InterPro:Glyco_hydro_35_CS | InterPro:Glycoside_Hdrlase_35 | InterPro:Glycoside_hydrolase_SF | InterPro:IPR000922 |
| InterPro:IPR008979 | InterPro:Lectin_gal-bd_dom | EnsemblPlantsGene:Os12g0429200 | EnsemblPlants:Os12t0429200-01 | PFAM:PF01301 | PFAM:PF02140 |
| PRINTS:PR00742 | ScanProsite:PS01182 | PFscan:PS50228 | PFscan:PS51257 | PANTHER:PTHR23421 | PANTHER:PTHR23421:SF74 |
| UniProt:Q0INM3 | SUPFAM:SSF49785 | SUPFAM:SSF51445 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0000DD9E82 |
| SEG:seg | : | : | : | : | : |
Description
BETA-GALACTOSIDASE 13Similar to Relative to SR12 protein (Fragment). (Os12t0429200-01)
Coordinates
chr12:-:13761554..13782378
Molecular Weight (calculated)
101012.0 Da
IEP (calculated)
5.851
GRAVY (calculated)
-0.202
Length
919 amino acids
Sequence
(BLAST)
(BLAST)
001: MAASRGPPLL GFRALALALL LAILLLLGCS AAAAYAGAEG VLRQVVGRRG DDGGGGNFFE PFNVTYDHRA VLIGGKRRML VSAGLHYPRA TPEMWPSLIA
101: KCKEGGADVI ETYVFWNGHE PAKGQYYFEE RFDLVKFAKL VAAEGLFLFL RIGPYACAEW NFGGFPVWLR DIPGIEFRTD NEPFKAEMQT FVTKIVTLMK
201: EEKLYSWQGG PIILQQIENE YGNIQGNYGQ AGKRYMQWAA QMAIGLDTGI PWVMCRQTDA PEEIIDTCNA FYCDGFKPNS YNKPTIWTED WDGWYADWGG
301: ALPHRPAEDS AFAVARFYQR GGSLQNYYMY FGGTNFARTA GGPLQITSYD YDAPIDEYGI LRQPKWGHLK DLHTAIKLCE PALIAVDGSP QYIKLGSMQE
401: AHVYSTGEVH TNGSMAGNAQ ICSAFLANID EHKYASVWIF GKSYSLPPWS VSILPDCENV AFNTARIGAQ TSVFTVESGS PSRSSRHKPS ILSLTSGGPY
501: LSSTWWTSKE TIGTWGGNNF AVQGILEHLN VTKDISDYLW YTTRVNISDA DVAFWSSKGV LPSLTIDKIR DVARVFVNGK LAGSQVGHWV SLKQPIQLVE
601: GLNELTLLSE IVGLQNYGAF LEKDGAGFRG QVTLTGLSDG DVDLTNSLWT YQVGLKGEFS MIYAPEKQGC AGWSRMQKDS VQPFTWYKTM FSTPKGTDPV
701: AIDLGSMGKG QAWVNGHLIG RYWSLVAPES GCSSSCYYPG AYNERKCQSN CGMPTQNWYH IPREWLKESD NLLVLFEETG GDPSLISLEA HYAKTVCSRI
801: SENYYPPLSA WSHLSSGRAS VNAATPELRL QCDDGHVISE ITFASYGTPS GGCLNFSKGN CHASSTLDLV TEACVGNTKC AISVSNDVFG DPCRGVLKDL
901: AVEAKCSPPS TTKEPRGEM
101: KCKEGGADVI ETYVFWNGHE PAKGQYYFEE RFDLVKFAKL VAAEGLFLFL RIGPYACAEW NFGGFPVWLR DIPGIEFRTD NEPFKAEMQT FVTKIVTLMK
201: EEKLYSWQGG PIILQQIENE YGNIQGNYGQ AGKRYMQWAA QMAIGLDTGI PWVMCRQTDA PEEIIDTCNA FYCDGFKPNS YNKPTIWTED WDGWYADWGG
301: ALPHRPAEDS AFAVARFYQR GGSLQNYYMY FGGTNFARTA GGPLQITSYD YDAPIDEYGI LRQPKWGHLK DLHTAIKLCE PALIAVDGSP QYIKLGSMQE
401: AHVYSTGEVH TNGSMAGNAQ ICSAFLANID EHKYASVWIF GKSYSLPPWS VSILPDCENV AFNTARIGAQ TSVFTVESGS PSRSSRHKPS ILSLTSGGPY
501: LSSTWWTSKE TIGTWGGNNF AVQGILEHLN VTKDISDYLW YTTRVNISDA DVAFWSSKGV LPSLTIDKIR DVARVFVNGK LAGSQVGHWV SLKQPIQLVE
