Factsheet for Zm00001d010212_P002

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi, extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, golgi
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG22057	Sorghum	vacuole	91.71	89.95
TraesCS1A01G267700.1	Wheat	endoplasmic reticulum, extracellular, vacuole	78.54	78.16
TraesCS1D01G267600.2	Wheat	endoplasmic reticulum, extracellular, vacuole	78.05	78.05
TraesCS1B01G278400.1	Wheat	plastid	78.17	77.79
HORVU1Hr1G065290.7	Barley	vacuole	77.93	77.74
Os05t0428100-00	Rice	golgi, vacuole	76.22	77.07
Zm00001d042656_P001	Maize	golgi, vacuole	56.22	65.67
VIT_07s0031g02590.t01	Wine grape	extracellular, golgi, vacuole	34.88	62.04
GSMUA_Achr11P...	Banana	golgi, vacuole	58.41	58.63
KRH40964	Soybean	golgi, vacuole	49.88	58.1
Solyc11g018500.1.1	Tomato	cytosol, golgi, vacuole	48.66	57.41
KRH53958	Soybean	golgi, vacuole	49.88	57.04
KRH63978	Soybean	golgi, vacuole	49.88	57.04
KRH53267	Soybean	golgi, vacuole	46.95	55.24
VIT_18s0001g02220.t01	Wine grape	vacuole	54.76	55.23
KRH64633	Soybean	vacuole	46.83	55.17
PGSC0003DMT400023852	Potato	extracellular	42.32	55.17
Solyc11g018490.1.1	Tomato	cytosol	50.49	54.83
AT5G63800.1	Thale cress	vacuole	47.93	54.74
Bra029200.1-P	Field mustard	vacuole	48.05	54.72
PGSC0003DMT400023851	Potato	nucleus, peroxisome, vacuole	48.29	54.7
CDY39845	Canola	vacuole	47.8	54.44
VIT_18s0001g02230.t01	Wine grape	golgi, vacuole	54.27	54.2
Bra024237.1-P	Field mustard	vacuole	33.05	54.09
CDX84445	Canola	vacuole	46.95	53.47
CDY31349	Canola	vacuole	48.05	53.17
AT1G77410.3	Thale cress	golgi, vacuole	53.05	53.05
CDY43756	Canola	cytosol, nucleus, peroxisome	31.59	50.78
Zm00001d044290_P005	Maize	golgi, vacuole	44.27	43.73
Zm00001d046357_P001	Maize	extracellular	37.68	42.8
Zm00001d053225_P005	Maize	golgi, vacuole	43.54	42.2
Zm00001d048440_P003	Maize	vacuole	44.15	41.66
Zm00001d032022_P003	Maize	golgi, vacuole	42.93	41.41
Zm00001d028474_P002	Maize	vacuole	44.02	40.2
Zm00001d027803_P002	Maize	golgi, plasma membrane, vacuole	44.27	39.54
Zm00001d041880_P001	Maize	extracellular, plasma membrane	43.66	39.0
Zm00001d042654_P005	Maize	endoplasmic reticulum, golgi, vacuole	40.85	38.68
Zm00001d053585_P002	Maize	plastid	38.17	37.76
Zm00001d043393_P001	Maize	extracellular	37.44	37.35
Zm00001d006243_P005	Maize	endoplasmic reticulum, golgi, vacuole	39.27	36.97
Zm00001d022621_P005	Maize	vacuole	38.54	35.35

Protein Annotations

KEGG:00052+3.2.1.23	KEGG:00511+3.2.1.23	KEGG:00531+3.2.1.23	KEGG:00600+3.2.1.23	KEGG:00604+3.2.1.23	EntrezGene:103635629
Gene3D:2.60.120.260	Gene3D:2.60.120.740	MapMan:21.3.2.2.2	Gene3D:3.20.20.80	UniProt:A0A1D6FPT2	ProteinID:AQK93634.1
InterPro:BetaGal_jelly_roll_dom	ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0004565
GO:GO:0005488	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0016798
GO:GO:0030246	InterPro:Galactose-bd-like_sf	InterPro:Gly_Hdrlase_35_cat	InterPro:Glyco_hydro_35_CS	InterPro:Glycoside_Hdrlase_35	InterPro:Glycoside_hydrolase_SF
InterPro:IPR000922	InterPro:IPR008979	InterPro:Lectin_gal-bd_dom	PFAM:PF01301	PFAM:PF02140	PFAM:PF13364
PRINTS:PR00742	ScanProsite:PS01182	PFscan:PS50228	PANTHER:PTHR23421	PANTHER:PTHR23421:SF118	SUPFAM:SSF49785
SUPFAM:SSF51445	SignalP:SignalP-noTM	UniParc:UPI0004DEC760	EnsemblPlantsGene:Zm00001d010212	EnsemblPlants:Zm00001d010212_P002	EnsemblPlants:Zm00001d010212_T002
SEG:seg	:	:	:	:	:

