Factsheet for Zm00001d006243_P005

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi, vacuole

Predictor Summary:

extracellular 4
endoplasmic reticulum 5
vacuole 5
plasma membrane 4
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi, vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG36088	Sorghum	endoplasmic reticulum, golgi, vacuole	84.62	88.05
Zm00001d022621_P005	Maize	vacuole	81.06	78.97
Os09t0539200-01	Rice	vacuole	36.85	71.97
TraesCS5A01G330900.1	Wheat	endoplasmic reticulum, vacuole	69.0	71.63
TraesCS5B01G331300.1	Wheat	golgi, vacuole	68.43	71.04
HORVU7Hr1G009630.2	Barley	cytosol	54.88	69.38
TraesCS5D01G336700.2	Wheat	vacuole	64.75	67.22
Zm00001d053225_P005	Maize	golgi, vacuole	55.34	56.97
Zm00001d032022_P003	Maize	golgi, vacuole	54.99	56.35
GSMUA_Achr1P26480_001	Banana	vacuole	48.45	51.91
GSMUA_Achr1P14790_001	Banana	vacuole	48.56	51.27
GSMUA_AchrUn_...	Banana	extracellular, vacuole	47.99	51.23
GSMUA_Achr4P05130_001	Banana	golgi, plastid, vacuole	47.3	49.11
VIT_03s0038g02360.t01	Wine grape	extracellular, golgi	46.5	48.62
KRH24309	Soybean	golgi, vacuole	45.01	46.5
CDX75479	Canola	vacuole	45.01	46.39
Bra011577.1-P	Field mustard	vacuole	45.01	46.39
PGSC0003DMT400015841	Potato	endoplasmic reticulum, golgi, vacuole	42.94	46.23
CDX69103	Canola	vacuole	44.66	46.09
Solyc01g111540.2.1	Tomato	unclear	43.97	46.09
Bra001991.1-P	Field mustard	golgi, vacuole	42.94	46.06
AT4G35010.1	Thale cress	vacuole	44.66	46.04
CDY31414	Canola	cytosol, golgi, mitochondrion, peroxisome	41.22	46.03
KRH29286	Soybean	extracellular, golgi, vacuole	44.43	45.96
Solyc10g055470.1.1	Tomato	vacuole	43.74	45.96
Bra013052.1-P	Field mustard	golgi, vacuole	44.55	45.86
AT2G16730.1	Thale cress	extracellular, golgi, vacuole	44.32	45.52
CDY40650	Canola	vacuole	44.09	45.5
Bra017687.1-P	Field mustard	vacuole	44.09	45.5
CDX72512	Canola	vacuole	43.97	45.38
PGSC0003DMT400031178	Potato	vacuole	43.17	45.36
KRH60700	Soybean	extracellular, golgi, vacuole	43.74	45.14
CDX72747	Canola	vacuole	43.74	43.0
CDY70118	Canola	cytosol	29.16	42.76
CDY22419	Canola	cytosol	44.2	40.27
Bra033571.1-P	Field mustard	cytosol	44.2	40.27
Zm00001d010212_P002	Maize	endoplasmic reticulum, extracellular, golgi	36.97	39.27
CDY02241	Canola	golgi, vacuole	44.55	39.23
Zm00001d043393_P001	Maize	extracellular	36.05	38.2
Zm00001d042656_P001	Maize	golgi, vacuole	30.77	38.18
Zm00001d044290_P005	Maize	golgi, vacuole	35.48	37.23
Zm00001d046357_P001	Maize	extracellular	30.2	36.43
CDX89744	Canola	vacuole	44.66	35.82
Zm00001d042654_P005	Maize	endoplasmic reticulum, golgi, vacuole	35.36	35.57
AT4G38590.2	Thale cress	golgi, vacuole	42.71	35.36
Zm00001d048440_P003	Maize	vacuole	34.9	34.98
Zm00001d028474_P002	Maize	vacuole	35.36	34.3
Zm00001d027803_P002	Maize	golgi, plasma membrane, vacuole	35.25	33.44
Zm00001d053585_P002	Maize	plastid	31.0	32.57
Zm00001d041880_P001	Maize	extracellular, plasma membrane	33.98	32.24

Protein Annotations

KEGG:00052+3.2.1.23	KEGG:00511+3.2.1.23	KEGG:00531+3.2.1.23	KEGG:00600+3.2.1.23	KEGG:00604+3.2.1.23	EntrezGene:100383352
Gene3D:2.60.120.260	Gene3D:2.60.120.740	MapMan:21.3.2.2.2	Gene3D:3.20.20.80	UniProt:A0A1D6EU33	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0004565	GO:GO:0005488	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0016787	GO:GO:0016798	GO:GO:0030246	InterPro:Galactose-bd-like_sf	InterPro:Gly_Hdrlase_35_cat
InterPro:Glyco_hydro_35_CS	InterPro:Glycoside_Hdrlase_35	InterPro:Glycoside_hydrolase_SF	InterPro:IPR000922	InterPro:IPR008979	InterPro:Lectin_gal-bd_dom
ProteinID:ONM23186.1	PFAM:PF01301	PFAM:PF02140	PRINTS:PR00742	ScanProsite:PS01182	PFscan:PS50228
PANTHER:PTHR23421	PANTHER:PTHR23421:SF76	SUPFAM:SSF49785	SUPFAM:SSF51445	SignalP:SignalP-noTM	TMHMM:TMhelix
UniParc:UPI000842C927	EnsemblPlantsGene:Zm00001d006243	EnsemblPlants:Zm00001d006243_P005	EnsemblPlants:Zm00001d006243_T005	SEG:seg	:

