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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, golgi, vacuole

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 4
  • golgi 5
  • nucleus 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc01g111540.2.1 Tomato unclear 96.91 94.34
PGSC0003DMT400031178 Potato vacuole 80.72 78.77
VIT_03s0038g02360.t01 Wine grape extracellular, golgi 63.29 61.46
KRH29286 Soybean extracellular, golgi, vacuole 59.21 56.89
KRH24309 Soybean golgi, vacuole 57.73 55.4
GSMUA_Achr1P14790_001 Banana vacuole 56.37 55.27
KRH60700 Soybean extracellular, golgi, vacuole 56.98 54.62
GSMUA_AchrUn_... Banana extracellular, vacuole 54.76 54.29
GSMUA_Achr1P26480_001 Banana vacuole 54.51 54.24
GSMUA_Achr4P05130_001 Banana golgi, plastid, vacuole 55.25 53.28
AT2G16730.1 Thale cress extracellular, golgi, vacuole 55.62 53.07
CDY31414 Canola cytosol, golgi, mitochondrion, peroxisome 49.94 51.79
CDY70118 Canola cytosol 37.95 51.68
TraesCS7D01G272600.1 Wheat golgi, vacuole 53.28 51.31
CDX69103 Canola vacuole 53.52 51.3
CDY40650 Canola vacuole 53.52 51.3
CDX75479 Canola vacuole 53.52 51.24
Bra001991.1-P Field mustard golgi, vacuole 51.42 51.23
Bra017687.1-P Field mustard vacuole 53.4 51.18
CDX72512 Canola vacuole 53.4 51.18
Bra011577.1-P Field mustard vacuole 53.4 51.12
Bra013052.1-P Field mustard golgi, vacuole 53.4 51.06
AT4G35010.1 Thale cress vacuole 53.15 50.89
HORVU7Hr1G057460.1 Barley golgi 52.16 50.72
CDX72747 Canola vacuole 55.13 50.34
KXG25431 Sorghum golgi 52.66 50.24
Os08t0549200-01 Rice plasma membrane 52.53 50.12
Zm00001d053225_P005 Maize golgi, vacuole 52.04 49.76
TraesCS7A01G272400.2 Wheat vacuole 52.41 49.71
TraesCS7B01G169700.1 Wheat vacuole 53.28 49.48
Zm00001d032022_P003 Maize golgi, vacuole 51.92 49.41
Os09t0539200-01 Rice vacuole 26.7 48.43
KXG36088 Sorghum endoplasmic reticulum, golgi, vacuole 49.07 47.43
TraesCS5B01G331300.1 Wheat golgi, vacuole 48.58 46.84
TraesCS5A01G330900.1 Wheat endoplasmic reticulum, vacuole 48.58 46.84
CDY22419 Canola cytosol 55.13 46.65
Bra033571.1-P Field mustard cytosol 55.13 46.65
HORVU7Hr1G009630.2 Barley cytosol 39.55 46.44
PGSC0003DMT400023852 Potato extracellular 35.97 46.26
PGSC0003DMT400023851 Potato nucleus, peroxisome, vacuole 41.16 45.99
TraesCS5D01G336700.2 Wheat vacuole 46.6 44.93
PGSC0003DMT400000899 Potato nucleus, peroxisome, vacuole 36.34 43.88
CDY02241 Canola golgi, vacuole 53.4 43.68
PGSC0003DMT400079498 Potato vacuole 38.69 43.05
Zm00001d006243_P005 Maize endoplasmic reticulum, golgi, vacuole 46.23 42.94
PGSC0003DMT400083896 Potato extracellular 43.63 42.28
PGSC0003DMT400009496 Potato nucleus, peroxisome, vacuole 28.06 41.96
PGSC0003DMT400012359 Potato golgi, vacuole 43.26 41.67
PGSC0003DMT400057597 Potato golgi, vacuole 35.35 41.27
PGSC0003DMT400006654 Potato golgi, vacuole 42.52 41.05
AT4G38590.2 Thale cress golgi, vacuole 53.28 40.97
Zm00001d022621_P005 Maize vacuole 45.12 40.83
PGSC0003DMT400009096 Potato endoplasmic reticulum, golgi, vacuole 42.27 40.47
CDX89744 Canola vacuole 53.4 39.78
PGSC0003DMT400020941 Potato extracellular 41.66 39.55
PGSC0003DMT400059880 Potato cytosol 37.08 38.96
PGSC0003DMT400039333 Potato extracellular, golgi 40.17 38.88
PGSC0003DMT400067956 Potato extracellular 41.41 37.56
PGSC0003DMT400011458 Potato cytosol, nucleus, peroxisome 19.65 35.57
