Subcellular Localization
min:
: max
Winner_takes_all: golgi, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 4
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| TraesCS3A01G099400.1 | |
| TraesCS3B01G115800.1 | |
| TraesCS3D01G099700.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G13750.1 | TraesCS3A01G099400.1 | AT2G01950.1 | 19000166 |
| AT3G13750.1 | TraesCS3B01G115800.1 | AT2G01950.1 | 19000166 |
| AT3G13750.1 | TraesCS3D01G099700.1 | AT2G01950.1 | 19000166 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G185400.1 | Wheat | golgi, vacuole | 98.21 | 98.34 |
| TraesCS6D01G172400.1 | Wheat | golgi, vacuole | 96.83 | 96.83 |
| HORVU6Hr1G039490.6 | Barley | plastid | 96.55 | 91.62 |
| Os02t0219200-01 | Rice | peroxisome, vacuole | 61.1 | 88.6 |
| EES06516 | Sorghum | mitochondrion, plastid | 88.14 | 86.35 |
| TraesCS7B01G264200.1 | Wheat | plasma membrane, vacuole | 81.52 | 82.31 |
| Zm00001d053585_P002 | Maize | plastid | 85.93 | 75.15 |
| GSMUA_Achr7P08970_001 | Banana | vacuole | 71.86 | 71.37 |
| GSMUA_Achr6P00880_001 | Banana | golgi, vacuole | 71.59 | 70.71 |
| GSMUA_Achr7P08960_001 | Banana | endoplasmic reticulum, golgi, vacuole | 71.03 | 69.97 |
| GSMUA_Achr7P08950_001 | Banana | golgi, vacuole | 70.62 | 69.57 |
| GSMUA_Achr7P08940_001 | Banana | vacuole | 70.07 | 69.4 |
| CDX88594 | Canola | golgi, vacuole | 30.9 | 68.92 |
| CDX76255 | Canola | extracellular | 12.14 | 68.75 |
| PGSC0003DMT400000899 | Potato | nucleus, peroxisome, vacuole | 60.97 | 65.97 |
| KRH37385 | Soybean | nucleus | 65.38 | 65.74 |
| KRH12385 | Soybean | vacuole | 65.24 | 65.6 |
| Solyc12g008840.1.1 | Tomato | extracellular | 65.1 | 65.19 |
| Bra019644.1-P | Field mustard | golgi, plastid, vacuole | 62.9 | 64.04 |
| CDX94367 | Canola | mitochondrion | 62.76 | 63.9 |
| CDX95380 | Canola | vacuole | 63.31 | 63.14 |
| GSMUA_Achr2P16780_001 | Banana | plastid | 72.28 | 62.31 |
| AT5G56870.1 | Thale cress | vacuole | 62.21 | 62.29 |
| Bra013956.1-P | Field mustard | cytosol, mitochondrion, plastid, vacuole | 62.76 | 62.16 |
| CDY11899 | Canola | golgi, vacuole | 61.52 | 61.77 |
| Bra006850.1-P | Field mustard | golgi, vacuole | 61.38 | 61.63 |
| CDX76254 | Canola | golgi, nucleus, vacuole | 49.79 | 61.39 |
| CDX89360 | Canola | mitochondrion | 59.17 | 61.37 |