Description

Beta-galactosidase 11

Coordinates

chr2:+:202663871..202670238

Molecular Weight (calculated)

98091.1 Da

IEP (calculated)

6.856

GRAVY (calculated)

-0.385

Length

871 amino acids

Sequence
(BLAST)

001: MTVRAAAVLV ATAALALLLP GWAAAEWSLT KKGSVVTYDG RSLMIDGKRD LFFSGAIHYP RSPPEMWPKL IERAKEGGLN TIETYIFWNA HEPEPGKYNF
101: EGRFDLIKYL KMIQEHDMYA IVRIGPFIQA EWNHGGLPYW LREIDHIIFR ANNDPYKKEM EKFVRFIVQK LKDAELFASQ GGPIILTQIE NEYGNIKKDH
201: ATDGDKYLEW AAQMALSTQT GVPWIMCKQS SAPGEVIPTC NGRHCGDTWT LRDKNKPMLW TENWTQQFRA YGDQVAMRSA EDIAYAVLRF FAKGGSLVNY
301: YMYHGGTNFG RTGASYVLTG YYDEAPMDEY GMYKEPKFGH LRDLHNVIRS YQKAFLWGQH SSEILGHGYE VGNNFFNHFG FWKLILLFDS VLRPSNESSL
401: VFVQHSERSF HTSDVTSKNN QWEMFSETIP KYRDTKVRTK EPLEQYNQTK DDTDYLWYTT SFRLESDDLP FRNDIRPVLQ VKSSAHAMMG FANDAFVGNL
501: DQLCNNLVPP KTLACCMNAS KAIVQIKIPL HVGCARGNKQ VKGFMFEKPV DLKVGVNHVV LLSSTMGMKV KICRNCGMCL ECKKTDNTVL SDSQDSGGEL
601: AEVKGGIQEC LIQGLNTGTL DLQVNGWGHK AALEGEYKEI YSEKGLGKVQ WKPAENDRAA TWYKRYFDEP DGDDPVVLDM SSMSKGMIFV NGEGVGRYWV
701: SYRTLAGTPS QAVYHIPRPF LKSKDNLLVI FEEEMGKPDG ILVQTVTRDD ICLFISEHNP GQIKTWDTDG DKIKLIAEDH SRRGTLTCPP EKTIQEVVFA
801: SFGNPDGMCG NFTVGTCHTP NAKQIVEKEC LGKPSCMLPV DHTVYGADIN CQSTTATLGV QVRCGGGKKG A

Best Arabidopsis Sequence Match ( AT1G77410.1 )
(BLAST)

001: MTTFQYSLVF LVLMAVIVAG DVANVTYDGR SLIIDGEHKI LFSGSIHYTR STPQMWPSLI AKAKSGGIDV VDTYVFWNVH EPQQGQFDFS GSRDIVKFIK
101: EVKNHGLYVC LRIGPFIQGE WSYGGLPFWL HNVQGIVFRT DNEPFKYHMK RYAKMIVKLM KSENLYASQG GPIILSQIEN EYGMVGRAFR QEGKSYVKWT
201: AKLAVELDTG VPWVMCKQDD APDPLVNACN GRQCGETFKG PNSPNKPAIW TENWTSFYQT YGEEPLIRSA EDIAFHVALF IAKNGSFVNY YMYHGGTNFG
301: RNASQFVITS YYDQAPLDEY GLLRQPKWGH LKELHAAVKL CEEPLLSGLQ TTISLGKLQT AFVFGKKANL CAAILVNQDK CESTVQFRNS SYRLSPKSVS
401: VLPDCKNVAF NTAKVNAQYN TRTRKARQNL SSPQMWEEFT ETVPSFSETS IRSESLLEHM NTTQDTSDYL WQTTRFQQSE GAPSVLKVNH LGHALHAFVN
501: GRFIGSMHGT FKAHRFLLEK NMSLNNGTNN LALLSVMVGL PNSGAHLERR VVGSRSVKIW NGRYQLYFNN YSWGYQVGLK GEKFHVYTED GSAKVQWKQY
601: RDSKSQPLTW YKASFDTPEG EDPVALNLGS MGKGEAWVNG QSIGRYWVSF HTYKGNPSQI WYHIPRSFLK PNSNLLVILE EEREGNPLGI TIDTVSVTEV
701: CGHVSNTNPH PVISPRKKGL NRKNLTYRYD RKPKVQLQCP TGRKISKILF ASFGTPNGSC GSYSIGSCHS PNSLAVVQKA CLKKSRCSVP VWSKTFGGDS
801: CPHTVKSLLV RAQCS

Arabidopsis Description

BGAL16beta-galactosidase 16 [Source:TAIR;Acc:AT1G77410]
SUBAcon: [golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.