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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi, vacuole

Predictor Summary:
  • plastid 2
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 5
  • plasma membrane 4
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:golgi, vacuole
Any Predictor:plastid, secretory
BaCelLo:plastid
iPSORT:secretory
MultiLoc:vacuole
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY69471 Canola cytosol 57.06 99.04
CDX88594 Canola golgi, vacuole 44.46 98.77
Bra006850.1-P Field mustard golgi, vacuole 98.61 98.61
CDY70594 Canola cytosol 56.79 98.56
AT5G56870.1 Thale cress vacuole 91.14 90.88
CDY32919 Canola golgi, vacuole 90.58 90.58
CDY20708 Canola golgi, vacuole 89.75 89.75
CDX76255 Canola extracellular 14.96 84.38
CDX94367 Canola mitochondrion 79.78 80.9
CDY42755 Canola vacuole 78.95 80.06
CDX92753 Canola golgi, vacuole 78.53 79.63
CDX95380 Canola vacuole 79.5 78.95
CDX76254 Canola golgi, nucleus, vacuole 63.43 77.89
CDX89360 Canola mitochondrion 74.65 77.11
PGSC0003DMT400000899 Potato nucleus, peroxisome, vacuole 64.82 69.85
KRH37385 Soybean nucleus 69.53 69.63
KRH12385 Soybean vacuole 69.11 69.21
Solyc12g008840.1.1 Tomato extracellular 68.84 68.65
GSMUA_Achr7P08970_001 Banana vacuole 66.48 65.75
GSMUA_Achr6P00880_001 Banana golgi, vacuole 66.48 65.4
GSMUA_Achr7P08960_001 Banana endoplasmic reticulum, golgi, vacuole 65.93 64.67
GSMUA_Achr7P08950_001 Banana golgi, vacuole 65.37 64.13
GSMUA_Achr7P08940_001 Banana vacuole 64.68 63.8
Os06t0573600-01 Rice plasma membrane, vacuole 62.6 63.22
Zm00001d046357_P001 Maize extracellular 62.88 62.88
TraesCS7B01G264200.1 Wheat plasma membrane, vacuole 62.47 62.81
EER88554 Sorghum golgi, vacuole 62.88 62.62
TraesCS7D01G359500.1 Wheat golgi 62.05 62.48
TraesCS6A01G185400.1 Wheat golgi, vacuole 62.33 62.15
TraesCS7A01G363600.1 Wheat plasma membrane, vacuole 61.63 61.98
CDX98327 Canola golgi, vacuole 21.47 61.75
TraesCS6D01G172400.1 Wheat golgi, vacuole 61.91 61.66
TraesCS6B01G214100.1 Wheat golgi, vacuole 61.77 61.52
HORVU7Hr1G086690.2 Barley plasma membrane, vacuole 62.6 60.51
KRH19154 Soybean golgi, mitochondrion, plastid, vacuole 70.22 60.43
EES06516 Sorghum mitochondrion, plastid 61.5 60.0
KRH02714 Soybean golgi, vacuole 69.67 59.95
CDY36028 Canola plastid 58.59 59.41
VIT_11s0016g02200.t01 Wine grape vacuole 68.7 59.33
Os02t0219200-01 Rice peroxisome, vacuole 41.0 59.2
CDY53959 Canola golgi, vacuole 59.7 59.04
CDY47949 Canola golgi, vacuole 59.42 58.77
HORVU6Hr1G039490.6 Barley plastid 62.05 58.64
GSMUA_Achr2P16780_001 Banana plastid 66.9 57.43