| CDY32919 | Canola | golgi, vacuole | 60.69 | 60.94 |
| CDX92753 | Canola | golgi, vacuole | 59.72 | 60.81 |
| Bra035634.1-P | Field mustard | golgi, vacuole | 60.55 | 60.8 |
| CDY20708 | Canola | golgi, vacuole | 60.41 | 60.66 |
| CDY42755 | Canola | vacuole | 59.31 | 60.39 |
| Bra019120.1-P | Field mustard | golgi, vacuole | 59.17 | 60.25 |
| AT4G26140.7 | Thale cress | vacuole | 61.93 | 59.63 |
| Bra027403.1-P | Field mustard | golgi, vacuole | 67.31 | 58.16 |
| CDY23637 | Canola | golgi, vacuole | 67.17 | 58.05 |
| VIT_09s0002g02120.t01 | Wine grape | golgi, vacuole | 67.31 | 58.03 |
| CDX97513 | Canola | golgi, vacuole | 67.17 | 57.98 |
| TraesCS3B01G235100.1 | Wheat | golgi, vacuole | 66.9 | 57.95 |
| AT3G52840.2 | Thale cress | golgi, vacuole | 62.21 | 57.75 |
| CDY51738 | Canola | golgi, vacuole | 66.62 | 57.57 |
| KRH44153 | Soybean | nucleus | 66.9 | 57.53 |
| AT3G13750.1 | Thale cress | golgi, vacuole | 67.17 | 57.5 |
| CDY37486 | Canola | golgi, vacuole | 66.48 | 57.45 |
| KRH47126 | Soybean | nucleus | 66.9 | 57.4 |
| KRH10007 | Soybean | nucleus | 66.34 | 57.26 |
| KRH23324 | Soybean | vacuole | 65.93 | 56.84 |
| Solyc03g121540.2.1 | Tomato | nucleus | 65.38 | 56.56 |
| CDY70594 | Canola | cytosol | 32.41 | 56.49 |
| CDY69471 | Canola | cytosol | 32.41 | 56.49 |
| PGSC0003DMT400006654 | Potato | golgi, vacuole | 65.24 | 56.44 |
| Solyc06g062580.2.1 | Tomato | nucleus | 65.24 | 56.24 |
| Bra021506.1-P | Field mustard | vacuole | 66.76 | 56.21 |
| PGSC0003DMT400012359 | Potato | golgi, vacuole | 64.83 | 55.95 |
| PGSC0003DMT400083896 | Potato | extracellular | 64.41 | 55.93 |
| Solyc12g044880.1.1 | Tomato | golgi, vacuole | 64.28 | 55.81 |
| KRH02714 | Soybean | golgi, vacuole | 64.41 | 55.66 |
| KRH19154 | Soybean | golgi, mitochondrion, plastid, vacuole | 64.28 | 55.54 |
| VIT_11s0016g02200.t01 | Wine grape | vacuole | 63.31 | 54.9 |
| TraesCS4B01G280900.1 | Wheat | golgi, vacuole | 60.83 | 52.19 |
| TraesCS4B01G220500.1 | Wheat | golgi | 55.31 | 47.01 |
| PGSC0003DMT400011458 | Potato | cytosol, nucleus, peroxisome | 26.76 | 43.4 |
| TraesCS3B01G418400.2 | Wheat | vacuole | 50.34 | 43.25 |
| TraesCS3B01G418300.2 | Wheat | vacuole | 49.38 | 41.72 |
| TraesCS5B01G142600.1 | Wheat | unclear | 51.45 | 40.94 |