Protein Annotations
KEGG:00052+3.2.1.23KEGG:00511+3.2.1.23KEGG:00531+3.2.1.23KEGG:00600+3.2.1.23KEGG:00604+3.2.1.23Gene3D:2.60.120.260
Gene3D:2.60.120.740MapMan:21.3.2.2.2Gene3D:3.20.20.80InterPro:BetaGal_jelly_roll_domncoils:CoilGO:GO:0003674
GO:GO:0003824GO:GO:0004553GO:GO:0004565GO:GO:0005488GO:GO:0005975GO:GO:0008150
GO:GO:0008152GO:GO:0016787GO:GO:0016798GO:GO:0030246InterPro:Galactose-bd-like_sfInterPro:Gly_Hdrlase_35_cat
InterPro:Glyco_hydro_35_CSInterPro:Glycoside_Hdrlase_35InterPro:Glycoside_hydrolase_SFInterPro:IPR000922InterPro:IPR008979InterPro:Lectin_gal-bd_dom
UniProt:M1A6P4PFAM:PF01301PFAM:PF02140PFAM:PF13364EnsemblPlantsGene:PGSC0003DMG400006191PGSC:PGSC0003DMG400006191
EnsemblPlants:PGSC0003DMT400015841PRINTS:PR00742ScanProsite:PS01182PFscan:PS50228PANTHER:PTHR23421PANTHER:PTHR23421:SF52
SUPFAM:SSF49785SUPFAM:SSF51445SignalP:SignalP-noTMUniParc:UPI000296E8E5SEG:seg:
Description
Beta-galactosidase [Source:PGSC_GENE;Acc:PGSC0003DMG400006191]
Coordinates
chr1:+:87524941..87529189
Molecular Weight (calculated)
91062.6 Da
IEP (calculated)
7.681
GRAVY (calculated)
-0.359
Length
809 amino acids
Sequence
(BLAST)
001: MFQILTLALL ISLLVTSVNG DEKPRGVAYD GRSLIVNGNR ELFFSGSIHY TRSPPEMWPE IIRKAKEGGI YNFEGNFDIV KFIKEIAEQG LYVTLRIGPY
101: IEAEWSSGGF PYWLREVKNI TFRSYNEPFV YHMKKYSEMV IDLMKKEKLF APQGGPIILA QIENEYNNVQ AAYKENGKKY IEWAANMAVG LYDGVPWIMC
201: KQKEAPPTVI NTCNGRHCAD TFTGPNGPNK PTLWTENWTA QYRTFGDPPS QRSAEDLAFS VARFFAKNGT LTNYYMYHGG TNFGRSSSSF VTTRYYDEAP
301: LDEFGLMRDP KWSHLRDLHR ALRLSRRALL WGTPTVQKIN QDLEITVYEN TAEHMCAAFL TNNHTTQPSN ITFRGAAYYL PEKSVSILAD CKTVVYNTQT
401: VVSQHNSRNF VPSEKAKNLK WEMYQEKVPT ISELALKNRE PLELYSLTKD KSDYAWYSTS INLNRHDLPM RSDILTVLQV ASMGHALAAF VNGQYVGFGH
501: GNNIDKSFVF RQPVVLKPGV NDITLLVLQN SGAYMEKRFA GPRAVTLQGL MAGTLDITLN VWGHEVGVSG EKEQVFTEEG AKKVKWTPVT GTPPGPVTWY
601: KTYFDAPEGT DPVALKMDQM QKGMLWVNGK SLGRYWVSFL SPLGQPTQSE YHVPRAFLKP NNNLLVVFEE TGGHPAKIEI VTVNRDTICS MITEYHPPNV
701: KNFESSGSKF CPVVEDLKAG AHLTCPDDNV IEKVEFASYG DPDGACGNFT MGTCTSQNSI KVAEKYCLGK HTCTIPIERV TFDEPNKDPC PNIFKTLAVQ
801: VKCVVPNKN
Best Arabidopsis Sequence Match ( AT2G16730.1 )
(BLAST)
001: MKIHSSDHSW LLLAVLVILL SFSGALSSDD KEKKTKSVDK KKEVTYDGTS LIINGNRELL YSGSIHYPRS TPEMWPNIIK RAKQGGLNTI QTYVFWNVHE
101: PEQGKFNFSG RADLVKFIKL IEKNGLYVTL RLGPFIQAEW THGGLPYWLR EVPGIFFRTD NEPFKEHTER YVKVVLDMMK EEKLFASQGG PIILGQIENE
201: YSAVQRAYKE DGLNYIKWAS KLVHSMDLGI PWVMCKQNDA PDPMINACNG RHCGDTFPGP NKDNKPSLWT ENWTTQFRVF GDPPAQRSVE DIAYSVARFF
301: SKNGTHVNYY MYHGGTNFGR TSAHYVTTRY YDDAPLDEFG LEREPKYGHL KHLHNALNLC KKALLWGQPR VEKPSNETEI RYYEQPGTKV CAAFLANNNT
401: EAAEKIKFRG KEYLIPHRSI SILPDCKTVV YNTGEIISHH TSRNFMKSKK ANKNFDFKVF TESVPSKIKG DSFIPVELYG LTKDESDYGW YTTSFKIDDN
501: DLSKKKGGKP NLRIASLGHA LHVWLNGEYL GNGHGSHEEK SFVFQKPVTL KEGENHLTML GVLTGFPDSG SYMEHRYTGP RSVSILGLGS GTLDLTEENK
601: WGNKVGMEGE RLGIHAEEGL KKVKWEKASG KEPGMTWYQT YFDAPESQSA AAIRMNGMGK GLIWVNGEGV GRYWMSFLSP LGQPTQIEYH IPRSFLKPKK
701: NLLVIFEEEP NVKPELIDFV IVNRDTVCSY IGENYTPSVR HWTRKNDQVQ AITDDVHLTA NLKCSGTKKI SAVEFASFGN PNGTCGNFTL GSCNAPVSKK
801: VVEKYCLGKA ECVIPVNKST FEQDKKDSCP KVEKKLAVQV KCGRDKKN
Arabidopsis Description
BGAL13Beta-galactosidase 13 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCU9]
SUBAcon: [golgi,extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.