601: GLNELTLLSE IVGLQNYGAF LEKDGAGFRG QVTLTGLSDG DVDLTNSLWT YQVGLKGEFS MIYAPEKQGC AGWSRMQKDS VQPFTWYKTM FSTPKGTDPV
701: AIDLGSMGKG QAWVNGHLIG RYWSLVAPES GCSSSCYYPG AYNERKCQSN CGMPTQNWYH IPREWLKESD NLLVLFEETG GDPSLISLEA HYAKTVCSRI
801: SENYYPPLSA WSHLSSGRAS VNAATPELRL QCDDGHVISE ITFASYGTPS GGCLNFSKGN CHASSTLDLV TEACVGNTKC AISVSNDVFG DPCRGVLKDL
901: AVEAKCSPPS TTKEPRGEM
001: MAESIRTFSL QWRILSLIIA LLVYFPILSG SYFKPFNVSY DHRALIIAGK RRMLVSAGIH YPRATPEMWS DLIAKSKEGG ADVVQTYVFW NGHEPVKGQY
101: NFEGRYDLVK FVKLIGSSGL YLHLRIGPYV CAEWNFGGFP VWLRDIPGIE FRTDNEPFKK EMQKFVTKIV DLMREAKLFC WQGGPIIMLQ IENEYGDVEK
201: SYGQKGKDYV KWAASMALGL GAGVPWVMCK QTDAPENIID ACNGYYCDGF KPNSRTKPVL WTEDWDGWYT KWGGSLPHRP AEDLAFAVAR FYQRGGSFQN
301: YYMYFGGTNF GRTSGGPFYI TSYDYDAPLD EYGLRSEPKW GHLKDLHAAI KLCEPALVAA DAPQYRKLGS KQEAHIYHGD GETGGKVCAA FLANIDEHKS
401: AHVKFNGQSY TLPPWSVSIL PDCRHVAFNT AKVGAQTSVK TVESARPSLG SMSILQKVVR QDNVSYISKS WMALKEPIGI WGENNFTFQG LLEHLNVTKD
501: RSDYLWHKTR ISVSEDDISF WKKNGPNSTV SIDSMRDVLR VFVNKQLAGS IVGHWVKAVQ PVRFIQGNND LLLLTQTVGL QNYGAFLEKD GAGFRGKAKL
601: TGFKNGDLDL SKSSWTYQVG LKGEADKIYT VEHNEKAEWS TLETDASPSI FMWYKTYFDP PAGTDPVVLN LESMGRGQAW VNGQHIGRYW NIISQKDGCD
701: RTCDYRGAYN SDKCTTNCGK PTQTRYHVPR SWLKPSSNLL VLFEETGGNP FKISVKTVTA GILCGQVSES HYPPLRKWST PDYINGTMSI NSVAPEVHLH
801: CEDGHVISSI EFASYGTPRG SCDGFSIGKC HASNSLSIVS EACKGRNSCF IEVSNTAFIS DPCSGTLKTL AVMSRCSPSQ NMSDLSF
101: NFEGRYDLVK FVKLIGSSGL YLHLRIGPYV CAEWNFGGFP VWLRDIPGIE FRTDNEPFKK EMQKFVTKIV DLMREAKLFC WQGGPIIMLQ IENEYGDVEK
201: SYGQKGKDYV KWAASMALGL GAGVPWVMCK QTDAPENIID ACNGYYCDGF KPNSRTKPVL WTEDWDGWYT KWGGSLPHRP AEDLAFAVAR FYQRGGSFQN
301: YYMYFGGTNF GRTSGGPFYI TSYDYDAPLD EYGLRSEPKW GHLKDLHAAI KLCEPALVAA DAPQYRKLGS KQEAHIYHGD GETGGKVCAA FLANIDEHKS
401: AHVKFNGQSY TLPPWSVSIL PDCRHVAFNT AKVGAQTSVK TVESARPSLG SMSILQKVVR QDNVSYISKS WMALKEPIGI WGENNFTFQG LLEHLNVTKD
501: RSDYLWHKTR ISVSEDDISF WKKNGPNSTV SIDSMRDVLR VFVNKQLAGS IVGHWVKAVQ PVRFIQGNND LLLLTQTVGL QNYGAFLEKD GAGFRGKAKL
601: TGFKNGDLDL SKSSWTYQVG LKGEADKIYT VEHNEKAEWS TLETDASPSI FMWYKTYFDP PAGTDPVVLN LESMGRGQAW VNGQHIGRYW NIISQKDGCD
701: RTCDYRGAYN SDKCTTNCGK PTQTRYHVPR SWLKPSSNLL VLFEETGGNP FKISVKTVTA GILCGQVSES HYPPLRKWST PDYINGTMSI NSVAPEVHLH
801: CEDGHVISSI EFASYGTPRG SCDGFSIGKC HASNSLSIVS EACKGRNSCF IEVSNTAFIS DPCSGTLKTL AVMSRCSPSQ NMSDLSF
Arabidopsis Description
BGAL9Beta-galactosidase 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCV3]
SUBAcon: [golgi,vacuole]
SUBAcon: [golgi,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.