CDY23637 Canola golgi, vacuole 66.48 57.21
CDX97513 Canola golgi, vacuole 66.48 57.14
CDY51738 Canola golgi, vacuole 65.93 56.73
CDY37486 Canola golgi, vacuole 65.37 56.26
Os01t0580200-01 Rice golgi, vacuole 63.99 55.86
Zm00001d044290_P005 Maize golgi, vacuole 63.85 55.54
OQU87043 Sorghum golgi, vacuole 63.57 55.5
HORVU3Hr1G050450.12 Barley golgi, vacuole 63.57 55.23
GSMUA_Achr6P35850_001 Banana golgi, vacuole 62.74 54.98
TraesCS3A01G208600.1 Wheat plastid 63.57 54.97
TraesCS3D01G211500.2 Wheat golgi, vacuole 63.3 54.73
TraesCS3B01G235100.1 Wheat golgi, vacuole 63.16 54.48
Zm00001d053585_P002 Maize plastid 61.36 53.44
CDX75569 Canola golgi, vacuole 59.0 51.51
CDX69219 Canola vacuole 58.59 51.34
CDY43757 Canola golgi, vacuole 52.22 50.88
CDX84446 Canola golgi, vacuole 52.08 50.74
CDY59693 Canola vacuole 60.11 50.7
CDY70160 Canola vacuole 37.81 50.09
CDY39845 Canola vacuole 47.23 47.36
CDY15749 Canola golgi, vacuole 54.99 47.04
CDY31204 Canola golgi, vacuole 54.43 46.56
CDX83288 Canola golgi, vacuole 54.02 46.15
CDY31349 Canola vacuole 47.23 46.02
CDY04567 Canola golgi, vacuole 54.16 46.0
CDX84445 Canola vacuole 45.57 45.69
PGSC0003DMT400011458 Potato cytosol, nucleus, peroxisome 28.12 45.41
CDX93659 Canola vacuole 49.31 43.52
CDY65885 Canola vacuole 49.45 43.48
CDX67790 Canola vacuole 48.62 43.07
CDY28339 Canola vacuole 46.95 43.02
CDY34975 Canola golgi, plasma membrane, vacuole 46.95 43.02
CDY43756 Canola cytosol, nucleus, peroxisome 30.33 42.94
CDY59725 Canola cytosol 18.28 42.31
CDY23785 Canola vacuole 51.8 41.88
CDY19166 Canola golgi, vacuole 51.25 41.67
CDY32304 Canola cytosol 46.54 38.1
CDY69031 Canola cytosol, plastid, vacuole 32.27 37.52
CDX75479 Canola vacuole 42.52 36.33
CDY31414 Canola cytosol, golgi, mitochondrion, peroxisome 39.06 36.15
CDX69103 Canola vacuole 42.24 36.14
CDY40650 Canola vacuole 41.55 35.55
CDX72512 Canola vacuole 41.41 35.43
CDY59691 Canola cytosol, nucleus, vacuole 17.17 35.23
CDX67763 Canola golgi, plasma membrane, vacuole 36.57 34.24
CDX72747 Canola vacuole 41.41 33.75
CDY53917 Canola plastid 45.98 32.26
CDY22419 Canola cytosol 41.41 31.28
CDY70118 Canola cytosol 25.48 30.98
CDY02241 Canola golgi, vacuole 41.83 30.54
CDX89744 Canola vacuole 41.83 27.81
Protein Annotations
KEGG:00052+3.2.1.23KEGG:00511+3.2.1.23KEGG:00531+3.2.1.23KEGG:00600+3.2.1.23KEGG:00604+3.2.1.23Gene3D:2.60.120.260
MapMan:21.3.2.2.2Gene3D:3.20.20.80GO:A0A078FG05UniProt:A0A078FG05EnsemblPlants:CDY11899ProteinID:CDY11899
ProteinID:CDY11899.1GO:GO:0003674GO:GO:0003824GO:GO:0004553GO:GO:0004565GO:GO:0005975
