Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 4
- golgi 5
- nucleus 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Solyc01g111540.2.1 | Tomato | unclear | 96.91 | 94.34 |
PGSC0003DMT400031178 | Potato | vacuole | 80.72 | 78.77 |
VIT_03s0038g02360.t01 | Wine grape | extracellular, golgi | 63.29 | 61.46 |
KRH29286 | Soybean | extracellular, golgi, vacuole | 59.21 | 56.89 |
KRH24309 | Soybean | golgi, vacuole | 57.73 | 55.4 |
GSMUA_Achr1P14790_001 | Banana | vacuole | 56.37 | 55.27 |
KRH60700 | Soybean | extracellular, golgi, vacuole | 56.98 | 54.62 |
GSMUA_AchrUn_... | Banana | extracellular, vacuole | 54.76 | 54.29 |
GSMUA_Achr1P26480_001 | Banana | vacuole | 54.51 | 54.24 |
GSMUA_Achr4P05130_001 | Banana | golgi, plastid, vacuole | 55.25 | 53.28 |
AT2G16730.1 | Thale cress | extracellular, golgi, vacuole | 55.62 | 53.07 |
CDY31414 | Canola | cytosol, golgi, mitochondrion, peroxisome | 49.94 | 51.79 |
CDY70118 | Canola | cytosol | 37.95 | 51.68 |
TraesCS7D01G272600.1 | Wheat | golgi, vacuole | 53.28 | 51.31 |
CDX69103 | Canola | vacuole | 53.52 | 51.3 |
CDY40650 | Canola | vacuole | 53.52 | 51.3 |
CDX75479 | Canola | vacuole | 53.52 | 51.24 |
Bra001991.1-P | Field mustard | golgi, vacuole | 51.42 | 51.23 |
Bra017687.1-P | Field mustard | vacuole | 53.4 | 51.18 |
CDX72512 | Canola | vacuole | 53.4 | 51.18 |
Bra011577.1-P | Field mustard | vacuole | 53.4 | 51.12 |
Bra013052.1-P | Field mustard | golgi, vacuole | 53.4 | 51.06 |
AT4G35010.1 | Thale cress | vacuole | 53.15 | 50.89 |
HORVU7Hr1G057460.1 | Barley | golgi | 52.16 | 50.72 |
CDX72747 | Canola | vacuole | 55.13 | 50.34 |
KXG25431 | Sorghum | golgi | 52.66 | 50.24 |
Os08t0549200-01 | Rice | plasma membrane | 52.53 | 50.12 |
Zm00001d053225_P005 | Maize | golgi, vacuole | 52.04 | 49.76 |
TraesCS7A01G272400.2 | Wheat | vacuole | 52.41 | 49.71 |
TraesCS7B01G169700.1 | Wheat | vacuole | 53.28 | 49.48 |
Zm00001d032022_P003 | Maize | golgi, vacuole | 51.92 | 49.41 |
Os09t0539200-01 | Rice | vacuole | 26.7 | 48.43 |
KXG36088 | Sorghum | endoplasmic reticulum, golgi, vacuole | 49.07 | 47.43 |
TraesCS5B01G331300.1 | Wheat | golgi, vacuole | 48.58 | 46.84 |
TraesCS5A01G330900.1 | Wheat | endoplasmic reticulum, vacuole | 48.58 | 46.84 |