| TraesCS1B01G030400.1 | Wheat | vacuole | 45.93 | 40.07 |
| TraesCS1B01G278400.1 | Wheat | plastid | 45.38 | 39.93 |
| TraesCS3B01G418200.1 | Wheat | vacuole | 43.45 | 37.82 |
| TraesCS7B01G169700.1 | Wheat | vacuole | 43.45 | 36.17 |
| TraesCS5B01G331300.1 | Wheat | golgi, vacuole | 40.28 | 34.8 |
Protein Annotations
| KEGG:00052+3.2.1.23 | KEGG:00511+3.2.1.23 | KEGG:00531+3.2.1.23 | KEGG:00600+3.2.1.23 | KEGG:00604+3.2.1.23 | Gene3D:2.60.120.260 |
| MapMan:21.3.2.2.2 | Gene3D:3.20.20.80 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005975 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 | InterPro:Galactose-bd-like_sf | InterPro:Gly_Hdrlase_35_cat | InterPro:Glyco_hydro_35_CS |
| InterPro:Glycoside_Hdrlase_35 | InterPro:Glycoside_hydrolase_SF | InterPro:IPR008979 | PFAM:PF01301 | PRINTS:PR00742 | ScanProsite:PS01182 |
| PANTHER:PTHR23421 | PANTHER:PTHR23421:SF70 | SUPFAM:SSF49785 | SUPFAM:SSF51445 | SignalP:SignalP-noTM | TMHMM:TMhelix |
| EnsemblPlantsGene:TraesCS6B01G214100 | EnsemblPlants:TraesCS6B01G214100.1 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr6B:-:289528400..289532580
Molecular Weight (calculated)
80254.4 Da
IEP (calculated)
9.420
GRAVY (calculated)
-0.303
Length
725 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPPLVAGGG LLLAAFLAFS LAASSANAAV SYDHRSLVIN GRRRILISGS IHYPRSTPEM WPGLIQKAKD GGLDVIQTYV FWNGHEPVKG QYYFSDRYDL
101: VRFVKLAKQA GLYVHLRIGP YVCAEWNFGG FPVWLKYVPG ISFRTDNGPF KAEMQRFVEK IVSMMKSERL FEWQGGPIIM TQVENEFGPM ESVGGSGAKP
201: YANWAAKMAV ATNTGVPWVM CKQEDAPDTV INTCNGFYCD YFTPNKKNKP TMWTEAWTGW FTSFGGAVPH RPVEDMAFAV ARFIQKGGSF VNYYMYHGGT
301: NFGRTAGGPF IATSYDYDAP IDEYGLLRQP KWGHLRDLHK AIKQAEPVLV SGDPTVQSLG NYEKAYVFKS KNGACAAAFL SNYHMNAAVK VRFNGRHYDL
401: PAWSISILPD CKTAVFNTAT VKEPTLLPKM HLVVRFAWQS YSEDTNSLDG SAFTKNGLVE QLSMTWDKSD YLWYTTYVNI GANELSKNGQ WPQLTIYSAG
501: HSMQVFVNGK SYGSVYGGYN NPKLTYDGHV KMWQGSNKIS ILSSAVGLPN DGNHFERWNV GVLGPVTVSG LNSGKRDLSH QKWTYQVGLK GESLGLHTVT
601: GSSSVEWGGP GNRQPLTWHK ALFTAPAGSD PVALDMGSMG KGQMWVNGHH VGRYWSYKAP SGGCGRCSYA GTYRQDKCRS NCGQLSQRWY HVPRSWLKPG
701: GNLLVVLEEY GGDLAGVAMA TRRTT
101: VRFVKLAKQA GLYVHLRIGP YVCAEWNFGG FPVWLKYVPG ISFRTDNGPF KAEMQRFVEK IVSMMKSERL FEWQGGPIIM TQVENEFGPM ESVGGSGAKP
201: YANWAAKMAV ATNTGVPWVM CKQEDAPDTV INTCNGFYCD YFTPNKKNKP TMWTEAWTGW FTSFGGAVPH RPVEDMAFAV ARFIQKGGSF VNYYMYHGGT
