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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, golgi, vacuole

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 6
  • vacuole 6
  • plasma membrane 5
  • golgi 6
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, golgi, vacuole
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d006243_P005 Maize endoplasmic reticulum, golgi, vacuole 88.05 84.62
Zm00001d022621_P005 Maize vacuole 87.57 81.99
Os09t0539200-01 Rice vacuole 42.29 79.37
TraesCS5A01G330900.1 Wheat endoplasmic reticulum, vacuole 75.51 75.33
TraesCS5B01G331300.1 Wheat golgi, vacuole 74.91 74.73
HORVU7Hr1G009630.2 Barley cytosol 60.93 74.02
TraesCS5D01G336700.2 Wheat vacuole 71.33 71.16
KXG25431 Sorghum golgi 59.86 59.08
GSMUA_Achr1P26480_001 Banana vacuole 52.57 54.12
GSMUA_AchrUn_... Banana extracellular, vacuole 52.09 53.43
GSMUA_Achr1P14790_001 Banana vacuole 52.21 52.97
GSMUA_Achr4P05130_001 Banana golgi, plastid, vacuole 51.49 51.37
VIT_03s0038g02360.t01 Wine grape extracellular, golgi 50.42 50.66
KRH24309 Soybean golgi, vacuole 49.46 49.11
PGSC0003DMT400015841 Potato endoplasmic reticulum, golgi, vacuole 47.43 49.07
Solyc01g111540.2.1 Tomato unclear 48.51 48.86
KRH29286 Soybean extracellular, golgi, vacuole 49.1 48.81
Solyc10g055470.1.1 Tomato vacuole 48.27 48.73
PGSC0003DMT400031178 Potato vacuole 48.03 48.49
CDX75479 Canola vacuole 48.39 47.93
Bra011577.1-P Field mustard vacuole 48.27 47.81
CDX69103 Canola vacuole 48.15 47.75
Bra001991.1-P Field mustard golgi, vacuole 46.12 47.54
CDY31414 Canola cytosol, golgi, mitochondrion, peroxisome 44.09 47.31
KRH60700 Soybean extracellular, golgi, vacuole 47.67 47.27
AT4G35010.1 Thale cress vacuole 47.67 47.22
AT2G16730.1 Thale cress extracellular, golgi, vacuole 47.79 47.17
Bra013052.1-P Field mustard golgi, vacuole 47.43 46.93
CDY40650 Canola vacuole 47.31 46.92
Bra017687.1-P Field mustard vacuole 47.31 46.92
CDX72512 Canola vacuole 47.07 46.68
CDX72747 Canola vacuole 47.91 45.26
CDY70118 Canola cytosol 32.02 45.12
Bra033571.1-P Field mustard cytosol 48.39 42.36
CDY22419 Canola cytosol 48.39 42.36
KXG22057 Sorghum vacuole 40.86 40.91
CDY02241 Canola golgi, vacuole 47.43 40.14
EES03081 Sorghum extracellular 39.55 39.88
EES01845 Sorghum endoplasmic reticulum, golgi, vacuole 40.14 39.86
OQU87043 Sorghum golgi, vacuole 39.07 39.54
EES06516 Sorghum mitochondrion, plastid 34.89 39.46
EER92805 Sorghum vacuole 39.07 38.84
EER88554 Sorghum golgi, vacuole 33.57 38.76
EER92534 Sorghum endoplasmic reticulum, golgi 39.43 38.37
CDX89744 Canola vacuole 47.79 36.83
AT4G38590.2 Thale cress golgi, vacuole 46.12 36.69
EES16726 Sorghum extracellular 37.4 33.91
Protein Annotations
KEGG:00052+3.2.1.23KEGG:00511+3.2.1.23KEGG:00531+3.2.1.23KEGG:00600+3.2.1.23KEGG:00604+3.2.1.23Gene3D:2.60.120.260
Gene3D:2.60.120.740MapMan:21.3.2.2.2Gene3D:3.20.20.80UniProt:A0A1B6QDU8GO:GO:0003674GO:GO:0003824
GO:GO:0004553GO:GO:0004565GO:GO:0005488GO:GO:0005975GO:GO:0008150GO:GO:0008152