CDY22419 | Canola | cytosol | 55.13 | 46.65 |
Bra033571.1-P | Field mustard | cytosol | 55.13 | 46.65 |
HORVU7Hr1G009630.2 | Barley | cytosol | 39.55 | 46.44 |
PGSC0003DMT400023852 | Potato | extracellular | 35.97 | 46.26 |
PGSC0003DMT400023851 | Potato | nucleus, peroxisome, vacuole | 41.16 | 45.99 |
TraesCS5D01G336700.2 | Wheat | vacuole | 46.6 | 44.93 |
PGSC0003DMT400000899 | Potato | nucleus, peroxisome, vacuole | 36.34 | 43.88 |
CDY02241 | Canola | golgi, vacuole | 53.4 | 43.68 |
PGSC0003DMT400079498 | Potato | vacuole | 38.69 | 43.05 |
Zm00001d006243_P005 | Maize | endoplasmic reticulum, golgi, vacuole | 46.23 | 42.94 |
PGSC0003DMT400083896 | Potato | extracellular | 43.63 | 42.28 |
PGSC0003DMT400009496 | Potato | nucleus, peroxisome, vacuole | 28.06 | 41.96 |
PGSC0003DMT400012359 | Potato | golgi, vacuole | 43.26 | 41.67 |
PGSC0003DMT400057597 | Potato | golgi, vacuole | 35.35 | 41.27 |
PGSC0003DMT400006654 | Potato | golgi, vacuole | 42.52 | 41.05 |
AT4G38590.2 | Thale cress | golgi, vacuole | 53.28 | 40.97 |
Zm00001d022621_P005 | Maize | vacuole | 45.12 | 40.83 |
PGSC0003DMT400009096 | Potato | endoplasmic reticulum, golgi, vacuole | 42.27 | 40.47 |
CDX89744 | Canola | vacuole | 53.4 | 39.78 |
PGSC0003DMT400020941 | Potato | extracellular | 41.66 | 39.55 |
PGSC0003DMT400059880 | Potato | cytosol | 37.08 | 38.96 |
PGSC0003DMT400039333 | Potato | extracellular, golgi | 40.17 | 38.88 |
PGSC0003DMT400067956 | Potato | extracellular | 41.41 | 37.56 |
PGSC0003DMT400011458 | Potato | cytosol, nucleus, peroxisome | 19.65 | 35.57 |
Protein Annotations
KEGG:00052+3.2.1.23 | KEGG:00511+3.2.1.23 | KEGG:00531+3.2.1.23 | KEGG:00600+3.2.1.23 | KEGG:00604+3.2.1.23 | Gene3D:2.60.120.260 |
Gene3D:2.60.120.740 | MapMan:21.3.2.2.2 | Gene3D:3.20.20.80 | InterPro:BetaGal_jelly_roll_dom | ncoils:Coil | GO:GO:0003674 |
GO:GO:0003824 | GO:GO:0004553 | GO:GO:0004565 | GO:GO:0005488 | GO:GO:0005975 | GO:GO:0008150 |
GO:GO:0008152 | GO:GO:0016787 | GO:GO:0016798 | GO:GO:0030246 | InterPro:Galactose-bd-like_sf | InterPro:Gly_Hdrlase_35_cat |
InterPro:Glyco_hydro_35_CS | InterPro:Glycoside_Hdrlase_35 | InterPro:Glycoside_hydrolase_SF | InterPro:IPR000922 | InterPro:IPR008979 | InterPro:Lectin_gal-bd_dom |
