Factsheet for GSMUA_Achr4P05130_001

Subcellular Localization

min:

: max

Winner_takes_all: golgi, plastid, vacuole

Predictor Summary:

nucleus 1
golgi 2
plastid 2
vacuole 1
extracellular 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	extracellular, vacuole	71.04	73.04
GSMUA_Achr1P14790_001	Banana	vacuole	68.18	69.33
GSMUA_Achr1P26480_001	Banana	vacuole	66.63	68.76
VIT_03s0038g02360.t01	Wine grape	extracellular, golgi	58.16	58.58
HORVU7Hr1G057460.1	Barley	golgi	56.85	57.33
Os08t0549200-01	Rice	plasma membrane	57.57	56.96
Solyc01g111540.2.1	Tomato	unclear	55.66	56.2
TraesCS7D01G272600.1	Wheat	golgi, vacuole	55.78	55.71
PGSC0003DMT400015841	Potato	endoplasmic reticulum, golgi, vacuole	53.28	55.25
Zm00001d053225_P005	Maize	golgi, vacuole	55.42	54.96
PGSC0003DMT400031178	Potato	vacuole	54.23	54.89
KXG25431	Sorghum	golgi	55.07	54.48
Solyc10g055470.1.1	Tomato	vacuole	53.75	54.4
TraesCS7A01G272400.2	Wheat	vacuole	55.18	54.28
Zm00001d032022_P003	Maize	golgi, vacuole	54.59	53.88
TraesCS7B01G169700.1	Wheat	vacuole	55.3	53.27
KRH29286	Soybean	extracellular, golgi, vacuole	53.28	53.09
KRH24309	Soybean	golgi, vacuole	52.92	52.67
Os09t0539200-01	Rice	vacuole	27.89	52.47
AT2G16730.1	Thale cress	extracellular, golgi, vacuole	52.32	51.77
KRH60700	Soybean	extracellular, golgi, vacuole	51.85	51.54
KXG36088	Sorghum	endoplasmic reticulum, golgi, vacuole	51.37	51.49
TraesCS5B01G331300.1	Wheat	golgi, vacuole	51.37	51.37
Bra013052.1-P	Field mustard	golgi, vacuole	51.73	51.3
CDY31414	Canola	cytosol, golgi, mitochondrion, peroxisome	47.32	50.9
TraesCS5A01G330900.1	Wheat	endoplasmic reticulum, vacuole	50.77	50.77
Bra001991.1-P	Field mustard	golgi, vacuole	49.11	50.74
Bra011577.1-P	Field mustard	vacuole	51.01	50.65
CDX69103	Canola	vacuole	50.89	50.59
AT4G35010.1	Thale cress	vacuole	50.89	50.53
CDX75479	Canola	vacuole	50.89	50.53
CDY40650	Canola	vacuole	50.66	50.36
Bra017687.1-P	Field mustard	vacuole	50.66	50.36
CDX72512	Canola	vacuole	50.54	50.24
HORVU7Hr1G009630.2	Barley	cytosol	40.64	49.49
TraesCS5D01G336700.2	Wheat	vacuole	48.87	48.87
CDY70118	Canola	cytosol	33.73	47.64
Zm00001d006243_P005	Maize	endoplasmic reticulum, golgi, vacuole	49.11	47.3
GSMUA_Achr7P08970_001	Banana	vacuole	40.76	46.85
GSMUA_Achr11P...	Banana	golgi, vacuole	45.41	46.63
CDX72747	Canola	vacuole	49.23	46.61
GSMUA_Achr6P00880_001	Banana	golgi, vacuole	40.64	46.46
GSMUA_Achr7P08940_001	Banana	vacuole	40.52	46.45
GSMUA_Achr7P08950_001	Banana	golgi, vacuole	40.41	46.06
GSMUA_Achr7P08960_001	Banana	endoplasmic reticulum, golgi, vacuole	40.41	46.06
Zm00001d022621_P005	Maize	vacuole	48.15	45.19
GSMUA_Achr6P35850_001	Banana	golgi, vacuole	43.86	44.66
CDY02241	Canola	golgi, vacuole	51.73	43.88
GSMUA_Achr9P21610_001	Banana	extracellular, golgi	44.34	43.61
GSMUA_Achr4P13580_001	Banana	golgi, vacuole	44.93	43.43
Bra033571.1-P	Field mustard	cytosol	49.46	43.41
CDY22419	Canola	cytosol	49.46	43.41
GSMUA_Achr4P20830_001	Banana	golgi, vacuole	43.98	42.37
GSMUA_Achr4P22060_001	Banana	golgi, vacuole	42.31	42.26
GSMUA_Achr6P18730_001	Banana	golgi, vacuole	38.02	41.97
GSMUA_Achr2P16780_001	Banana	plastid	40.76	40.67
GSMUA_Achr4P25980_001	Banana	extracellular, golgi, vacuole	29.8	40.39
GSMUA_Achr5P11870_001	Banana	extracellular, golgi	37.78	40.38
GSMUA_Achr4P26030_001	Banana	cytosol, peroxisome, vacuole	25.51	40.38
GSMUA_Achr4P06620_001	Banana	cytosol	30.87	40.22
CDX89744	Canola	vacuole	51.25	39.59
GSMUA_Achr2P21230_001	Banana	extracellular, golgi, vacuole	41.24	39.41
AT4G38590.2	Thale cress	golgi, vacuole	48.51	38.69
GSMUA_Achr2P21790_001	Banana	golgi, vacuole	38.62	38.53
GSMUA_Achr5P11850_001	Banana	extracellular, golgi	38.02	35.52