GO:GO:0008150GO:GO:0008152GO:GO:0016787GO:GO:0016798EnsemblPlantsGene:GSBRNA2T00060738001InterPro:Galactose-bd-like_sf
InterPro:Gly_Hdrlase_35_catInterPro:Glyco_hydro_35_CSInterPro:Glycoside_Hdrlase_35InterPro:Glycoside_hydrolase_SFInterPro:IPR008979PFAM:PF01301
PRINTS:PR00742ScanProsite:PS01182PANTHER:PTHR23421PANTHER:PTHR23421:SF63MetaCyc:PWY-6807SUPFAM:SSF49785
SUPFAM:SSF51445SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0004EF27E5::
Description
BnaC03g13250DBeta-galactosidase [Source:UniProtKB/TrEMBL;Acc:A0A078FG05]
Coordinates
chrLK032015:-:328686..332960
Molecular Weight (calculated)
81222.7 Da
IEP (calculated)
9.125
GRAVY (calculated)
-0.309
Length
722 amino acids
Sequence
(BLAST)
001: MGSSFRDKAW IFLMFLCYSS LICSVKATVS YDRKAVIING QRRILLSGSI HYPRSTPEMW PGLIQKAKEG GLDVIETYVF WNGHEPSPGN YYFGDRYDLV
101: KFIKLVHQAG LYVNLRIGPY VCAEWNFGGF PVWLKFVPGM AFRTDNEPFK AAMKKFTEKI VWMMKAEKLF QTQGGPIILA QIENEYGPVE WEIGAPGKAY
201: TKWVAQMALG LSTGVPWIMC KQEDAPSPII DTCNGYYCEN FKPNSNNKPK MWTENWTGWY TEFGGAVPYR PVEDIAYSVA RFIQNGGSFV NYYMYHGGTN
301: FDRTAGEFMA SSYDYDAPLD EYGLTREPKY SHLKALHKVI KLSEPALVSA DATVTYLGAK QEAHVFWSKS SCAAFLSNND ANSAARVMFR GFPYDLPPWS
401: VSILPDCKTE YYNTAKVNAP RIHRTMVPTG TRFSWESFNE ATPSANERDT FARNGLVEQI SMTWDKSDYF WYLTDITIGA GERFLKTGDY PLLTIWSAGH
501: ALHVFVNGQL AGSAYGGLSH PKLTFSQKIK LHAGVNKLAL LSVAVGLPNV GQHFETWNKG VLGPVTLKGV NSGTWDMSKW KWSYKIGVKG EAMSLHTDSS
601: SVSWNQGSYV VKKQPLTWYK STFSAPGGNE PLALDMNTMG KGHVWINGRN IGRHWPAYKA QGNCRRCNYA GTFDAKKCLS NCGEASQRWY HVPRSWLKSQ
701: NLIVVFEEWG GDPSGISLVK RT
Best Arabidopsis Sequence Match ( AT5G56870.1 )
(BLAST)
001: MVLNFRDKSC IFLAILCCLS LSCIVKASVS YDRKAVIING QRRILLSGSI HYPRSTPEMW PGLIQKAKEG GLDVIETYVF WNGHEPSPGQ YYFGDRYDLV
101: KFIKLVHQAG LYVNLRIGPY VCAEWNFGGF PVWLKFVPGM AFRTDNEPFK AAMKKFTEKI VWMMKAEKLF QTQGGPIILA QIENEYGPVE WEIGAPGKAY
201: TKWVAQMALG LSTGVPWIMC KQEDAPGPII DTCNGYYCED FKPNSINKPK MWTENWTGWY TDFGGAVPYR PVEDIAYSVA RFIQKGGSLV NYYMYHGGTN
301: FDRTAGEFMA SSYDYDAPLD EYGLPREPKY SHLKALHKAI KLSEPALLSA DATVTSLGAK QEAYVFWSKS SCAAFLSNKD ENSAARVLFR GFPYDLPPWS
401: VSILPDCKTE VYNTAKVNAP SVHRNMVPTG TKFSWGSFNE ATPTANEAGT FARNGLVEQI SMTWDKSDYF WYITDITIGS GETFLKTGDS PLLTVMSAGH
501: ALHVFVNGQL SGTAYGGLDH PKLTFSQKIK LHAGVNKIAL LSVAVGLPNV GTHFEQWNKG VLGPVTLKGV NSGTWDMSKW KWSYKIGVKG EALSLHTNTE
601: SSGVRWTQGS FVAKKQPLTW YKSTFATPAG NEPLALDMNT MGKGQVWING RNIGRHWPAY KAQGSCGRCN YAGTFDAKKC LSNCGEASQR WYHVPRSWLK
701: SQNLIVVFEE LGGDPNGISL VKRT
Arabidopsis Description
BGAL4Beta-galactosidase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCV8]
SUBAcon: [vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.