UniProt:M1A6P4 | PFAM:PF01301 | PFAM:PF02140 | PFAM:PF13364 | EnsemblPlantsGene:PGSC0003DMG400006191 | PGSC:PGSC0003DMG400006191 |
EnsemblPlants:PGSC0003DMT400015841 | PRINTS:PR00742 | ScanProsite:PS01182 | PFscan:PS50228 | PANTHER:PTHR23421 | PANTHER:PTHR23421:SF52 |
SUPFAM:SSF49785 | SUPFAM:SSF51445 | SignalP:SignalP-noTM | UniParc:UPI000296E8E5 | SEG:seg | : |
Description
Beta-galactosidase [Source:PGSC_GENE;Acc:PGSC0003DMG400006191]
Coordinates
chr1:+:87524941..87529189
Molecular Weight (calculated)
91062.6 Da
IEP (calculated)
7.681
GRAVY (calculated)
-0.359
Length
809 amino acids
Sequence
(BLAST)
(BLAST)
001: MFQILTLALL ISLLVTSVNG DEKPRGVAYD GRSLIVNGNR ELFFSGSIHY TRSPPEMWPE IIRKAKEGGI YNFEGNFDIV KFIKEIAEQG LYVTLRIGPY
101: IEAEWSSGGF PYWLREVKNI TFRSYNEPFV YHMKKYSEMV IDLMKKEKLF APQGGPIILA QIENEYNNVQ AAYKENGKKY IEWAANMAVG LYDGVPWIMC
201: KQKEAPPTVI NTCNGRHCAD TFTGPNGPNK PTLWTENWTA QYRTFGDPPS QRSAEDLAFS VARFFAKNGT LTNYYMYHGG TNFGRSSSSF VTTRYYDEAP
301: LDEFGLMRDP KWSHLRDLHR ALRLSRRALL WGTPTVQKIN QDLEITVYEN TAEHMCAAFL TNNHTTQPSN ITFRGAAYYL PEKSVSILAD CKTVVYNTQT
401: VVSQHNSRNF VPSEKAKNLK WEMYQEKVPT ISELALKNRE PLELYSLTKD KSDYAWYSTS INLNRHDLPM RSDILTVLQV ASMGHALAAF VNGQYVGFGH
501: GNNIDKSFVF RQPVVLKPGV NDITLLVLQN SGAYMEKRFA GPRAVTLQGL MAGTLDITLN VWGHEVGVSG EKEQVFTEEG AKKVKWTPVT GTPPGPVTWY
601: KTYFDAPEGT DPVALKMDQM QKGMLWVNGK SLGRYWVSFL SPLGQPTQSE YHVPRAFLKP NNNLLVVFEE TGGHPAKIEI VTVNRDTICS MITEYHPPNV
701: KNFESSGSKF CPVVEDLKAG AHLTCPDDNV IEKVEFASYG DPDGACGNFT MGTCTSQNSI KVAEKYCLGK HTCTIPIERV TFDEPNKDPC PNIFKTLAVQ
801: VKCVVPNKN
101: IEAEWSSGGF PYWLREVKNI TFRSYNEPFV YHMKKYSEMV IDLMKKEKLF APQGGPIILA QIENEYNNVQ AAYKENGKKY IEWAANMAVG LYDGVPWIMC
201: KQKEAPPTVI NTCNGRHCAD TFTGPNGPNK PTLWTENWTA QYRTFGDPPS QRSAEDLAFS VARFFAKNGT LTNYYMYHGG TNFGRSSSSF VTTRYYDEAP
301: LDEFGLMRDP KWSHLRDLHR ALRLSRRALL WGTPTVQKIN QDLEITVYEN TAEHMCAAFL TNNHTTQPSN ITFRGAAYYL PEKSVSILAD CKTVVYNTQT
401: VVSQHNSRNF VPSEKAKNLK WEMYQEKVPT ISELALKNRE PLELYSLTKD KSDYAWYSTS INLNRHDLPM RSDILTVLQV ASMGHALAAF VNGQYVGFGH
501: GNNIDKSFVF RQPVVLKPGV NDITLLVLQN SGAYMEKRFA GPRAVTLQGL MAGTLDITLN VWGHEVGVSG EKEQVFTEEG AKKVKWTPVT GTPPGPVTWY
601: KTYFDAPEGT DPVALKMDQM QKGMLWVNGK SLGRYWVSFL SPLGQPTQSE YHVPRAFLKP NNNLLVVFEE TGGHPAKIEI VTVNRDTICS MITEYHPPNV