Protein Annotations

KEGG:00052+3.2.1.23	KEGG:00511+3.2.1.23	KEGG:00531+3.2.1.23	KEGG:00600+3.2.1.23	KEGG:00604+3.2.1.23	Gene3D:2.60.120.260
Gene3D:2.60.120.740	MapMan:21.3.2.2.2	Gene3D:3.20.20.80	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0004565	GO:GO:0005488	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
GO:GO:0016798	GO:GO:0030246	EnsemblPlantsGene:GSMUA_Achr4G05130_001	EnsemblPlants:GSMUA_Achr4P05130_001	EnsemblPlants:GSMUA_Achr4T05130_001	InterPro:Galactose-bd-like_sf
InterPro:Gly_Hdrlase_35_cat	InterPro:Glyco_hydro_35_CS	InterPro:Glycoside_Hdrlase_35	InterPro:Glycoside_hydrolase_SF	InterPro:IPR000922	InterPro:IPR008979
InterPro:Lectin_gal-bd_dom	UniProt:M0SL80	PFAM:PF01301	PFAM:PF02140	PRINTS:PR00742	ScanProsite:PS01182
PFscan:PS50228	PANTHER:PTHR23421	PANTHER:PTHR23421:SF52	SUPFAM:SSF49785	SUPFAM:SSF51445	SignalP:SignalP-noTM
UniParc:UPI0002954368	:	:	:	:	:

Description

Beta-galactosidase 11 [Source:GMGC_GENE;Acc:GSMUA_Achr4G05130_001]

Coordinates

chr4:-:3974978..3979137

Molecular Weight (calculated)

93779.9 Da

IEP (calculated)

9.114

GRAVY (calculated)

-0.319

Length

839 amino acids

Sequence
(BLAST)

