Factsheet for Zm00001d041880_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular

Predictor Summary:

plastid 1
extracellular 3
endoplasmic reticulum 2
vacuole 2
plasma membrane 3
golgi 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane
Any Predictor:	mitochondrion, plastid, secretory
iPSORT:	plastid
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES16726	Sorghum	extracellular	93.46	92.96
Os12t0429200-01	Rice	plasma membrane	81.7	81.61
TraesCS5D01G148400.1	Wheat	unclear	79.3	79.82
TraesCS5B01G142600.1	Wheat	unclear	79.08	79.69
TraesCS5A01G143600.4	Wheat	plasma membrane	78.87	79.47
HORVU5Hr1G045820.9	Barley	extracellular, plasma membrane, vacuole	76.14	76.73
GSMUA_Achr2P21230_001	Banana	extracellular, golgi, vacuole	62.53	65.38
PGSC0003DMT400067956	Potato	extracellular	59.7	61.44
AT2G32810.1	Thale cress	golgi, vacuole	59.26	61.33
Solyc09g092160.2.1	Tomato	extracellular	59.48	61.21
CDY19166	Canola	golgi, vacuole	59.04	61.04
CDY23785	Canola	vacuole	59.26	60.92
Bra021814.1-P	Field mustard	plastid	59.04	60.69
KRH42784	Soybean	nucleus	58.71	59.3
Zm00001d046357_P001	Maize	extracellular	40.41	51.38
Zm00001d044290_P005	Maize	golgi, vacuole	45.53	50.36
Zm00001d028474_P002	Maize	vacuole	48.04	49.11
Zm00001d048440_P003	Maize	vacuole	45.53	48.1
Zm00001d042654_P005	Maize	endoplasmic reticulum, golgi, vacuole	44.12	46.77
Zm00001d027803_P002	Maize	golgi, plasma membrane, vacuole	45.75	45.75
Zm00001d010212_P002	Maize	endoplasmic reticulum, extracellular, golgi	39.0	43.66
Zm00001d053585_P002	Maize	plastid	39.32	43.55
Zm00001d042656_P001	Maize	golgi, vacuole	32.57	42.59
Zm00001d043393_P001	Maize	extracellular	37.8	42.21
Zm00001d053225_P005	Maize	golgi, vacuole	35.73	38.77
Zm00001d032022_P003	Maize	golgi, vacuole	35.29	38.12
Zm00001d006243_P005	Maize	endoplasmic reticulum, golgi, vacuole	32.24	33.98
Zm00001d022621_P005	Maize	vacuole	31.59	32.44

Protein Annotations

KEGG:00052+3.2.1.23	KEGG:00511+3.2.1.23	KEGG:00531+3.2.1.23	KEGG:00600+3.2.1.23	KEGG:00604+3.2.1.23	EntrezGene:100274607
Gene3D:2.60.120.260	Gene3D:2.60.120.740	MapMan:21.3.2.2.2	Gene3D:3.20.20.80	UniProt:A0A1D6MYX1	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0004565	GO:GO:0005488	GO:GO:0005575	GO:GO:0005618
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0005774	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0009505	GO:GO:0016020	GO:GO:0016787	GO:GO:0016798
GO:GO:0030246	GO:GO:0030312	InterPro:Galactose-bd-like_sf	InterPro:Gly_Hdrlase_35_cat	InterPro:Glyco_hydro_35_CS	InterPro:Glycoside_Hdrlase_35
InterPro:Glycoside_hydrolase_SF	InterPro:IPR000922	InterPro:IPR008979	InterPro:Lectin_gal-bd_dom	ProteinID:ONM33886.1	ProteinID:ONM33889.1
PFAM:PF01301	PFAM:PF02140	PRINTS:PR00742	ScanProsite:PS01182	PFscan:PS50228	PANTHER:PTHR23421
PANTHER:PTHR23421:SF74	SUPFAM:SSF49785	SUPFAM:SSF51445	SignalP:SignalP-noTM	UniParc:UPI0002207BE7	EnsemblPlantsGene:Zm00001d041880
EnsemblPlants:Zm00001d041880_P001	EnsemblPlants:Zm00001d041880_T001	SEG:seg	:	:	:

Description

Beta-galactosidase 9

Coordinates

chr3:+:142132876..142197197

Molecular Weight (calculated)

101857.0 Da

IEP (calculated)

5.201

GRAVY (calculated)

-0.232

Length

918 amino acids

Sequence
(BLAST)

