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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 3
  • mitochondrion 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, secretory
BaCelLo:nucleus
EpiLoc:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
TargetP:secretory
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra033571.1-P Field mustard cytosol 100.0 100.0
CDX72747 Canola vacuole 90.59 97.74
CDY31414 Canola cytosol, golgi, mitochondrion, peroxisome 54.71 67.05
CDX75479 Canola vacuole 58.47 66.15
CDX69103 Canola vacuole 58.26 66.0
AT4G38590.2 Thale cress golgi, vacuole 72.59 65.97
CDY40650 Canola vacuole 58.16 65.88
CDX72512 Canola vacuole 58.05 65.76
CDY70118 Canola cytosol 40.27 64.81
CDY02241 Canola golgi, vacuole 58.79 56.83
VIT_03s0038g02360.t01 Wine grape extracellular, golgi 49.37 56.66
PGSC0003DMT400031178 Potato vacuole 48.85 56.33
Solyc10g055470.1.1 Tomato vacuole 48.54 55.97
Solyc01g111540.2.1 Tomato unclear 48.33 55.6
KRH29286 Soybean extracellular, golgi, vacuole 48.74 55.34
KRH24309 Soybean golgi, vacuole 48.74 55.28
PGSC0003DMT400015841 Potato endoplasmic reticulum, golgi, vacuole 46.65 55.13
KRH60700 Soybean extracellular, golgi, vacuole 48.54 54.98
GSMUA_AchrUn_... Banana extracellular, vacuole 46.34 54.29
GSMUA_Achr1P26480_001 Banana vacuole 45.61 53.63
Os09t0539200-01 Rice vacuole 24.48 52.47
CDX76255 Canola extracellular 7.01 52.34
CDX88594 Canola golgi, vacuole 17.78 52.31
GSMUA_Achr1P14790_001 Banana vacuole 44.98 52.12
CDX89744 Canola vacuole 58.79 51.75
TraesCS7D01G272600.1 Wheat golgi, vacuole 44.67 50.83
Zm00001d053225_P005 Maize golgi, vacuole 44.77 50.59
HORVU7Hr1G057460.1 Barley golgi 43.93 50.48
Os08t0549200-01 Rice plasma membrane 44.56 50.24
KXG25431 Sorghum golgi 44.35 50.0
TraesCS7A01G272400.2 Wheat vacuole 44.35 49.71
Zm00001d032022_P003 Maize golgi, vacuole 44.14 49.65
GSMUA_Achr4P05130_001 Banana golgi, plastid, vacuole 43.41 49.46
CDX98327 Canola golgi, vacuole 12.87 49.0
TraesCS7B01G169700.1 Wheat vacuole 44.35 48.68
KXG36088 Sorghum endoplasmic reticulum, golgi, vacuole 42.36 48.39
TraesCS5A01G330900.1 Wheat endoplasmic reticulum, vacuole 42.15 48.03
TraesCS5B01G331300.1 Wheat golgi, vacuole 42.05 47.91
CDX84445 Canola vacuole 34.73 46.11
TraesCS5D01G336700.2 Wheat vacuole 39.75 45.29
CDY39845 Canola vacuole 34.1 45.28
HORVU7Hr1G009630.2 Barley cytosol 32.53 45.14
CDY31349 Canola vacuole 34.41 44.4
Zm00001d006243_P005 Maize endoplasmic reticulum, golgi, vacuole 40.27 44.2
CDX95380 Canola vacuole 32.95 43.33
CDX94367 Canola mitochondrion 32.11 43.12