001: MVVSPETIAR SSIRTLFLLT LLVSDVAGRK GGTSQGVTYD RRSLIINGRR ELLFSGSVHY PRSTPEMWPE IIASAKHGGL NVIQTYVFWN LHEPVQGQYN
101: FQGKYDVVRF IKLIEKKGMY ATLRIGPYIE AEWNYGGFPY WLKEVQNISF RTDNPPFKYH MKRFVEKVVS LMKDEKLFAS QGGPIILSQV ENEYNNVAHA
201: YKDAGLRYVR WAGNMAVDLK TGVPWVMCKE KSAPGPVINA CNGRNCGDTF EVPNNSTKPF LWTENWTAQY RVFGDPPSQR SAEDLAYSVA RFFSKNGTLV
301: NYYMYHGGTN FGRSGSSFAM TRYYDEAPLD EFGLHKEPKY GHLSDLHHAL RLCSKALLWG VSSVQTFDID GFEATVYENP GMKACAAFLS NSNRKIEGTV
401: NFKGTDYYLP RRSISILPDC KTVAFNTQKH NARTFHVAKE SSMNNQWQMH KDHIPRFRDT RVRSRSTLEL FNMTKDTSDY LWYTTSFRLE DDDLPRRHDI
501: RPVLLVSNLG HAMHAFVNGR HAGSGHGTNI EKSFVFHQPI ALGAGINHVT ILCMTIGLPN SGSYLEHRIA GVHTVVIQGL NTGTLDLSQN GWGHQVGLVG
601: EKLGIFNEKG VNNVNWTQAQ NDMPITWYKR YFDAPSGNDP VALDLTSMSK GMVWINGESI GRYWVSYLNP LQKPSQSVYH VPRSLLKPKD NLMVVFEEHR
701: GKPEGIVMMT VKRDNICTFV SELFPGQASS SLRESSKLGT VEHPEARLKC TGKKVIHSIA FASFGNPEGL CGNYSRGSCH APQTKAVVEK ACLGKKSCAL
801: SMSYEAYGAD INCVGTTGTL AVHAICALGS ALQVTSAIG

Best Arabidopsis Sequence Match ( AT2G16730.1 )
(BLAST)

001: MKIHSSDHSW LLLAVLVILL SFSGALSSDD KEKKTKSVDK KKEVTYDGTS LIINGNRELL YSGSIHYPRS TPEMWPNIIK RAKQGGLNTI QTYVFWNVHE
101: PEQGKFNFSG RADLVKFIKL IEKNGLYVTL RLGPFIQAEW THGGLPYWLR EVPGIFFRTD NEPFKEHTER YVKVVLDMMK EEKLFASQGG PIILGQIENE
201: YSAVQRAYKE DGLNYIKWAS KLVHSMDLGI PWVMCKQNDA PDPMINACNG RHCGDTFPGP NKDNKPSLWT ENWTTQFRVF GDPPAQRSVE DIAYSVARFF
301: SKNGTHVNYY MYHGGTNFGR TSAHYVTTRY YDDAPLDEFG LEREPKYGHL KHLHNALNLC KKALLWGQPR VEKPSNETEI RYYEQPGTKV CAAFLANNNT
401: EAAEKIKFRG KEYLIPHRSI SILPDCKTVV YNTGEIISHH TSRNFMKSKK ANKNFDFKVF TESVPSKIKG DSFIPVELYG LTKDESDYGW YTTSFKIDDN
501: DLSKKKGGKP NLRIASLGHA LHVWLNGEYL GNGHGSHEEK SFVFQKPVTL KEGENHLTML GVLTGFPDSG SYMEHRYTGP RSVSILGLGS GTLDLTEENK
601: WGNKVGMEGE RLGIHAEEGL KKVKWEKASG KEPGMTWYQT YFDAPESQSA AAIRMNGMGK GLIWVNGEGV GRYWMSFLSP LGQPTQIEYH IPRSFLKPKK
701: NLLVIFEEEP NVKPELIDFV IVNRDTVCSY IGENYTPSVR HWTRKNDQVQ AITDDVHLTA NLKCSGTKKI SAVEFASFGN PNGTCGNFTL GSCNAPVSKK
801: VVEKYCLGKA ECVIPVNKST FEQDKKDSCP KVEKKLAVQV KCGRDKKN

Arabidopsis Description

BGAL13Beta-galactosidase 13 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCU9]
SUBAcon: [golgi,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.