001: MTASPYPTTP WLRPPPPMAF LSLLLLLGCL SPSISLAGAE AAGVLRQVVG GDDGGTFFEP FNVTYDHRAL ILGGKRRMLV SAGLHYPRAT PEMWPSLIAK
101: CKEGGVDAIE TYVFWNGHEP AKGQYYFEGR FDIVRFAKLV AAEGLFLFLR IGPYACAEWN FGGFPVWLRD VPGIEFRTDN EPYKAEMQIF VTKIVDIMKE
201: EKLYSWQGGP IILQQIENEY GNIQGHYGQA GKRYMLWAAQ MALALDTGVP WVMCRQTDAP EQILNTCNAF YCDGFKPNSY NKPTIWTEDW DGWYADWGES
301: LPHRPAQDSA FAVARFYQRG GSLQNYYMYF GGTNFERTAG GPLQITSYDY DAPIDEYGIL RQPKWGHLKD LHAAIKLCES ALTAVDGSPH YVKLGPMQEA
401: HVYSSENVHT NGSISGNSQF CSAFLANIDE HKYASVWIFG KSYSLPPWSV SILPDCETVA FNTARVGTQT SFFNVESGSP SYSSRHKPRI LSLIGVPYLS
501: TTWWTFKEPV GIWGEGIFTA QGILEHLNVT KDISDYLSYT TRVNISEEDV LYWNSKGFLP SLTIDQIRDV ARVFVNGKLA GSKVGHWVSL NQPLQLVQGL
601: NELTLLSEIV GLQNYGAFLE KDGAGFRGQV KLTGLSNGDI DLTNSLWTYQ IGLKGEFSRI YSPEYQGSAE WSSMQNDDTV SPFTWFKTMF DAPEGNGPVT
701: IDLGSMGKGQ AWVNGHLIGR YWSLVAPESG CPSSCNYAGT YSDSKCRSNC GIATQSWYHI PREWLQESGN LLVLFEETGG DPSQISLEVH YTKTICSKIS
801: ETYYPPLSAW SRAANGRPSV NTVAPELRLQ CDDGHVISKI TFASYGTPTG GCQNFSVGNC HASTTLDLVV EACEGKNRCA ISVTNEVFGD PCRKVVKDLA
901: VEAECSPPSV NQEPRYDI

Best Arabidopsis Sequence Match ( AT2G32810.1 )
(BLAST)

001: MAESIRTFSL QWRILSLIIA LLVYFPILSG SYFKPFNVSY DHRALIIAGK RRMLVSAGIH YPRATPEMWS DLIAKSKEGG ADVVQTYVFW NGHEPVKGQY
101: NFEGRYDLVK FVKLIGSSGL YLHLRIGPYV CAEWNFGGFP VWLRDIPGIE FRTDNEPFKK EMQKFVTKIV DLMREAKLFC WQGGPIIMLQ IENEYGDVEK
201: SYGQKGKDYV KWAASMALGL GAGVPWVMCK QTDAPENIID ACNGYYCDGF KPNSRTKPVL WTEDWDGWYT KWGGSLPHRP AEDLAFAVAR FYQRGGSFQN
301: YYMYFGGTNF GRTSGGPFYI TSYDYDAPLD EYGLRSEPKW GHLKDLHAAI KLCEPALVAA DAPQYRKLGS KQEAHIYHGD GETGGKVCAA FLANIDEHKS
401: AHVKFNGQSY TLPPWSVSIL PDCRHVAFNT AKVGAQTSVK TVESARPSLG SMSILQKVVR QDNVSYISKS WMALKEPIGI WGENNFTFQG LLEHLNVTKD
501: RSDYLWHKTR ISVSEDDISF WKKNGPNSTV SIDSMRDVLR VFVNKQLAGS IVGHWVKAVQ PVRFIQGNND LLLLTQTVGL QNYGAFLEKD GAGFRGKAKL
601: TGFKNGDLDL SKSSWTYQVG LKGEADKIYT VEHNEKAEWS TLETDASPSI FMWYKTYFDP PAGTDPVVLN LESMGRGQAW VNGQHIGRYW NIISQKDGCD
701: RTCDYRGAYN SDKCTTNCGK PTQTRYHVPR SWLKPSSNLL VLFEETGGNP FKISVKTVTA GILCGQVSES HYPPLRKWST PDYINGTMSI NSVAPEVHLH
801: CEDGHVISSI EFASYGTPRG SCDGFSIGKC HASNSLSIVS EACKGRNSCF IEVSNTAFIS DPCSGTLKTL AVMSRCSPSQ NMSDLSF

Arabidopsis Description

BGAL9Beta-galactosidase 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCV3]
SUBAcon: [golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.