CDY70160 Canola vacuole 24.16 42.39
CDY53959 Canola golgi, vacuole 31.9 41.78
CDX97513 Canola golgi, vacuole 36.61 41.67
CDY47949 Canola golgi, vacuole 31.8 41.64
Zm00001d022621_P005 Maize vacuole 38.91 41.61
CDY51738 Canola golgi, vacuole 36.51 41.6
CDY37486 Canola golgi, vacuole 36.51 41.6
CDY36028 Canola plastid 30.96 41.57
CDY20708 Canola golgi, vacuole 31.38 41.55
CDY23637 Canola golgi, vacuole 36.4 41.48
CDY32919 Canola golgi, vacuole 31.28 41.41
CDY11899 Canola golgi, vacuole 31.28 41.41
CDY43756 Canola cytosol, nucleus, peroxisome 22.07 41.37
CDX92753 Canola golgi, vacuole 30.65 41.15
CDX89360 Canola mitochondrion 30.02 41.06
CDY43757 Canola golgi, vacuole 31.8 41.03
CDX76254 Canola golgi, nucleus, vacuole 25.21 40.99
CDY42755 Canola vacuole 30.44 40.87
CDX84446 Canola golgi, vacuole 31.59 40.76
CDY59693 Canola vacuole 36.3 40.54
CDY15749 Canola golgi, vacuole 35.77 40.52
CDY04567 Canola golgi, vacuole 35.98 40.47
CDX69219 Canola vacuole 34.83 40.41
CDX75569 Canola golgi, vacuole 34.94 40.39
CDX83288 Canola golgi, vacuole 35.36 40.0
CDY31204 Canola golgi, vacuole 35.25 39.93
CDY65885 Canola vacuole 33.58 39.1
CDX67790 Canola vacuole 33.26 39.02
CDY28339 Canola vacuole 32.01 38.83
CDY34975 Canola golgi, plasma membrane, vacuole 31.9 38.71
CDY23785 Canola vacuole 35.77 38.3
CDX93659 Canola vacuole 32.74 38.26
CDY19166 Canola golgi, vacuole 35.36 38.06
CDY69031 Canola cytosol, plastid, vacuole 23.01 35.43
CDY32304 Canola cytosol 32.11 34.81
CDY69471 Canola cytosol 14.54 33.41
CDY70594 Canola cytosol 14.44 33.17
CDY59725 Canola cytosol 10.25 31.41
CDY59691 Canola cytosol, nucleus, vacuole 11.4 30.97
CDY53917 Canola plastid 31.8 29.54
CDX67763 Canola golgi, plasma membrane, vacuole 23.33 28.92
Protein Annotations
KEGG:00052+3.2.1.23KEGG:00511+3.2.1.23KEGG:00531+3.2.1.23KEGG:00600+3.2.1.23KEGG:00604+3.2.1.23Gene3D:2.60.120.260
Gene3D:2.60.120.740MapMan:21.3.2.2.2Gene3D:3.20.20.80GO:A0A078GAL7UniProt:A0A078GAL7EnsemblPlants:CDY22419
ProteinID:CDY22419ProteinID:CDY22419.1ncoils:CoilGO:GO:0003674GO:GO:0003824GO:GO:0004553
GO:GO:0004565GO:GO:0005488GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0016787
GO:GO:0016798GO:GO:0030246EnsemblPlantsGene:GSBRNA2T00018913001InterPro:Galactose-bd-like_sfInterPro:Gly_Hdrlase_35_catInterPro:Glyco_hydro_35_CS
InterPro:Glycoside_Hdrlase_35InterPro:Glycoside_hydrolase_SFInterPro:IPR000922InterPro:IPR008979InterPro:Lectin_gal-bd_domPFAM:PF01301
PFAM:PF02140PRINTS:PR00742ScanProsite:PS01182PFscan:PS50228PANTHER:PTHR23421PANTHER:PTHR23421:SF52