301: NFGRTAGGPF IATSYDYDAP IDEYGLLRQP KWGHLRDLHK AIKQAEPVLV SGDPTVQSLG NYEKAYVFKS KNGACAAAFL SNYHMNAAVK VRFNGRHYDL
401: PAWSISILPD CKTAVFNTAT VKEPTLLPKM HLVVRFAWQS YSEDTNSLDG SAFTKNGLVE QLSMTWDKSD YLWYTTYVNI GANELSKNGQ WPQLTIYSAG
501: HSMQVFVNGK SYGSVYGGYN NPKLTYDGHV KMWQGSNKIS ILSSAVGLPN DGNHFERWNV GVLGPVTVSG LNSGKRDLSH QKWTYQVGLK GESLGLHTVT
601: GSSSVEWGGP GNRQPLTWHK ALFTAPAGSD PVALDMGSMG KGQMWVNGHH VGRYWSYKAP SGGCGRCSYA GTYRQDKCRS NCGQLSQRWY HVPRSWLKPG
701: GNLLVVLEEY GGDLAGVAMA TRRTT
001: MGTTILVLSK ILTFLLTTML IGSSVIQCSS VTYDKKAIVI NGHRRILLSG SIHYPRSTPE MWEDLIKKAK DGGLDVIDTY VFWNGHEPSP GTYNFEGRYD
101: LVRFIKTIQE VGLYVHLRIG PYVCAEWNFG GFPVWLKYVD GISFRTDNGP FKSAMQGFTE KIVQMMKEHR FFASQGGPII LSQIENEFEP DLKGLGPAGH
201: SYVNWAAKMA VGLNTGVPWV MCKEDDAPDP IINTCNGFYC DYFTPNKPYK PTMWTEAWSG WFTEFGGTVP KRPVEDLAFG VARFIQKGGS YINYYMYHGG
301: TNFGRTAGGP FITTSYDYDA PIDEYGLVQE PKYSHLKQLH QAIKQCEAAL VSSDPHVTKL GNYEEAHVFT AGKGSCVAFL TNYHMNAPAK VVFNNRHYTL
401: PAWSISILPD CRNVVFNTAT VAAKTSHVQM VPSGSILYSV ARYDEDIATY GNRGTITARG LLEQVNVTRD TTDYLWYTTS VDIKASESFL RGGKWPTLTV
501: DSAGHAVHVF VNGHFYGSAF GTRENRKFSF SSQVNLRGGA NKIALLSVAV GLPNVGPHFE TWATGIVGSV VLHGLDEGNK DLSWQKWTYQ AGLRGESMNL
601: VSPTEDSSVD WIKGSLAKQN KQPLTWYKAY FDAPRGNEPL ALDLKSMGKG QAWINGQSIG RYWMAFAKGD CGSCNYAGTY RQNKCQSGCG EPTQRWYHVP
701: RSWLKPKGNL LVLFEELGGD ISKVSVVKRS VN
101: LVRFIKTIQE VGLYVHLRIG PYVCAEWNFG GFPVWLKYVD GISFRTDNGP FKSAMQGFTE KIVQMMKEHR FFASQGGPII LSQIENEFEP DLKGLGPAGH
201: SYVNWAAKMA VGLNTGVPWV MCKEDDAPDP IINTCNGFYC DYFTPNKPYK PTMWTEAWSG WFTEFGGTVP KRPVEDLAFG VARFIQKGGS YINYYMYHGG
301: TNFGRTAGGP FITTSYDYDA PIDEYGLVQE PKYSHLKQLH QAIKQCEAAL VSSDPHVTKL GNYEEAHVFT AGKGSCVAFL TNYHMNAPAK VVFNNRHYTL
401: PAWSISILPD CRNVVFNTAT VAAKTSHVQM VPSGSILYSV ARYDEDIATY GNRGTITARG LLEQVNVTRD TTDYLWYTTS VDIKASESFL RGGKWPTLTV
501: DSAGHAVHVF VNGHFYGSAF GTRENRKFSF SSQVNLRGGA NKIALLSVAV GLPNVGPHFE TWATGIVGSV VLHGLDEGNK DLSWQKWTYQ AGLRGESMNL
601: VSPTEDSSVD WIKGSLAKQN KQPLTWYKAY FDAPRGNEPL ALDLKSMGKG QAWINGQSIG RYWMAFAKGD CGSCNYAGTY RQNKCQSGCG EPTQRWYHVP
701: RSWLKPKGNL LVLFEELGGD ISKVSVVKRS VN
Arabidopsis Description
BGAL5Beta-galactosidase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9MAJ7]
SUBAcon: [golgi,vacuole]
SUBAcon: [golgi,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.