Description

Beta-galactosidase

Coordinates

chr8:+:104219167..104225767

Molecular Weight (calculated)

91628.4 Da

IEP (calculated)

5.793

GRAVY (calculated)

-0.261

Length

820 amino acids

Sequence
(BLAST)

001: MAAAEIVVVA VVTLLLGLTS CMAESSVWRE EDRRVRGEVT YEQRALVLDG ARRMLFAGEM HYPRSTPEMW PKLIAKAKEG GLDVIQTYVF WNVHEPIQGQ
101: YNFEGRYDLV RFIKEIQAQG LYVSLRIGPF IESEWKYGGF PFWLHDVPNI TFRSDNEPFK QHMQRFVTDI VNMMKHEGLY YPQGGPIITS QIENEYQMVE
201: PAFGSSGQRY VSWAAAMAVD LQTGVPWTMC KQNDAPDPVI NTCNGLICGE TFVGPNSANK PALWTENWTS RYLIYGNDTK LRSPQDITFA VALFIARKNG
301: SYVSYYMYHG GTNFGRFASS YVTTSYYDGA PLDEYGLIWQ PTWGHLRELH AAVKQSSEPL LFGTYSNLSI GQEQEAHIFE TETQCVAFLV NFDQHHISEV
401: VFRNISLELA PKSISILLDC KQVVFETAKV NAQHGSRTAE EVQSFSDIST WKAFKEPIPQ DVSKSAYSGN RLFEHLSTTK DATDYLWYIV GYEYTPSDDG
501: QLVLINVESR AHILHAFVNN AYVGRIHGSH GGPANIIFST NISLQEGPNT ISLLSAMVGS PDSGAHMERR VFGIRKVSIQ QGQEPENLLN NELWGYQVGL
601: FGERNNIYTQ DSKITEWTTI DNLTYSPLTW YKTTFSTPVG NDAVTLNLTG MGKGEVWVNG ESIGRYWVSF KAPSGNPSQS LYHIPREFLN PQDNTLVLFE
701: EMGGNPQLIT VNTMSVSRVC GNVNELSAPS LQYKDKEPAV DLWCPEGKHI SAIEFASYGG PTGDCKKFGF GRCHAGSSES VVKQACLGKS GCSVPVTPIK
801: FGGDPCPGIQ KSLLVVANYR

Best Arabidopsis Sequence Match ( AT1G77410.1 )
(BLAST)

001: MTTFQYSLVF LVLMAVIVAG DVANVTYDGR SLIIDGEHKI LFSGSIHYTR STPQMWPSLI AKAKSGGIDV VDTYVFWNVH EPQQGQFDFS GSRDIVKFIK
101: EVKNHGLYVC LRIGPFIQGE WSYGGLPFWL HNVQGIVFRT DNEPFKYHMK RYAKMIVKLM KSENLYASQG GPIILSQIEN EYGMVGRAFR QEGKSYVKWT
201: AKLAVELDTG VPWVMCKQDD APDPLVNACN GRQCGETFKG PNSPNKPAIW TENWTSFYQT YGEEPLIRSA EDIAFHVALF IAKNGSFVNY YMYHGGTNFG
301: RNASQFVITS YYDQAPLDEY GLLRQPKWGH LKELHAAVKL CEEPLLSGLQ TTISLGKLQT AFVFGKKANL CAAILVNQDK CESTVQFRNS SYRLSPKSVS
401: VLPDCKNVAF NTAKVNAQYN TRTRKARQNL SSPQMWEEFT ETVPSFSETS IRSESLLEHM NTTQDTSDYL WQTTRFQQSE GAPSVLKVNH LGHALHAFVN
501: GRFIGSMHGT FKAHRFLLEK NMSLNNGTNN LALLSVMVGL PNSGAHLERR VVGSRSVKIW NGRYQLYFNN YSWGYQVGLK GEKFHVYTED GSAKVQWKQY
601: RDSKSQPLTW YKASFDTPEG EDPVALNLGS MGKGEAWVNG QSIGRYWVSF HTYKGNPSQI WYHIPRSFLK PNSNLLVILE EEREGNPLGI TIDTVSVTEV
701: CGHVSNTNPH PVISPRKKGL NRKNLTYRYD RKPKVQLQCP TGRKISKILF ASFGTPNGSC GSYSIGSCHS PNSLAVVQKA CLKKSRCSVP VWSKTFGGDS
801: CPHTVKSLLV RAQCS

Arabidopsis Description

BGAL16beta-galactosidase 16 [Source:TAIR;Acc:AT1G77410]
SUBAcon: [golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.