MetaCyc:PWY-6807SUPFAM:SSF49785SUPFAM:SSF51445UniParc:UPI000253F94CSEG:seg:
Description
BnaA06g37410DBeta-galactosidase [Source:UniProtKB/TrEMBL;Acc:A0A078GAL7]
Coordinates
chrLK032130:-:636959..641718
Molecular Weight (calculated)
109681.0 Da
IEP (calculated)
8.970
GRAVY (calculated)
-0.689
Length
956 amino acids
Sequence
(BLAST)
001: MNSLHVNKVI FAGDFEDLFG AVLRPQAWPS FLFQRDEFIR SVAGIEEWRV RVVKNETNRG ASFIADSVNR HRLVQSYVAA GPPSWLVEFF ESYAKEEKDD
101: DENNKKKNKK GVTYDGTSLI INGKRELLYS GSVHYPRSTP DMWPSIIEKA RVGRLNTIQT YVFWNVHEPE QGKWDFKGRF DLVKFIKLIH EKGLYVTIRL
201: GPFIQAEWNH GGLPVWLREV PDVYFRTDNE PFKEHTERYV RKILGILKEE KLFASQGGPI ILGQIENEYN AVRLAYKENG ERYIKWAANL VESMNLGIPW
301: VMCKQDNAPG NIINACNGRH CGDTFPGPKR PDMPSLWTEN WTTQFRVFGD PTTNRRSEDI AFAVSRFFSK NGSHVNYYMY HGGTNFGRTS AHFVTTRYYD
401: HAPLDEYGME KDPKYGHLKH VHRALELCKK ALLWGHPRFQ KLGPDTEVRY YEQPGTNVCA AFLANNNTRE PNTVKFKGQK FVLPSRSISI LPDCKTVVYN
501: TAQIVAQHSW RNFVKSEKSS KGLKFDMYSE NVPSKLEGDT LIPGELYYLT KDKTDYAWYT TSIKIKEDDL PDKKGVKTIL RVASLGHAAI VYVNGEYVGN
601: KHGSHEMKSF VFKKPVKLKP GDNHISILGV LTGFPDSGSY MEKRFAGPRG ASIIGLKSGE RDLTENNHWG HLAGLEGEKK EVYTEQGSKK VKWVKNGERK
701: PLTWYKTYFE TPEGENTVAI RMNGMGKGLI WVNGIGIGRY WMSFLSPTGQ PTQSEYHIPR TFMKKKEKNM LVIFEEEPGV KLEAIDFVLV NRDTICSFVE
801: ENYPASVKYW KRQGPNIVPR NKDMRLKSLI KCPPGKQIVS VEFASFGDPT GTCGNFTMGK CSASKSKEVV EKKCLGKSRC SIVVERETFE DKKCQDIVKT
901: LAVQVKCEKK QGNEQKHKRE DAEEEDDDEE EEEEEEKERE GNNQDLKDRE KRKQDH
Best Arabidopsis Sequence Match ( AT4G38590.1 )
(BLAST)
001: MWPSIIDKAR IGGLNTIQTY VFWNVHEPEQ GKYDFKGRFD LVKFIKLIHE KGLYVTLRLG PFIQAEWNHG GLPYWLREVP DVYFRTNNEP FKEHTERYVR
101: KILGMMKEEK LFASQGGPII LGQIENEYNA VQLAYKENGE KYIKWAANLV ESMNLGIPWV MCKQNDAPGN LINACNGRHC GDTFPGPNRH DKPSLWTENW
201: TTQFRVFGDP PTQRTVEDIA FSVARYFSKN GSHVNYYMYH GGTNFGRTSA HFVTTRYYDD APLDEFGLEK APKYGHLKHV HRALRLCKKA LFWGQLRAQT
301: LGPDTEVRYY EQPGTKVCAA FLSNNNTRDT NTIKFKGQDY VLPSRSISIL PDCKTVVYNT AQIVAQHSWR DFVKSEKTSK GLKFEMFSEN IPSLLDGDSL
401: IPGELYYLTK DKTDYAWYTT SVKIDEDDFP DQKGLKTILR VASLGHALIV YVNGEYAGKA HGRHEMKSFE FAKPVNFKTG DNRISILGVL TGLPDSGSYM
501: EHRFAGPRAI SIIGLKSGTR DLTENNEWGH LAGLEGEKKE VYTEEGSKKV KWEKDGKRKP LTWYKTYFET PEGVNAVAIR MKAMGKGLIW VNGIGVGRYW
601: MSFLSPLGEP TQTEYHIPRS FMKGEKKKNM LVILEEEPGV KLESIDFVLV NRDTICSNVG EDYPVSVKSW KREGPKIVSR SKDMRLKAVM RCPPEKQMVE
701: VQFASFGDPT GTCGNFTMGK CSASKSKEVV EKECLGRNYC SIVVARETFG DKGCPEIVKT LAVQVKCEKK EGKQDEKKKK EDKDEEEEDD EDDDEEEEEE
801: DKENKDTKDM ENKNQDM
Arabidopsis Description
BGAL14Beta-galactosidase [Source:UniProtKB/TrEMBL;Acc:F4JUE3]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.