GO:GO:0016787GO:GO:0016798GO:GO:0030246InterPro:Galactose-bd-like_sfInterPro:Gly_Hdrlase_35_catInterPro:Glyco_hydro_35_CS
InterPro:Glycoside_Hdrlase_35InterPro:Glycoside_hydrolase_SFInterPro:IPR000922InterPro:IPR008979EnsemblPlants:KXG36088ProteinID:KXG36088
ProteinID:KXG36088.1InterPro:Lectin_gal-bd_domPFAM:PF01301PFAM:PF02140PRINTS:PR00742ScanProsite:PS01182
PFscan:PS50228PANTHER:PTHR23421PANTHER:PTHR23421:SF76MetaCyc:PWY-6807EnsemblPlantsGene:SORBI_3002G279900SUPFAM:SSF49785
SUPFAM:SSF51445SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI00081ABE1ASEG:seg:
Description
hypothetical protein
Coordinates
chr2:+:66153612..66159558
Molecular Weight (calculated)
94015.2 Da
IEP (calculated)
6.925
GRAVY (calculated)
-0.398
Length
837 amino acids
Sequence
(BLAST)
001: MTVRAAAVLV AAAALALLLP GWAAAEWTLT KKGSVVTYDA RSLLIDGKRD LFFSGAIHYP RSPPEVWPKL LDRAKEGGLN TIETYIFWNA HEPEPGKYNF
101: EGRLDLVKFL KMIQEHGMYA IVRIGPFIQA EWNHGGLPYW LREIDHIIFR ANNDPYKKEM EKWTRFVVQK LKDAELFASQ GGPVILTQIE NEYGNIKKDH
201: KIEGDKYLEW AAQMALSTQT GVPWIMCKQS SAPGEVIPTC NGRHCGDTWT LRDKNKPMLW TENWTQQFRA YGDQLAMRSA EDIAYAVLRF FAKGGSMVNY
301: YMYHGGTNFG RTSASYVLTG YYDEAPLDEY GMYKEPKFGH LRDLHNVIRS YQKAFLSGKH SSEILGHGYE AQIFELPEEN LCLSFLSNNN TGEDGTVIFR
401: GVKHYVPSRS VSILAGCKDV VYNTKRVFVQ HSERSYHTSE VTSKNNQWEM YSEMVPKYKD TKIRTKEPLE QYNQTKDASD YLWYTTSFRL ESDDLPFRGD
501: IRPVLQVKSS AHSMIGFAND AFVGSARGNK QVKGFMFEKP VDLKAGVNHV VLLSSTMGMK DSGGELAEVK GGIQECLIQG LNTGTLDLQV NGWGHKAALE
601: GEDKEIYSEK GVGKVQWKPA ENDRAATWYK RYFDEPDGDD PIVLDMSSMS KGMIFVNGEG IGRYWVSFRT LAGTPSQAVY HIPRPFLKPK DNLLVVFEEE
701: MGKPDGILVQ TVTRDDICLL ISEHNPGQIK TWDTDGVKIK LIAEDHSVRG TLMCPPEKII QEVVFASFGN PDGMCGNFTV GTCHTPNAKQ IVEKECLGKP
801: SCMLPVDHTV YGADINCQST TGTLGVQVRC RGGKKGA
Best Arabidopsis Sequence Match ( AT4G35010.1 )
(BLAST)
001: MRKHSLDRWL LTAVLVVLLS SSSSFAAKKD AKKKKKSNKE VTYDGTSLII DGKRELLYSG SIHYPRSTPE MWPSIIKRAK QGGLNTIQTY VFWNVHEPQQ
101: GKFNFSGRAD LVKFIKLIQK NGMYVTLRLG PFIQAEWTHG GLPYWLREVP GIFFRTDNKQ FKEHTERYVR MILDKMKEER LFASQGGPII LGQIENEYSA
201: VQRAYKQDGL NYIKWASNLV DSMKLGIPWV MCKQNDAPDP MINACNGRHC GDTFPGPNRE NKPSLWTENW TTQFRVFGDP PTQRSVEDIA YSVARFFSKN
301: GTHVNYYMYH GGTNFGRTSA HYVTTRYYDD APLDEYGLEK EPKYGHLKHL HNALNLCKKP LLWGQPKTEK PGKDTEIRYY EQPGTKTCAA FLANNNTEAA
401: ETIKFKGREY VIAPRSISIL PDCKTVVYNT AQIVSQHTSR NFMKSKKANK KFDFKVFTET LPSKLEGNSY IPVELYGLTK DKTDYGWYTT SFKVHKNHLP
501: TKKGVKTFVR IASLGHALHA WLNGEYLGSG HGSHEEKSFV FQKQVTLKAG ENHLVMLGVL TGFPDSGSYM EHRYTGPRGI SILGLTSGTL DLTESSKWGN
601: KIGMEGEKLG IHTEEGLKKV EWKKFTGKAP GLTWYQTYFD APESVSAATI RMHGMGKGLI WVNGEGVGRY WQSFLSPLGQ PTQIEYHIPR SFLKPKKNLL
701: VIFEEEPNVK PELMDFAIVN RDTVCSYVGE NYTPSVRHWT RKKDQVQAIT DNVSLTATLK CSGTKKIAAV EFASFGNPIG VCGNFTLGTC NAPVSKQVIE
801: KHCLGKAECV IPVNKSTFQQ DKKDSCKNVV KMLAVQVKCG RGKKN
Arabidopsis Description
BGAL11Beta-galactosidase 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCV1]
SUBAcon: [vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.