701: KNFESSGSKF CPVVEDLKAG AHLTCPDDNV IEKVEFASYG DPDGACGNFT MGTCTSQNSI KVAEKYCLGK HTCTIPIERV TFDEPNKDPC PNIFKTLAVQ
801: VKCVVPNKN
001: MKIHSSDHSW LLLAVLVILL SFSGALSSDD KEKKTKSVDK KKEVTYDGTS LIINGNRELL YSGSIHYPRS TPEMWPNIIK RAKQGGLNTI QTYVFWNVHE
101: PEQGKFNFSG RADLVKFIKL IEKNGLYVTL RLGPFIQAEW THGGLPYWLR EVPGIFFRTD NEPFKEHTER YVKVVLDMMK EEKLFASQGG PIILGQIENE
201: YSAVQRAYKE DGLNYIKWAS KLVHSMDLGI PWVMCKQNDA PDPMINACNG RHCGDTFPGP NKDNKPSLWT ENWTTQFRVF GDPPAQRSVE DIAYSVARFF
301: SKNGTHVNYY MYHGGTNFGR TSAHYVTTRY YDDAPLDEFG LEREPKYGHL KHLHNALNLC KKALLWGQPR VEKPSNETEI RYYEQPGTKV CAAFLANNNT
401: EAAEKIKFRG KEYLIPHRSI SILPDCKTVV YNTGEIISHH TSRNFMKSKK ANKNFDFKVF TESVPSKIKG DSFIPVELYG LTKDESDYGW YTTSFKIDDN
501: DLSKKKGGKP NLRIASLGHA LHVWLNGEYL GNGHGSHEEK SFVFQKPVTL KEGENHLTML GVLTGFPDSG SYMEHRYTGP RSVSILGLGS GTLDLTEENK
601: WGNKVGMEGE RLGIHAEEGL KKVKWEKASG KEPGMTWYQT YFDAPESQSA AAIRMNGMGK GLIWVNGEGV GRYWMSFLSP LGQPTQIEYH IPRSFLKPKK
701: NLLVIFEEEP NVKPELIDFV IVNRDTVCSY IGENYTPSVR HWTRKNDQVQ AITDDVHLTA NLKCSGTKKI SAVEFASFGN PNGTCGNFTL GSCNAPVSKK
801: VVEKYCLGKA ECVIPVNKST FEQDKKDSCP KVEKKLAVQV KCGRDKKN
101: PEQGKFNFSG RADLVKFIKL IEKNGLYVTL RLGPFIQAEW THGGLPYWLR EVPGIFFRTD NEPFKEHTER YVKVVLDMMK EEKLFASQGG PIILGQIENE
201: YSAVQRAYKE DGLNYIKWAS KLVHSMDLGI PWVMCKQNDA PDPMINACNG RHCGDTFPGP NKDNKPSLWT ENWTTQFRVF GDPPAQRSVE DIAYSVARFF
301: SKNGTHVNYY MYHGGTNFGR TSAHYVTTRY YDDAPLDEFG LEREPKYGHL KHLHNALNLC KKALLWGQPR VEKPSNETEI RYYEQPGTKV CAAFLANNNT
401: EAAEKIKFRG KEYLIPHRSI SILPDCKTVV YNTGEIISHH TSRNFMKSKK ANKNFDFKVF TESVPSKIKG DSFIPVELYG LTKDESDYGW YTTSFKIDDN
501: DLSKKKGGKP NLRIASLGHA LHVWLNGEYL GNGHGSHEEK SFVFQKPVTL KEGENHLTML GVLTGFPDSG SYMEHRYTGP RSVSILGLGS GTLDLTEENK
601: WGNKVGMEGE RLGIHAEEGL KKVKWEKASG KEPGMTWYQT YFDAPESQSA AAIRMNGMGK GLIWVNGEGV GRYWMSFLSP LGQPTQIEYH IPRSFLKPKK
701: NLLVIFEEEP NVKPELIDFV IVNRDTVCSY IGENYTPSVR HWTRKNDQVQ AITDDVHLTA NLKCSGTKKI SAVEFASFGN PNGTCGNFTL GSCNAPVSKK
801: VVEKYCLGKA ECVIPVNKST FEQDKKDSCP KVEKKLAVQV KCGRDKKN
Arabidopsis Description
BGAL13Beta-galactosidase 13 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCU9]
SUBAcon: [golgi,extracellular,vacuole]
SUBAcon: [golgi,extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.